RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 UTRNP46939 3433 aa24.95■■□□□ 1.59
PCNX3-203ENST00000530174 MAPK8IP3Q9UPT6 1336 aa24.95■■□□□ 1.58
PCNX3-203ENST00000530174 CANXP27824 592 aaKnown RBP24.94■■□□□ 1.58
PCNX3-203ENST00000530174 FKBP8Q14318 412 aa24.94■■□□□ 1.58
PCNX3-203ENST00000530174 NFE2L2Q16236 605 aa24.94■■□□□ 1.58
PCNX3-203ENST00000530174 TEX13AQ9BXU3 409 aaPredicted RBP24.94■■□□□ 1.58
PCNX3-203ENST00000530174 YBX3P16989 372 aaKnown RBP eCLIP24.93■■□□□ 1.58
PCNX3-203ENST00000530174 ZPR1O75312 459 aa24.92■■□□□ 1.58
PCNX3-203ENST00000530174 USPL1Q5W0Q7 1092 aa24.92■■□□□ 1.58
PCNX3-203ENST00000530174 PRKRIP1Q9H875 184 aaPredicted RBP24.92■■□□□ 1.58
PCNX3-203ENST00000530174 PARP3Q9Y6F1 533 aa24.92■■□□□ 1.58
PCNX3-203ENST00000530174 KIF13BQ9NQT8 1826 aa24.91■■□□□ 1.58
PCNX3-203ENST00000530174 C10orf71Q711Q0 1435 aa24.91■■□□□ 1.58
PCNX3-203ENST00000530174 CHD4Q14839 1912 aa24.9■■□□□ 1.58
PCNX3-203ENST00000530174 TAF7Q15545 349 aaPredicted RBP24.9■■□□□ 1.58
PCNX3-203ENST00000530174 NARFQ9UHQ1 456 aa24.9■■□□□ 1.58
PCNX3-203ENST00000530174 GOLGB1Q14789 3259 aaKnown RBP24.9■■□□□ 1.58
PCNX3-203ENST00000530174 EIF5P55010 431 aaKnown RBP24.89■■□□□ 1.58
PCNX3-203ENST00000530174 DDR1Q08345 913 aa24.88■■□□□ 1.57
PCNX3-203ENST00000530174 THUMPD2Q9BTF0 503 aaKnown RBP24.88■■□□□ 1.57
PCNX3-203ENST00000530174 GRIN3BO60391 1043 aa24.87■■□□□ 1.57
PCNX3-203ENST00000530174 A1BGP04217 495 aa24.87■■□□□ 1.57
PCNX3-203ENST00000530174 MIS18AQ9NYP9 233 aa24.87■■□□□ 1.57
PCNX3-203ENST00000530174 PXDNLA1KZ92 1463 aa24.87■■□□□ 1.57
PCNX3-203ENST00000530174 KIAA1551Q9HCM1 1747 aa24.86■■□□□ 1.57
PCNX3-203ENST00000530174 PRAMEF22A3QJZ6 481 aa24.86■■□□□ 1.57
PCNX3-203ENST00000530174 SNRPA1P09661 255 aaKnown RBP24.86■■□□□ 1.57
PCNX3-203ENST00000530174 WWC3Q9ULE0 1092 aa24.86■■□□□ 1.57
PCNX3-203ENST00000530174 USP16Q9Y5T5 823 aa24.86■■□□□ 1.57
PCNX3-203ENST00000530174 A0A087WZG4 1122 aa24.85■■□□□ 1.57
PCNX3-203ENST00000530174 TM4SF1P30408 202 aa24.85■■□□□ 1.57
PCNX3-203ENST00000530174 BCL2L12Q9HB09 334 aa24.85■■□□□ 1.57
PCNX3-203ENST00000530174 ZNF330Q9Y3S2 320 aaPredicted RBP24.85■■□□□ 1.57
PCNX3-203ENST00000530174 KDM3BQ7LBC6 1761 aa24.85■■□□□ 1.57
PCNX3-203ENST00000530174 POLRMTO00411 1230 aaKnown RBP24.84■■□□□ 1.57
PCNX3-203ENST00000530174 IL6STP40189 918 aaPredicted RBP24.84■■□□□ 1.57
PCNX3-203ENST00000530174 WDR43Q15061 677 aaKnown RBP eCLIP24.84■■□□□ 1.57
PCNX3-203ENST00000530174 PNISRQ8TF01 805 aaKnown RBP24.84■■□□□ 1.57
PCNX3-203ENST00000530174 N4BP2Q86UW6 1770 aaPredicted RBP24.83■■□□□ 1.57
PCNX3-203ENST00000530174 RIPK4P57078 832 aa24.83■■□□□ 1.57
PCNX3-203ENST00000530174 TGFB2P61812 414 aa24.83■■□□□ 1.57
PCNX3-203ENST00000530174 NFIXQ14938 502 aa24.83■■□□□ 1.57
PCNX3-203ENST00000530174 CCDC146Q8IYE0 955 aa24.83■■□□□ 1.57
PCNX3-203ENST00000530174 TMPOP42166 694 aaKnown RBP24.82■■□□□ 1.56
PCNX3-203ENST00000530174 SCN7AQ01118 1682 aa24.81■■□□□ 1.56
PCNX3-203ENST00000530174 A0A0G2JLW4 131 aa24.81■■□□□ 1.56
PCNX3-203ENST00000530174 PIP4K2AP48426 406 aaPredicted RBP24.81■■□□□ 1.56
PCNX3-203ENST00000530174 ADAMTS8Q9UP79 889 aa24.8■■□□□ 1.56
PCNX3-203ENST00000530174 TBC1D2BQ9UPU7 963 aa24.8■■□□□ 1.56
PCNX3-203ENST00000530174 ZNF316A6NFI3 1004 aaPredicted RBP24.79■■□□□ 1.56
PCNX3-203ENST00000530174 DPEP1P16444 411 aa24.79■■□□□ 1.56
PCNX3-203ENST00000530174 NPM2Q86SE8 214 aaKnown RBP24.79■■□□□ 1.56
PCNX3-203ENST00000530174 RRP7AQ9Y3A4 280 aaKnown RBP24.79■■□□□ 1.56
PCNX3-203ENST00000530174 LAMB4A4D0S4 1761 aa24.78■■□□□ 1.56
PCNX3-203ENST00000530174 AFDNP55196 1824 aaKnown RBP24.78■■□□□ 1.56
PCNX3-203ENST00000530174 RUNDC1Q96C34 613 aa24.78■■□□□ 1.56
PCNX3-203ENST00000530174 EIF4A1P60842 406 aaKnown RBP24.77■■□□□ 1.56
PCNX3-203ENST00000530174 LMOD3Q0VAK6 560 aa24.77■■□□□ 1.56
PCNX3-203ENST00000530174 NRXN2Q9P2S2 1712 aa24.77■■□□□ 1.56
PCNX3-203ENST00000530174 BICDL1Q6ZP65 573 aa24.76■■□□□ 1.55
PCNX3-203ENST00000530174 ZNF784Q8NCA9 323 aaPredicted RBP24.76■■□□□ 1.55
PCNX3-203ENST00000530174 BCORQ6W2J9 1755 aa24.75■■□□□ 1.55
PCNX3-203ENST00000530174 BRCA1P38398 1863 aaKnown RBP24.75■■□□□ 1.55
PCNX3-203ENST00000530174 NBPF26B4DH59 902 aa24.75■■□□□ 1.55
PCNX3-203ENST00000530174 CAMTA2O94983 1202 aa24.75■■□□□ 1.55
PCNX3-203ENST00000530174 SERPINB2P05120 415 aa24.75■■□□□ 1.55
PCNX3-203ENST00000530174 NEUROD2Q15784 382 aa24.75■■□□□ 1.55
PCNX3-203ENST00000530174 TBC1D9BQ66K14 1250 aa24.75■■□□□ 1.55
PCNX3-203ENST00000530174 NBPF10Q6P3W6 841 aaKnown RBP24.75■■□□□ 1.55
PCNX3-203ENST00000530174 DZIP3Q86Y13 1208 aaKnown RBP24.75■■□□□ 1.55
PCNX3-203ENST00000530174 NBPF15Q8N660 670 aa24.75■■□□□ 1.55
PCNX3-203ENST00000530174 GIGYF1O75420 1035 aaPredicted RBP24.74■■□□□ 1.55
PCNX3-203ENST00000530174 KCNA3P22001 575 aa24.74■■□□□ 1.55
PCNX3-203ENST00000530174 TSPYL4Q9UJ04 414 aa24.74■■□□□ 1.55
PCNX3-203ENST00000530174 BCS1LQ9Y276 419 aa24.74■■□□□ 1.55
PCNX3-203ENST00000530174 CHRNA5P30532 468 aa24.71■■□□□ 1.55
PCNX3-203ENST00000530174 PIM2Q9P1W9 311 aa24.7■■□□□ 1.54
PCNX3-203ENST00000530174 TRIM35Q9UPQ4 493 aa24.7■■□□□ 1.54
PCNX3-203ENST00000530174 CARMIL3Q8ND23 1372 aa24.69■■□□□ 1.54
PCNX3-203ENST00000530174 BABAM1Q9NWV8 329 aa24.69■■□□□ 1.54
PCNX3-203ENST00000530174 CCDC184Q52MB2 194 aa24.67■■□□□ 1.54
PCNX3-203ENST00000530174 SETDB2Q96T68 719 aa24.67■■□□□ 1.54
PCNX3-203ENST00000530174 DALRD3Q5D0E6 543 aaKnown RBP24.66■■□□□ 1.54
PCNX3-203ENST00000530174 CLEC4GQ6UXB4 293 aa24.66■■□□□ 1.54
PCNX3-203ENST00000530174 ZNF652Q9Y2D9 606 aa24.66■■□□□ 1.54
PCNX3-203ENST00000530174 ARFGEF1Q9Y6D6 1849 aa24.65■■□□□ 1.54
PCNX3-203ENST00000530174 PRR5LQ6MZQ0 368 aa24.65■■□□□ 1.54
PCNX3-203ENST00000530174 NGEFQ8N5V2 710 aa24.64■■□□□ 1.54
PCNX3-203ENST00000530174 DLEC1Q9Y238 1755 aa24.64■■□□□ 1.53
PCNX3-203ENST00000530174 ANKRD31Q8N7Z5 1873 aa24.64■■□□□ 1.53
PCNX3-203ENST00000530174 CHL1O00533 1208 aa24.63■■□□□ 1.53
PCNX3-203ENST00000530174 APAF1O14727 1248 aa24.63■■□□□ 1.53
PCNX3-203ENST00000530174 RGL2O15211 777 aa24.63■■□□□ 1.53
PCNX3-203ENST00000530174 CCDC24Q8N4L8 307 aa24.63■■□□□ 1.53
PCNX3-203ENST00000530174 ADCY9O60503 1353 aa24.63■■□□□ 1.53
PCNX3-203ENST00000530174 MYL6BP14649 208 aa24.62■■□□□ 1.53
PCNX3-203ENST00000530174 ARHGAP27Q6ZUM4 889 aa24.62■■□□□ 1.53
PCNX3-203ENST00000530174 C2CD5Q86YS7 1000 aa24.62■■□□□ 1.53
PCNX3-203ENST00000530174 CNBD1Q8NA66 436 aa24.62■■□□□ 1.53
PCNX3-203ENST00000530174 LAS1LQ9Y4W2 734 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms