RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
PACS1-210ENST00000529795 GYS1P13807 737 aa16.78■□□□□ 0.28
PACS1-210ENST00000529795 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
PACS1-210ENST00000529795 SOS1Q07889 1333 aaPredicted RBP16.77■□□□□ 0.28
PACS1-210ENST00000529795 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
PACS1-210ENST00000529795 C4AP0C0L4 1744 aa16.77■□□□□ 0.28
PACS1-210ENST00000529795 ZNF316A6NFI3 1004 aaPredicted RBP16.77■□□□□ 0.28
PACS1-210ENST00000529795 YY1P25490 414 aa16.77■□□□□ 0.28
PACS1-210ENST00000529795 SNRPA1P09661 255 aaKnown RBP16.76■□□□□ 0.27
PACS1-210ENST00000529795 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
PACS1-210ENST00000529795 COL15A1P39059 1388 aa16.76■□□□□ 0.27
PACS1-210ENST00000529795 IL6STP40189 918 aaPredicted RBP16.75■□□□□ 0.27
PACS1-210ENST00000529795 TGFB2P61812 414 aa16.75■□□□□ 0.27
PACS1-210ENST00000529795 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
PACS1-210ENST00000529795 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
PACS1-210ENST00000529795 RIPK4P57078 832 aa16.74■□□□□ 0.27
PACS1-210ENST00000529795 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
PACS1-210ENST00000529795 NLGN2Q8NFZ4 835 aa16.74■□□□□ 0.27
PACS1-210ENST00000529795 ZBTB1Q9Y2K1 713 aa16.74■□□□□ 0.27
PACS1-210ENST00000529795 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
PACS1-210ENST00000529795 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
PACS1-210ENST00000529795 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
PACS1-210ENST00000529795 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
PACS1-210ENST00000529795 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
PACS1-210ENST00000529795 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
PACS1-210ENST00000529795 SRP68Q9UHB9 627 aaKnown RBP16.71■□□□□ 0.27
PACS1-210ENST00000529795 TM4SF1P30408 202 aa16.7■□□□□ 0.26
PACS1-210ENST00000529795 FKBP8Q14318 412 aa16.7■□□□□ 0.26
PACS1-210ENST00000529795 KCNQ3O43525 872 aa16.69■□□□□ 0.26
PACS1-210ENST00000529795 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
PACS1-210ENST00000529795 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
PACS1-210ENST00000529795 ANP32CO43423 234 aa16.68■□□□□ 0.26
PACS1-210ENST00000529795 A1BGP04217 495 aa16.68■□□□□ 0.26
PACS1-210ENST00000529795 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
PACS1-210ENST00000529795 KDM3BQ7LBC6 1761 aa16.68■□□□□ 0.26
PACS1-210ENST00000529795 RGL2O15211 777 aa16.67■□□□□ 0.26
PACS1-210ENST00000529795 CLEC4GQ6UXB4 293 aa16.67■□□□□ 0.26
PACS1-210ENST00000529795 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
PACS1-210ENST00000529795 C10orf71Q711Q0 1435 aa16.67■□□□□ 0.26
PACS1-210ENST00000529795 POLRMTO00411 1230 aaKnown RBP16.66■□□□□ 0.26
PACS1-210ENST00000529795 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
PACS1-210ENST00000529795 TSPYL4Q9UJ04 414 aa16.66■□□□□ 0.26
PACS1-210ENST00000529795 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
PACS1-210ENST00000529795 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
PACS1-210ENST00000529795 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
PACS1-210ENST00000529795 SERPINB2P05120 415 aa16.65■□□□□ 0.26
PACS1-210ENST00000529795 EIF4A1P60842 406 aaKnown RBP16.65■□□□□ 0.26
PACS1-210ENST00000529795 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
PACS1-210ENST00000529795 NFIXQ14938 502 aa16.65■□□□□ 0.26
PACS1-210ENST00000529795 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
PACS1-210ENST00000529795 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
PACS1-210ENST00000529795 TBC1D2BQ9UPU7 963 aa16.65■□□□□ 0.26
PACS1-210ENST00000529795 YBX3P16989 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
PACS1-210ENST00000529795 DDR1Q08345 913 aa16.64■□□□□ 0.25
PACS1-210ENST00000529795 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
PACS1-210ENST00000529795 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
PACS1-210ENST00000529795 PIM2Q9P1W9 311 aa16.64■□□□□ 0.25
PACS1-210ENST00000529795 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
PACS1-210ENST00000529795 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
PACS1-210ENST00000529795 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
PACS1-210ENST00000529795 NPHP1O15259 732 aa16.63■□□□□ 0.25
PACS1-210ENST00000529795 THUMPD2Q9BTF0 503 aaKnown RBP16.63■□□□□ 0.25
PACS1-210ENST00000529795 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
PACS1-210ENST00000529795 PXDNLA1KZ92 1463 aa16.62■□□□□ 0.25
PACS1-210ENST00000529795 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
PACS1-210ENST00000529795 BCL2L12Q9HB09 334 aa16.62■□□□□ 0.25
PACS1-210ENST00000529795 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
PACS1-210ENST00000529795 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
PACS1-210ENST00000529795 DPEP1P16444 411 aa16.61■□□□□ 0.25
PACS1-210ENST00000529795 BICDL1Q6ZP65 573 aa16.61■□□□□ 0.25
PACS1-210ENST00000529795 CHMP4AQ9BY43 222 aa16.61■□□□□ 0.25
PACS1-210ENST00000529795 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
PACS1-210ENST00000529795 NRXN2Q9P2S2 1712 aa16.61■□□□□ 0.25
PACS1-210ENST00000529795 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
PACS1-210ENST00000529795 PRAMEF22A3QJZ6 481 aa16.6■□□□□ 0.25
PACS1-210ENST00000529795 RRP7AQ9Y3A4 280 aaKnown RBP16.6■□□□□ 0.25
PACS1-210ENST00000529795 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 BRCA1P38398 1863 aaKnown RBP16.59■□□□□ 0.25
PACS1-210ENST00000529795 H0YIN7 160 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 PDE6BP35913 854 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 ST5P78524 1137 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
PACS1-210ENST00000529795 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 KIF6Q6ZMV9 814 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 BRIP1Q9BX63 1249 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 TRIM35Q9UPQ4 493 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
PACS1-210ENST00000529795 NBPF26B4DH59 902 aa16.58■□□□□ 0.24
PACS1-210ENST00000529795 ERVV-1B6SEH8 477 aa16.58■□□□□ 0.24
PACS1-210ENST00000529795 CHL1O00533 1208 aa16.58■□□□□ 0.24
PACS1-210ENST00000529795 NBPF10Q6P3W6 841 aaKnown RBP16.58■□□□□ 0.24
PACS1-210ENST00000529795 NBPF15Q8N660 670 aa16.58■□□□□ 0.24
PACS1-210ENST00000529795 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
PACS1-210ENST00000529795 LAS1LQ9Y4W2 734 aaKnown RBP16.58■□□□□ 0.24
PACS1-210ENST00000529795 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
PACS1-210ENST00000529795 UTRNP46939 3433 aa16.57■□□□□ 0.24
PACS1-210ENST00000529795 APAF1O14727 1248 aa16.57■□□□□ 0.24
PACS1-210ENST00000529795 HOXB7P09629 217 aa16.57■□□□□ 0.24
PACS1-210ENST00000529795 KCNA3P22001 575 aa16.57■□□□□ 0.24
PACS1-210ENST00000529795 TPTE2Q6XPS3 522 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms