RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
CAPRIN1-208ENST00000530008 EHHADHQ08426 723 aa10.08□□□□□ -0.8
CAPRIN1-208ENST00000530008 TLR1Q15399 786 aa10.08□□□□□ -0.8
CAPRIN1-208ENST00000530008 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
CAPRIN1-208ENST00000530008 FAM129BQ96TA1 746 aa10.08□□□□□ -0.8
CAPRIN1-208ENST00000530008 ZBTB39O15060 712 aa10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 PRPF40AO75400 957 aaKnown RBP10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 MAPK8P45983 427 aa10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 FGD1P98174 961 aa10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 PDE3BQ13370 1112 aa10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 CNKSR1Q969H4 720 aa10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 HRH3Q9Y5N1 445 aa10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
CAPRIN1-208ENST00000530008 GPR182O15218 404 aa10.06□□□□□ -0.8
CAPRIN1-208ENST00000530008 BRD2P25440 801 aaKnown RBP10.06□□□□□ -0.8
CAPRIN1-208ENST00000530008 FAM26DQ5JW98 314 aa10.06□□□□□ -0.8
CAPRIN1-208ENST00000530008 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
CAPRIN1-208ENST00000530008 NGLY1Q96IV0 654 aa10.06□□□□□ -0.8
CAPRIN1-208ENST00000530008 ESYT1Q9BSJ8 1104 aa10.06□□□□□ -0.8
CAPRIN1-208ENST00000530008 SERTM1A2A2V5 107 aa10.05□□□□□ -0.8
CAPRIN1-208ENST00000530008 EML1O00423 815 aa10.05□□□□□ -0.8
CAPRIN1-208ENST00000530008 SCAMP3O14828 347 aaKnown RBP10.05□□□□□ -0.8
CAPRIN1-208ENST00000530008 XPCQ01831 940 aaPredicted RBP10.05□□□□□ -0.8
CAPRIN1-208ENST00000530008 TEAD4Q15561 434 aa10.05□□□□□ -0.8
CAPRIN1-208ENST00000530008 ATCAYQ86WG3 371 aa10.05□□□□□ -0.8
CAPRIN1-208ENST00000530008 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
CAPRIN1-208ENST00000530008 PARP2Q9UGN5 583 aa10.05□□□□□ -0.8
CAPRIN1-208ENST00000530008 WNT7AO00755 349 aa10.04□□□□□ -0.8
CAPRIN1-208ENST00000530008 ADH1AP07327 375 aa10.04□□□□□ -0.8
CAPRIN1-208ENST00000530008 HIRAP54198 1017 aaPredicted RBP10.04□□□□□ -0.8
CAPRIN1-208ENST00000530008 SH3PXD2AQ5TCZ1 1133 aa10.04□□□□□ -0.8
CAPRIN1-208ENST00000530008 SREK1Q8WXA9 508 aaKnown RBP10.04□□□□□ -0.8
CAPRIN1-208ENST00000530008 ALKBH8Q96BT7 664 aaKnown RBP10.04□□□□□ -0.8
CAPRIN1-208ENST00000530008 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
CAPRIN1-208ENST00000530008 HCSTQ9UBK5 93 aa10.04□□□□□ -0.8
CAPRIN1-208ENST00000530008 ERCC5P28715 1186 aaPredicted RBP10.03□□□□□ -0.8
CAPRIN1-208ENST00000530008 LDLRAD1Q5T700 205 aa10.03□□□□□ -0.8
CAPRIN1-208ENST00000530008 ZDHHC1Q8WTX9 485 aa10.03□□□□□ -0.8
CAPRIN1-208ENST00000530008 MRGPRX2Q96LB1 330 aa10.03□□□□□ -0.8
CAPRIN1-208ENST00000530008 FAM161BQ96MY7 647 aa10.03□□□□□ -0.8
CAPRIN1-208ENST00000530008 POLIQ9UNA4 740 aa10.03□□□□□ -0.8
CAPRIN1-208ENST00000530008 NOS2P35228 1153 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 HDLBPQ00341 1268 aaKnown RBP10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 ATP2B2Q01814 1243 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 CLN3Q13286 438 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 NAALADL2Q58DX5 795 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 TMC4Q7Z404 712 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 ALDH16A1Q8IZ83 802 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 GJD3Q8N144 294 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 KDF1Q8NAX2 398 aaPredicted RBP10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 EMID1Q96A84 441 aaPredicted RBP10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 FHDC1Q9C0D6 1143 aaPredicted RBP10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 NIF3L1Q9GZT8 377 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 MRS2Q9HD23 443 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 RNF19AQ9NV58 838 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 WWC3Q9ULE0 1092 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 ZNF232Q9UNY5 417 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 HCN4Q9Y3Q4 1203 aa10.02□□□□□ -0.81
CAPRIN1-208ENST00000530008 MZF1P28698 734 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 DAB2P98082 770 aa10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 CENPCQ03188 943 aa10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 RTN1Q16799 776 aa10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 C11orf91Q3C1V1 193 aa10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 ETFBKMTQ8IXQ9 262 aa10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 ZNF295-AS1Q8N0V1 137 aa10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 CABP1Q9NZU7 370 aa10.01□□□□□ -0.81
CAPRIN1-208ENST00000530008 ITGAEP38570 1179 aa10□□□□□ -0.81
CAPRIN1-208ENST00000530008 DGKZQ13574 1117 aa10□□□□□ -0.81
CAPRIN1-208ENST00000530008 ENOX2Q16206 610 aaKnown RBP10□□□□□ -0.81
CAPRIN1-208ENST00000530008 L3MBTL2Q969R5 705 aa10□□□□□ -0.81
CAPRIN1-208ENST00000530008 SETDB2Q96T68 719 aa10□□□□□ -0.81
CAPRIN1-208ENST00000530008 SORBS3O60504 671 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 PDGFAP04085 211 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 USP5P45974 858 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 DNM1Q05193 864 aaKnown RBP9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 CBLBQ13191 982 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 PSMD2Q13200 908 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 NNTQ13423 1086 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 C9orf131Q5VYM1 1079 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 TMEM87AQ8NBN3 555 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 EDEM1Q92611 657 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 IFT43Q96FT9 208 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 KLK14Q9P0G3 267 aa9.99□□□□□ -0.81
CAPRIN1-208ENST00000530008 PNMA6FA0A0J9YX94 578 aa9.98□□□□□ -0.81
CAPRIN1-208ENST00000530008 PTGIRP43119 386 aa9.98□□□□□ -0.81
CAPRIN1-208ENST00000530008 ZAP70P43403 619 aa9.98□□□□□ -0.81
CAPRIN1-208ENST00000530008 PHACTR1Q9C0D0 580 aa9.98□□□□□ -0.81
CAPRIN1-208ENST00000530008 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
CAPRIN1-208ENST00000530008 MEN1O00255 615 aa9.97□□□□□ -0.81
CAPRIN1-208ENST00000530008 ALG1LQ6GMV1 187 aa9.97□□□□□ -0.81
CAPRIN1-208ENST00000530008 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
CAPRIN1-208ENST00000530008 Q6ZVU0 165 aa9.97□□□□□ -0.81
CAPRIN1-208ENST00000530008 PPARGC1BQ86YN6 1023 aaKnown RBP9.97□□□□□ -0.81
CAPRIN1-208ENST00000530008 NLRP3Q96P20 1036 aa9.97□□□□□ -0.81
CAPRIN1-208ENST00000530008 VTI1BQ9UEU0 232 aa9.97□□□□□ -0.81
CAPRIN1-208ENST00000530008 ALDH1A1P00352 501 aa9.96□□□□□ -0.82
CAPRIN1-208ENST00000530008 SLC19A1P41440 591 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms