RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PDE1AP54750 535 aa14.16□□□□□ -0.14
USP35-207ENST00000530546 IL1RAPL2Q9NP60 686 aa14.16□□□□□ -0.14
USP35-207ENST00000530546 MED1Q15648 1581 aaPredicted RBP14.16□□□□□ -0.14
USP35-207ENST00000530546 GIGYF1O75420 1035 aaPredicted RBP14.15□□□□□ -0.14
USP35-207ENST00000530546 AIMP1Q12904 312 aaKnown RBP14.15□□□□□ -0.14
USP35-207ENST00000530546 KIF2CQ99661 725 aa14.15□□□□□ -0.14
USP35-207ENST00000530546 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
USP35-207ENST00000530546 HSP90AB1P08238 724 aaKnown RBP14.15□□□□□ -0.14
USP35-207ENST00000530546 PDE4CQ08493 712 aa14.15□□□□□ -0.14
USP35-207ENST00000530546 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
USP35-207ENST00000530546 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
USP35-207ENST00000530546 KIF1AQ12756 1690 aa14.15□□□□□ -0.15
USP35-207ENST00000530546 PHRF1Q9P1Y6 1649 aaKnown RBP14.14□□□□□ -0.15
USP35-207ENST00000530546 SURF6O75683 361 aaKnown RBP14.14□□□□□ -0.15
USP35-207ENST00000530546 BEND3Q5T5X7 828 aa14.14□□□□□ -0.15
USP35-207ENST00000530546 KIAA1211Q6ZU35 1233 aa14.14□□□□□ -0.15
USP35-207ENST00000530546 STRCP1A6NGW2 1772 aa14.14□□□□□ -0.15
USP35-207ENST00000530546 RGPD5Q99666 1765 aa14.14□□□□□ -0.15
USP35-207ENST00000530546 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
USP35-207ENST00000530546 CASC1Q6TDU7 716 aa14.13□□□□□ -0.15
USP35-207ENST00000530546 NFATC2IPQ8NCF5 419 aa14.13□□□□□ -0.15
USP35-207ENST00000530546 MAP3K2Q9Y2U5 619 aa14.13□□□□□ -0.15
USP35-207ENST00000530546 SRGAP3O43295 1099 aa14.13□□□□□ -0.15
USP35-207ENST00000530546 NCAPD2Q15021 1401 aa14.13□□□□□ -0.15
USP35-207ENST00000530546 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
USP35-207ENST00000530546 LMO7Q8WWI1 1683 aa14.12□□□□□ -0.15
USP35-207ENST00000530546 SPG7Q9UQ90 795 aa14.12□□□□□ -0.15
USP35-207ENST00000530546 ADCY9O60503 1353 aa14.12□□□□□ -0.15
USP35-207ENST00000530546 TRIM6-TRIM34B2RNG4 842 aa14.12□□□□□ -0.15
USP35-207ENST00000530546 PHKG2P15735 406 aa14.12□□□□□ -0.15
USP35-207ENST00000530546 MX1P20591 662 aa14.12□□□□□ -0.15
USP35-207ENST00000530546 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
USP35-207ENST00000530546 RILPL2Q969X0 211 aa14.12□□□□□ -0.15
USP35-207ENST00000530546 IBTKQ9P2D0 1353 aaPredicted RBP14.12□□□□□ -0.15
USP35-207ENST00000530546 MYL6BP14649 208 aa14.11□□□□□ -0.15
USP35-207ENST00000530546 PTMSP20962 102 aa14.11□□□□□ -0.15
USP35-207ENST00000530546 CWF19L2Q2TBE0 894 aaKnown RBP14.11□□□□□ -0.15
USP35-207ENST00000530546 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.11□□□□□ -0.15
USP35-207ENST00000530546 SPATA31A3Q5VYP0 1347 aa14.11□□□□□ -0.15
USP35-207ENST00000530546 OFD1O75665 1012 aa14.11□□□□□ -0.15
USP35-207ENST00000530546 RBM10P98175 930 aaKnown RBP14.11□□□□□ -0.15
USP35-207ENST00000530546 BRINP3Q76B58 766 aa14.11□□□□□ -0.15
USP35-207ENST00000530546 C9orf78Q9NZ63 289 aaPredicted RBP14.11□□□□□ -0.15
USP35-207ENST00000530546 TNS3Q68CZ2 1445 aa14.11□□□□□ -0.15
USP35-207ENST00000530546 PXDNLA1KZ92 1463 aa14.11□□□□□ -0.15
USP35-207ENST00000530546 PDIA4P13667 645 aaKnown RBP14.1□□□□□ -0.15
USP35-207ENST00000530546 ZNF790Q6PG37 636 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 SSH3Q8TE77 659 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 SNX21Q969T3 373 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 ALS2Q96Q42 1657 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 KDM3BQ7LBC6 1761 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 PIP4K2AP48426 406 aaPredicted RBP14.1□□□□□ -0.15
USP35-207ENST00000530546 CCDC173Q0VFZ6 552 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 USP26Q9BXU7 913 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 MEGF6O75095 1541 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 DCCP43146 1447 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 IFNL2Q8IZJ0 200 aa14.1□□□□□ -0.15
USP35-207ENST00000530546 OS9Q13438 667 aaPredicted RBP14.09□□□□□ -0.15
USP35-207ENST00000530546 SKOR2Q2VWA4 1001 aaPredicted RBP14.09□□□□□ -0.15
USP35-207ENST00000530546 KSR2Q6VAB6 950 aa14.09□□□□□ -0.15
USP35-207ENST00000530546 MTERF4Q7Z6M4 381 aaKnown RBP14.09□□□□□ -0.15
USP35-207ENST00000530546 OSBPL3Q9H4L5 887 aa14.09□□□□□ -0.15
USP35-207ENST00000530546 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
USP35-207ENST00000530546 MAP4K4O95819 1239 aaPredicted RBP14.09□□□□□ -0.15
USP35-207ENST00000530546 ZSCAN30Q86W11 494 aa14.09□□□□□ -0.15
USP35-207ENST00000530546 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
USP35-207ENST00000530546 CYP27B1O15528 508 aa14.08□□□□□ -0.16
USP35-207ENST00000530546 CACNA1FO60840 1977 aa14.08□□□□□ -0.16
USP35-207ENST00000530546 KDM6AO15550 1401 aaPredicted RBP14.08□□□□□ -0.16
USP35-207ENST00000530546 PPP1R9BQ96SB3 815 aa14.08□□□□□ -0.16
USP35-207ENST00000530546 HYPKQ9NX55 129 aa14.08□□□□□ -0.16
USP35-207ENST00000530546 SALL3Q9BXA9 1300 aa14.08□□□□□ -0.16
USP35-207ENST00000530546 ERC2O15083 957 aa14.07□□□□□ -0.16
USP35-207ENST00000530546 SMAP1Q8IYB5 467 aaPredicted RBP14.07□□□□□ -0.16
USP35-207ENST00000530546 RHPN1Q8TCX5 695 aa14.07□□□□□ -0.16
USP35-207ENST00000530546 ZNF496Q96IT1 587 aaPredicted RBP14.07□□□□□ -0.16
USP35-207ENST00000530546 K7ELQ4 463 aaPredicted RBP14.07□□□□□ -0.16
USP35-207ENST00000530546 POLA2Q14181 598 aa14.07□□□□□ -0.16
USP35-207ENST00000530546 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
USP35-207ENST00000530546 UNC5CLQ8IV45 518 aa14.07□□□□□ -0.16
USP35-207ENST00000530546 TTC5Q8N0Z6 440 aa14.07□□□□□ -0.16
USP35-207ENST00000530546 DDX21Q9NR30 783 aaKnown RBP eCLIP14.07□□□□□ -0.16
USP35-207ENST00000530546 NCOA3Q9Y6Q9 1424 aa14.07□□□□□ -0.16
USP35-207ENST00000530546 TOM1L2Q6ZVM7 507 aa14.07□□□□□ -0.16
USP35-207ENST00000530546 HEG1Q9ULI3 1381 aa14.06□□□□□ -0.16
USP35-207ENST00000530546 OVOS2A0A0G2JMS6 1433 aa14.06□□□□□ -0.16
USP35-207ENST00000530546 REC8O95072 547 aa14.06□□□□□ -0.16
USP35-207ENST00000530546 SLAIN2Q9P270 581 aa14.06□□□□□ -0.16
USP35-207ENST00000530546 DDX58O95786 925 aaKnown RBP14.06□□□□□ -0.16
USP35-207ENST00000530546 PDIA6Q15084 440 aa14.06□□□□□ -0.16
USP35-207ENST00000530546 PA2G4Q9UQ80 394 aaKnown RBP14.06□□□□□ -0.16
USP35-207ENST00000530546 USP16Q9Y5T5 823 aa14.06□□□□□ -0.16
USP35-207ENST00000530546 RAB11FIP3O75154 756 aa14.05□□□□□ -0.16
USP35-207ENST00000530546 CABP4P57796 275 aa14.05□□□□□ -0.16
USP35-207ENST00000530546 XAGE3Q8WTP9 111 aa14.05□□□□□ -0.16
USP35-207ENST00000530546 RABEP1Q15276 862 aa14.05□□□□□ -0.16
USP35-207ENST00000530546 STRN4Q9NRL3 753 aa14.05□□□□□ -0.16
USP35-207ENST00000530546 CAMTA1Q9Y6Y1 1673 aa14.05□□□□□ -0.16
USP35-207ENST00000530546 ALDH1L1O75891 902 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms