RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
CTSF-208ENST00000530565 LMOD3Q0VAK6 560 aa11.27□□□□□ -0.61
CTSF-208ENST00000530565 TEFQ10587 303 aa11.27□□□□□ -0.61
CTSF-208ENST00000530565 NEUROD2Q15784 382 aa11.27□□□□□ -0.61
CTSF-208ENST00000530565 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
CTSF-208ENST00000530565 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
CTSF-208ENST00000530565 ATG3Q9NT62 314 aa11.26□□□□□ -0.61
CTSF-208ENST00000530565 ASAP1Q9ULH1 1129 aa11.26□□□□□ -0.61
CTSF-208ENST00000530565 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
CTSF-208ENST00000530565 APLP1P51693 650 aa11.25□□□□□ -0.61
CTSF-208ENST00000530565 THUMPD2Q9BTF0 503 aaKnown RBP11.25□□□□□ -0.61
CTSF-208ENST00000530565 TRIM35Q9UPQ4 493 aa11.25□□□□□ -0.61
CTSF-208ENST00000530565 PCNTO95613 3336 aa11.24□□□□□ -0.61
CTSF-208ENST00000530565 GNPATO15228 680 aa11.24□□□□□ -0.61
CTSF-208ENST00000530565 TOMM70O94826 608 aa11.24□□□□□ -0.61
CTSF-208ENST00000530565 MMP10P09238 476 aa11.24□□□□□ -0.61
CTSF-208ENST00000530565 SLC4A9Q96Q91 983 aa11.24□□□□□ -0.61
CTSF-208ENST00000530565 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
CTSF-208ENST00000530565 TGFB2P61812 414 aa11.23□□□□□ -0.61
CTSF-208ENST00000530565 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
CTSF-208ENST00000530565 NMRK2Q9NPI5 230 aa11.23□□□□□ -0.61
CTSF-208ENST00000530565 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
CTSF-208ENST00000530565 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
CTSF-208ENST00000530565 SLC39A6Q13433 755 aa11.22□□□□□ -0.61
CTSF-208ENST00000530565 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
CTSF-208ENST00000530565 CCDC27Q2M243 656 aa11.22□□□□□ -0.61
CTSF-208ENST00000530565 MYH14Q7Z406 1995 aaKnown RBP11.22□□□□□ -0.61
CTSF-208ENST00000530565 UBR2Q8IWV8 1755 aa11.22□□□□□ -0.61
CTSF-208ENST00000530565 KDM3BQ7LBC6 1761 aa11.21□□□□□ -0.61
CTSF-208ENST00000530565 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
CTSF-208ENST00000530565 DPEP1P16444 411 aa11.21□□□□□ -0.61
CTSF-208ENST00000530565 KCNA3P22001 575 aa11.21□□□□□ -0.61
CTSF-208ENST00000530565 ZNF790Q6PG37 636 aa11.21□□□□□ -0.61
CTSF-208ENST00000530565 NGEFQ8N5V2 710 aa11.21□□□□□ -0.61
CTSF-208ENST00000530565 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.61
CTSF-208ENST00000530565 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
CTSF-208ENST00000530565 PTCD1O75127 700 aaKnown RBP11.2□□□□□ -0.62
CTSF-208ENST00000530565 GYS1P13807 737 aa11.2□□□□□ -0.62
CTSF-208ENST00000530565 WWC1Q8IX03 1113 aa11.2□□□□□ -0.62
CTSF-208ENST00000530565 TTC5Q8N0Z6 440 aa11.2□□□□□ -0.62
CTSF-208ENST00000530565 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
CTSF-208ENST00000530565 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
CTSF-208ENST00000530565 SBF1O95248 1867 aa11.19□□□□□ -0.62
CTSF-208ENST00000530565 TJP1Q07157 1748 aa11.19□□□□□ -0.62
CTSF-208ENST00000530565 KCNQ3O43525 872 aa11.19□□□□□ -0.62
CTSF-208ENST00000530565 HTRA3P83110 453 aa11.19□□□□□ -0.62
CTSF-208ENST00000530565 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
CTSF-208ENST00000530565 TRAPPC3LQ5T215 181 aa11.19□□□□□ -0.62
CTSF-208ENST00000530565 ARHGAP27Q6ZUM4 889 aa11.19□□□□□ -0.62
CTSF-208ENST00000530565 NLGN1Q8N2Q7 840 aa11.19□□□□□ -0.62
CTSF-208ENST00000530565 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
CTSF-208ENST00000530565 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
CTSF-208ENST00000530565 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
CTSF-208ENST00000530565 RTCBQ9Y3I0 505 aaKnown RBP11.19□□□□□ -0.62
CTSF-208ENST00000530565 TNRC6CQ9HCJ0 1690 aaKnown RBP11.19□□□□□ -0.62
CTSF-208ENST00000530565 CNTNAP4Q9C0A0 1308 aa11.18□□□□□ -0.62
CTSF-208ENST00000530565 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
CTSF-208ENST00000530565 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
CTSF-208ENST00000530565 ZNF496Q96IT1 587 aaPredicted RBP11.18□□□□□ -0.62
CTSF-208ENST00000530565 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
CTSF-208ENST00000530565 FMNL2Q96PY5 1086 aa11.18□□□□□ -0.62
CTSF-208ENST00000530565 CCDC87Q9NVE4 849 aa11.18□□□□□ -0.62
CTSF-208ENST00000530565 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
CTSF-208ENST00000530565 LAS1LQ9Y4W2 734 aaKnown RBP11.18□□□□□ -0.62
CTSF-208ENST00000530565 HEG1Q9ULI3 1381 aa11.17□□□□□ -0.62
CTSF-208ENST00000530565 CHL1O00533 1208 aa11.17□□□□□ -0.62
CTSF-208ENST00000530565 RPS6KA4O75676 772 aa11.17□□□□□ -0.62
CTSF-208ENST00000530565 ADRA2BP18089 450 aa11.17□□□□□ -0.62
CTSF-208ENST00000530565 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
CTSF-208ENST00000530565 C9orf131Q5VYM1 1079 aa11.17□□□□□ -0.62
CTSF-208ENST00000530565 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
CTSF-208ENST00000530565 KLRG1Q96E93 195 aa11.17□□□□□ -0.62
CTSF-208ENST00000530565 IFT57Q9NWB7 429 aa11.17□□□□□ -0.62
CTSF-208ENST00000530565 ZNF853P0CG23 659 aa11.16□□□□□ -0.62
CTSF-208ENST00000530565 EIF4A1P60842 406 aaKnown RBP11.16□□□□□ -0.62
CTSF-208ENST00000530565 GNAI1P63096 354 aa11.16□□□□□ -0.62
CTSF-208ENST00000530565 WDR63Q8IWG1 891 aa11.16□□□□□ -0.62
CTSF-208ENST00000530565 IL16Q14005 1332 aa11.15□□□□□ -0.62
CTSF-208ENST00000530565 ZNF521Q96K83 1311 aa11.15□□□□□ -0.62
CTSF-208ENST00000530565 DDR1Q08345 913 aa11.15□□□□□ -0.62
CTSF-208ENST00000530565 FSTL1Q12841 308 aa11.15□□□□□ -0.62
CTSF-208ENST00000530565 DNAJC10Q8IXB1 793 aa11.15□□□□□ -0.62
CTSF-208ENST00000530565 MBIPQ9NS73 344 aa11.15□□□□□ -0.62
CTSF-208ENST00000530565 PARP3Q9Y6F1 533 aa11.15□□□□□ -0.62
CTSF-208ENST00000530565 DLEC1Q9Y238 1755 aa11.14□□□□□ -0.63
CTSF-208ENST00000530565 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
CTSF-208ENST00000530565 RFC4P35249 363 aa11.14□□□□□ -0.63
CTSF-208ENST00000530565 TEX13AQ9BXU3 409 aaPredicted RBP11.14□□□□□ -0.63
CTSF-208ENST00000530565 SRP68Q9UHB9 627 aaKnown RBP11.14□□□□□ -0.63
CTSF-208ENST00000530565 NRXN2Q9P2S2 1712 aa11.14□□□□□ -0.63
CTSF-208ENST00000530565 AFDNP55196 1824 aaKnown RBP11.14□□□□□ -0.63
CTSF-208ENST00000530565 LAMB4A4D0S4 1761 aa11.13□□□□□ -0.63
CTSF-208ENST00000530565 USP42Q9H9J4 1324 aaKnown RBP11.13□□□□□ -0.63
CTSF-208ENST00000530565 PRAMEF22A3QJZ6 481 aa11.13□□□□□ -0.63
CTSF-208ENST00000530565 CYP19A1P11511 503 aaPredicted RBP11.13□□□□□ -0.63
CTSF-208ENST00000530565 HNRNPUQ00839 825 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTSF-208ENST00000530565 FKBP8Q14318 412 aa11.13□□□□□ -0.63
CTSF-208ENST00000530565 PIM2Q9P1W9 311 aa11.13□□□□□ -0.63
CTSF-208ENST00000530565 TIAM2Q8IVF5 1701 aa11.12□□□□□ -0.63
CTSF-208ENST00000530565 STARD3NLO95772 234 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms