RNA–Protein interactions for RNA: ENST00000530882.1

SOX13-208, Transcript of SRY-box 13, human

TSL 3

Gene SOX13, Length 769 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX13-208	ENST00000530882	CANX	P27824	592 aa	Known RBP	28.84	■■■□□ 2.21
SOX13-208	ENST00000530882	ADAMTS8	Q9UP79	889 aa		28.84	■■■□□ 2.21
SOX13-208	ENST00000530882	VIRMA	Q69YN4	1812 aa	Known RBP	28.83	■■■□□ 2.21
SOX13-208	ENST00000530882	SNRPA1	P09661	255 aa	Known RBP	28.83	■■■□□ 2.21
SOX13-208	ENST00000530882	TMPO	P42166	694 aa	Known RBP	28.83	■■■□□ 2.21
SOX13-208	ENST00000530882	CCDC146	Q8IYE0	955 aa		28.83	■■■□□ 2.21
SOX13-208	ENST00000530882	SRP68	Q9UHB9	627 aa	Known RBP	28.83	■■■□□ 2.21
SOX13-208	ENST00000530882	COL15A1	P39059	1388 aa		28.83	■■■□□ 2.21
SOX13-208	ENST00000530882	UBR2	Q8IWV8	1755 aa		28.83	■■■□□ 2.21
SOX13-208	ENST00000530882	NLGN2	Q8NFZ4	835 aa		28.82	■■■□□ 2.2
SOX13-208	ENST00000530882	SIPA1L3	O60292	1781 aa	Predicted RBP	28.82	■■■□□ 2.2
SOX13-208	ENST00000530882		A0A087WZG4	1122 aa		28.81	■■■□□ 2.2
SOX13-208	ENST00000530882	ANP32C	O43423	234 aa		28.81	■■■□□ 2.2
SOX13-208	ENST00000530882	NPM2	Q86SE8	214 aa	Known RBP	28.81	■■■□□ 2.2
SOX13-208	ENST00000530882	THUMPD2	Q9BTF0	503 aa	Known RBP	28.81	■■■□□ 2.2
SOX13-208	ENST00000530882	MIS18A	Q9NYP9	233 aa		28.8	■■■□□ 2.2
SOX13-208	ENST00000530882	NARF	Q9UHQ1	456 aa		28.8	■■■□□ 2.2
SOX13-208	ENST00000530882	PARP3	Q9Y6F1	533 aa		28.8	■■■□□ 2.2
SOX13-208	ENST00000530882	MYH14	Q7Z406	1995 aa	Known RBP	28.8	■■■□□ 2.2
SOX13-208	ENST00000530882	EIF5	P55010	431 aa	Known RBP	28.79	■■■□□ 2.2
SOX13-208	ENST00000530882	GPR162	Q16538	588 aa		28.79	■■■□□ 2.2
SOX13-208	ENST00000530882	IL6ST	P40189	918 aa	Predicted RBP	28.78	■■■□□ 2.2
SOX13-208	ENST00000530882	FKBP8	Q14318	412 aa		28.78	■■■□□ 2.2
SOX13-208	ENST00000530882	USPL1	Q5W0Q7	1092 aa		28.78	■■■□□ 2.2
SOX13-208	ENST00000530882	RRP7A	Q9Y3A4	280 aa	Known RBP	28.77	■■■□□ 2.2
SOX13-208	ENST00000530882	USP16	Q9Y5T5	823 aa		28.77	■■■□□ 2.2
SOX13-208	ENST00000530882	A1BG	P04217	495 aa		28.76	■■■□□ 2.19
SOX13-208	ENST00000530882	NEUROD2	Q15784	382 aa		28.76	■■■□□ 2.19
SOX13-208	ENST00000530882	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.76	■■■□□ 2.19
SOX13-208	ENST00000530882	PELP1	Q8IZL8	1130 aa	Known RBP	28.75	■■■□□ 2.19
SOX13-208	ENST00000530882	PRAMEF22	A3QJZ6	481 aa		28.73	■■■□□ 2.19
SOX13-208	ENST00000530882	BABAM1	Q9NWV8	329 aa		28.73	■■■□□ 2.19
SOX13-208	ENST00000530882	TSPYL4	Q9UJ04	414 aa		28.73	■■■□□ 2.19
SOX13-208	ENST00000530882	EIF4A1	P60842	406 aa	Known RBP	28.72	■■■□□ 2.19
SOX13-208	ENST00000530882	C4A	P0C0L4	1744 aa		28.71	■■■□□ 2.19
SOX13-208	ENST00000530882	TM4SF1	P30408	202 aa		28.7	■■■□□ 2.18
SOX13-208	ENST00000530882	GIGYF1	O75420	1035 aa	Predicted RBP	28.69	■■■□□ 2.18
SOX13-208	ENST00000530882	TGFB2	P61812	414 aa		28.68	■■■□□ 2.18
SOX13-208	ENST00000530882	DDR1	Q08345	913 aa		28.68	■■■□□ 2.18
SOX13-208	ENST00000530882	BCL2L12	Q9HB09	334 aa		28.68	■■■□□ 2.18
SOX13-208	ENST00000530882	TBC1D2B	Q9UPU7	963 aa		28.68	■■■□□ 2.18
SOX13-208	ENST00000530882	POLRMT	O00411	1230 aa	Known RBP	28.67	■■■□□ 2.18
SOX13-208	ENST00000530882	GRIN3B	O60391	1043 aa		28.67	■■■□□ 2.18
SOX13-208	ENST00000530882	YY1	P25490	414 aa		28.67	■■■□□ 2.18
SOX13-208	ENST00000530882	NFIX	Q14938	502 aa		28.67	■■■□□ 2.18
SOX13-208	ENST00000530882	TRIM35	Q9UPQ4	493 aa		28.67	■■■□□ 2.18
SOX13-208	ENST00000530882	C10orf71	Q711Q0	1435 aa		28.67	■■■□□ 2.18
SOX13-208	ENST00000530882	MRS2	Q9HD23	443 aa		28.66	■■■□□ 2.18
SOX13-208	ENST00000530882	DLG5	Q8TDM6	1919 aa		28.66	■■■□□ 2.18
SOX13-208	ENST00000530882	APAF1	O14727	1248 aa		28.65	■■■□□ 2.18
SOX13-208	ENST00000530882	PIP4K2A	P48426	406 aa	Predicted RBP	28.65	■■■□□ 2.18
SOX13-208	ENST00000530882	CCDC184	Q52MB2	194 aa		28.65	■■■□□ 2.18
SOX13-208	ENST00000530882	DZIP3	Q86Y13	1208 aa	Known RBP	28.65	■■■□□ 2.18
SOX13-208	ENST00000530882	YBX3	P16989	372 aa	Known RBP eCLIP	28.63	■■■□□ 2.17
SOX13-208	ENST00000530882	NBPF26	B4DH59	902 aa		28.62	■■■□□ 2.17
SOX13-208	ENST00000530882	NBPF10	Q6P3W6	841 aa	Known RBP	28.62	■■■□□ 2.17
SOX13-208	ENST00000530882	NBPF15	Q8N660	670 aa		28.62	■■■□□ 2.17
SOX13-208	ENST00000530882	CHL1	O00533	1208 aa		28.61	■■■□□ 2.17
SOX13-208	ENST00000530882	CAMTA2	O94983	1202 aa		28.61	■■■□□ 2.17
SOX13-208	ENST00000530882	BICDL1	Q6ZP65	573 aa		28.61	■■■□□ 2.17
SOX13-208	ENST00000530882	LAS1L	Q9Y4W2	734 aa	Known RBP	28.61	■■■□□ 2.17
SOX13-208	ENST00000530882	SERPINB2	P05120	415 aa		28.6	■■■□□ 2.17
SOX13-208	ENST00000530882	CALD1	Q05682	793 aa	Known RBP	28.6	■■■□□ 2.17
SOX13-208	ENST00000530882	ZNF652	Q9Y2D9	606 aa		28.6	■■■□□ 2.17
SOX13-208	ENST00000530882	KDM3B	Q7LBC6	1761 aa		28.6	■■■□□ 2.17
SOX13-208	ENST00000530882	PXDNL	A1KZ92	1463 aa		28.59	■■■□□ 2.17
SOX13-208	ENST00000530882	TBC1D9B	Q66K14	1250 aa		28.59	■■■□□ 2.17
SOX13-208	ENST00000530882		A0A0G2JLW4	131 aa		28.58	■■■□□ 2.17
SOX13-208	ENST00000530882	CLEC4G	Q6UXB4	293 aa		28.58	■■■□□ 2.17
SOX13-208	ENST00000530882	ERBB4	Q15303	1308 aa		28.58	■■■□□ 2.17
SOX13-208	ENST00000530882	RGL2	O15211	777 aa		28.57	■■■□□ 2.16
SOX13-208	ENST00000530882	DPEP1	P16444	411 aa		28.57	■■■□□ 2.16
SOX13-208	ENST00000530882	SETDB2	Q96T68	719 aa		28.57	■■■□□ 2.16
SOX13-208	ENST00000530882	WWC3	Q9ULE0	1092 aa		28.57	■■■□□ 2.16
SOX13-208	ENST00000530882	CFAP44	Q96MT7	982 aa		28.56	■■■□□ 2.16
SOX13-208	ENST00000530882	CARMIL3	Q8ND23	1372 aa		28.55	■■■□□ 2.16
SOX13-208	ENST00000530882	UTRN	P46939	3433 aa		28.55	■■■□□ 2.16
SOX13-208	ENST00000530882	EIF2S2	P20042	333 aa	Known RBP	28.53	■■■□□ 2.16
SOX13-208	ENST00000530882	NGEF	Q8N5V2	710 aa		28.53	■■■□□ 2.16
SOX13-208	ENST00000530882	MYL6B	P14649	208 aa		28.52	■■■□□ 2.16
SOX13-208	ENST00000530882	KIF6	Q6ZMV9	814 aa		28.52	■■■□□ 2.16
SOX13-208	ENST00000530882	PIM2	Q9P1W9	311 aa		28.52	■■■□□ 2.16
SOX13-208	ENST00000530882	BCS1L	Q9Y276	419 aa		28.52	■■■□□ 2.16
SOX13-208	ENST00000530882	SCN7A	Q01118	1682 aa		28.51	■■■□□ 2.16
SOX13-208	ENST00000530882	NPHP1	O15259	732 aa		28.51	■■■□□ 2.15
SOX13-208	ENST00000530882	GNAI1	P63096	354 aa		28.51	■■■□□ 2.15
SOX13-208	ENST00000530882	IFT57	Q9NWB7	429 aa		28.51	■■■□□ 2.15
SOX13-208	ENST00000530882	LAMB4	A4D0S4	1761 aa		28.5	■■■□□ 2.15
SOX13-208	ENST00000530882	KIF13B	Q9NQT8	1826 aa		28.49	■■■□□ 2.15
SOX13-208	ENST00000530882	ERVV-1	B6SEH8	477 aa		28.49	■■■□□ 2.15
SOX13-208	ENST00000530882	HOXB7	P09629	217 aa		28.49	■■■□□ 2.15
SOX13-208	ENST00000530882	KCNA3	P22001	575 aa		28.48	■■■□□ 2.15
SOX13-208	ENST00000530882	CHRNA5	P30532	468 aa		28.48	■■■□□ 2.15
SOX13-208	ENST00000530882	CNBD1	Q8NA66	436 aa		28.48	■■■□□ 2.15
SOX13-208	ENST00000530882	ZNF853	P0CG23	659 aa		28.47	■■■□□ 2.15
SOX13-208	ENST00000530882	ST5	P78524	1137 aa		28.47	■■■□□ 2.15
SOX13-208	ENST00000530882	CCDC27	Q2M243	656 aa		28.47	■■■□□ 2.15
SOX13-208	ENST00000530882	DALRD3	Q5D0E6	543 aa	Known RBP	28.47	■■■□□ 2.15
SOX13-208	ENST00000530882	PRR5L	Q6MZQ0	368 aa		28.47	■■■□□ 2.15
SOX13-208	ENST00000530882	MBIP	Q9NS73	344 aa		28.47	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms