RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 PI4K2BQ8TCG2 481 aa15.37■□□□□ 0.05
CLINT1-210ENST00000530742 DBF4Q9UBU7 674 aaPredicted RBP15.37■□□□□ 0.05
CLINT1-210ENST00000530742 BRPF3Q9ULD4 1205 aa15.37■□□□□ 0.05
CLINT1-210ENST00000530742 ST18O60284 1047 aa15.36■□□□□ 0.05
CLINT1-210ENST00000530742 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
CLINT1-210ENST00000530742 EXOC6BQ9Y2D4 811 aa15.36■□□□□ 0.05
CLINT1-210ENST00000530742 HSP90AB4PQ58FF6 505 aa15.36■□□□□ 0.05
CLINT1-210ENST00000530742 FAM43AQ8N2R8 423 aa15.36■□□□□ 0.05
CLINT1-210ENST00000530742 ERBB3P21860 1342 aa15.36■□□□□ 0.05
CLINT1-210ENST00000530742 NUP188Q5SRE5 1749 aa15.36■□□□□ 0.05
CLINT1-210ENST00000530742 C19orf44Q9H6X5 657 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 TTC41PQ6P2S7 1318 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 KDM6AO15550 1401 aaPredicted RBP15.35■□□□□ 0.05
CLINT1-210ENST00000530742 ABCA3Q99758 1704 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 CPDO75976 1380 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 BTBD11A6QL63 1104 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 ZNF530Q6P9A1 599 aaPredicted RBP15.35■□□□□ 0.05
CLINT1-210ENST00000530742 SPRYD3Q8NCJ5 442 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 ANKRD24Q8TF21 1146 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 HDAC5Q9UQL6 1122 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 INTS4Q96HW7 963 aaKnown RBP15.35■□□□□ 0.05
CLINT1-210ENST00000530742 CHPF2Q9P2E5 772 aa15.35■□□□□ 0.05
CLINT1-210ENST00000530742 MRE11P49959 708 aa15.34■□□□□ 0.05
CLINT1-210ENST00000530742 KIF1BPQ96EK5 621 aa15.34■□□□□ 0.05
CLINT1-210ENST00000530742 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
CLINT1-210ENST00000530742 SHANK3Q9BYB0 1731 aa15.34■□□□□ 0.05
CLINT1-210ENST00000530742 GOLGA6L3A6NEY3 463 aa15.34■□□□□ 0.05
CLINT1-210ENST00000530742 XRCC6P12956 609 aaKnown RBP eCLIP15.33■□□□□ 0.05
CLINT1-210ENST00000530742 PPP1R42Q7Z4L9 355 aa15.33■□□□□ 0.05
CLINT1-210ENST00000530742 LTV1Q96GA3 475 aaPredicted RBP15.33■□□□□ 0.05
CLINT1-210ENST00000530742 AFDNP55196 1824 aaKnown RBP15.33■□□□□ 0.05
CLINT1-210ENST00000530742 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.04
CLINT1-210ENST00000530742 SNRKQ9NRH2 765 aa15.33■□□□□ 0.04
CLINT1-210ENST00000530742 KLHL40Q2TBA0 621 aa15.33■□□□□ 0.04
CLINT1-210ENST00000530742 KSR2Q6VAB6 950 aa15.33■□□□□ 0.04
CLINT1-210ENST00000530742 KRT28Q7Z3Y7 464 aa15.33■□□□□ 0.04
CLINT1-210ENST00000530742 KCNB2Q92953 911 aa15.33■□□□□ 0.04
CLINT1-210ENST00000530742 HYPKQ9NX55 129 aa15.33■□□□□ 0.04
CLINT1-210ENST00000530742 BAG4O95429 457 aaKnown RBP15.32■□□□□ 0.04
CLINT1-210ENST00000530742 TMEM94Q12767 1356 aa15.32■□□□□ 0.04
CLINT1-210ENST00000530742 KCNQ3O43525 872 aa15.32■□□□□ 0.04
CLINT1-210ENST00000530742 TEFQ10587 303 aa15.32■□□□□ 0.04
CLINT1-210ENST00000530742 TNS3Q68CZ2 1445 aa15.32■□□□□ 0.04
CLINT1-210ENST00000530742 LRRC59Q96AG4 307 aaKnown RBP15.32■□□□□ 0.04
CLINT1-210ENST00000530742 AXIN2Q9Y2T1 843 aa15.32■□□□□ 0.04
CLINT1-210ENST00000530742 HSPA4P34932 840 aa15.32■□□□□ 0.04
CLINT1-210ENST00000530742 PDIA6Q15084 440 aa15.32■□□□□ 0.04
CLINT1-210ENST00000530742 SSFA2P28290 1259 aa15.31■□□□□ 0.04
CLINT1-210ENST00000530742 C1orf141Q5JVX7 400 aa15.31■□□□□ 0.04
CLINT1-210ENST00000530742 PI4KAP2A4QPH2 592 aa15.3■□□□□ 0.04
CLINT1-210ENST00000530742 NBPF7P0C2Y1 421 aaPredicted RBP15.3■□□□□ 0.04
CLINT1-210ENST00000530742 PI4KAP1Q8N8J0 262 aa15.3■□□□□ 0.04
CLINT1-210ENST00000530742 MEGF6O75095 1541 aa15.3■□□□□ 0.04
CLINT1-210ENST00000530742 MCCP23508 829 aa15.3■□□□□ 0.04
CLINT1-210ENST00000530742 DDX21Q9NR30 783 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLINT1-210ENST00000530742 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
CLINT1-210ENST00000530742 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
CLINT1-210ENST00000530742 TJP1Q07157 1748 aa15.29■□□□□ 0.04
CLINT1-210ENST00000530742 RAD50Q92878 1312 aa15.29■□□□□ 0.04
CLINT1-210ENST00000530742 SGSM2O43147 1006 aa15.28■□□□□ 0.04
CLINT1-210ENST00000530742 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
CLINT1-210ENST00000530742 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
CLINT1-210ENST00000530742 LINS1Q8NG48 757 aa15.28■□□□□ 0.04
CLINT1-210ENST00000530742 JCADQ9P266 1359 aa15.28■□□□□ 0.04
CLINT1-210ENST00000530742 ZNF445P59923 1031 aa15.28■□□□□ 0.04
CLINT1-210ENST00000530742 MPRIPQ6WCQ1 1025 aa15.28■□□□□ 0.04
CLINT1-210ENST00000530742 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
CLINT1-210ENST00000530742 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
CLINT1-210ENST00000530742 LMBRD1Q9NUN5 540 aa15.27■□□□□ 0.04
CLINT1-210ENST00000530742 NPHP3Q7Z494 1330 aa15.27■□□□□ 0.04
CLINT1-210ENST00000530742 C14orf37Q86TY3 774 aa15.27■□□□□ 0.03
CLINT1-210ENST00000530742 DNAJC5Q9H3Z4 198 aa15.27■□□□□ 0.03
CLINT1-210ENST00000530742 SLC52A2Q9HAB3 445 aa15.27■□□□□ 0.03
CLINT1-210ENST00000530742 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.03
CLINT1-210ENST00000530742 SRGAP3O43295 1099 aa15.27■□□□□ 0.03
CLINT1-210ENST00000530742 NECTIN2Q92692 538 aa15.27■□□□□ 0.03
CLINT1-210ENST00000530742 LSG1Q9H089 658 aaKnown RBP15.27■□□□□ 0.03
CLINT1-210ENST00000530742 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.03
CLINT1-210ENST00000530742 HSP90AA1P07900 732 aaKnown RBP15.26■□□□□ 0.03
CLINT1-210ENST00000530742 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
CLINT1-210ENST00000530742 PHKG2P15735 406 aa15.26■□□□□ 0.03
CLINT1-210ENST00000530742 KAZALD1Q96I82 304 aa15.26■□□□□ 0.03
CLINT1-210ENST00000530742 TMX3Q96JJ7 454 aa15.26■□□□□ 0.03
CLINT1-210ENST00000530742 APBB1O00213 710 aa15.25■□□□□ 0.03
CLINT1-210ENST00000530742 GLRX3O76003 335 aaKnown RBP15.25■□□□□ 0.03
CLINT1-210ENST00000530742 BRD1O95696 1058 aa15.25■□□□□ 0.03
CLINT1-210ENST00000530742 PROSER2Q86WR7 435 aaPredicted RBP15.25■□□□□ 0.03
CLINT1-210ENST00000530742 TTC14Q96N46 770 aa15.25■□□□□ 0.03
CLINT1-210ENST00000530742 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
CLINT1-210ENST00000530742 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
CLINT1-210ENST00000530742 RFX7Q2KHR2 1363 aa15.25■□□□□ 0.03
CLINT1-210ENST00000530742 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
CLINT1-210ENST00000530742 EIF2S2P20042 333 aaKnown RBP15.24■□□□□ 0.03
CLINT1-210ENST00000530742 TICAM2Q86XR7 235 aa15.24■□□□□ 0.03
CLINT1-210ENST00000530742 SPEF2Q9C093 1822 aa15.24■□□□□ 0.03
CLINT1-210ENST00000530742 PROSER3Q2NL68 480 aa15.24■□□□□ 0.03
CLINT1-210ENST00000530742 ZNF790Q6PG37 636 aa15.24■□□□□ 0.03
CLINT1-210ENST00000530742 IL25Q9H293 177 aa15.24■□□□□ 0.03
CLINT1-210ENST00000530742 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms