RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
TGFBR3-208ENST00000529608 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
TGFBR3-208ENST00000529608 BCS1LQ9Y276 419 aa11.8□□□□□ -0.52
TGFBR3-208ENST00000529608 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
TGFBR3-208ENST00000529608 DPEP1P16444 411 aa11.79□□□□□ -0.52
TGFBR3-208ENST00000529608 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
TGFBR3-208ENST00000529608 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
TGFBR3-208ENST00000529608 NMRK2Q9NPI5 230 aa11.79□□□□□ -0.52
TGFBR3-208ENST00000529608 RTCBQ9Y3I0 505 aaKnown RBP11.79□□□□□ -0.52
TGFBR3-208ENST00000529608 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
TGFBR3-208ENST00000529608 SCN11AQ9UI33 1791 aa11.78□□□□□ -0.52
TGFBR3-208ENST00000529608 TGFB2P61812 414 aa11.78□□□□□ -0.52
TGFBR3-208ENST00000529608 DNAJC5GQ8N7S2 189 aa11.78□□□□□ -0.52
TGFBR3-208ENST00000529608 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
TGFBR3-208ENST00000529608 SBF1O95248 1867 aa11.78□□□□□ -0.52
TGFBR3-208ENST00000529608 ERVV-2B6SEH9 535 aa11.77□□□□□ -0.53
TGFBR3-208ENST00000529608 RPS6KA4O75676 772 aa11.77□□□□□ -0.53
TGFBR3-208ENST00000529608 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.53
TGFBR3-208ENST00000529608 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
TGFBR3-208ENST00000529608 NLGN1Q8N2Q7 840 aa11.77□□□□□ -0.53
TGFBR3-208ENST00000529608 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
TGFBR3-208ENST00000529608 CNTNAP4Q9C0A0 1308 aa11.77□□□□□ -0.53
TGFBR3-208ENST00000529608 ARHGAP27Q6ZUM4 889 aa11.76□□□□□ -0.53
TGFBR3-208ENST00000529608 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
TGFBR3-208ENST00000529608 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
TGFBR3-208ENST00000529608 MAP3K13O43283 966 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 TOMM70O94826 608 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 FCHSD2O94868 740 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 HTRA3P83110 453 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 DDR1Q08345 913 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 DCAF5Q96JK2 942 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 PLEKHG2Q9H7P9 1386 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 KCPQ6ZWJ8 1503 aa11.75□□□□□ -0.53
TGFBR3-208ENST00000529608 PTCD1O75127 700 aaKnown RBP11.74□□□□□ -0.53
TGFBR3-208ENST00000529608 RFC4P35249 363 aa11.74□□□□□ -0.53
TGFBR3-208ENST00000529608 GSE1Q14687 1217 aa11.74□□□□□ -0.53
TGFBR3-208ENST00000529608 ZNF530Q6P9A1 599 aaPredicted RBP11.74□□□□□ -0.53
TGFBR3-208ENST00000529608 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 CHRNA5P30532 468 aa11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 CRKLP46109 303 aaKnown RBP11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 APLP1P51693 650 aa11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 CABP4P57796 275 aa11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 C9orf131Q5VYM1 1079 aa11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 NFATC2IPQ8NCF5 419 aa11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 USP42Q9H9J4 1324 aaKnown RBP11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
TGFBR3-208ENST00000529608 DLEC1Q9Y238 1755 aa11.72□□□□□ -0.53
TGFBR3-208ENST00000529608 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
TGFBR3-208ENST00000529608 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
TGFBR3-208ENST00000529608 PANK3Q9H999 370 aa11.72□□□□□ -0.53
TGFBR3-208ENST00000529608 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.53
TGFBR3-208ENST00000529608 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
TGFBR3-208ENST00000529608 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
TGFBR3-208ENST00000529608 PYGBP11216 843 aa11.71□□□□□ -0.53
TGFBR3-208ENST00000529608 MTHFSP49914 203 aa11.71□□□□□ -0.53
TGFBR3-208ENST00000529608 PRELPP51888 382 aa11.71□□□□□ -0.53
TGFBR3-208ENST00000529608 CCDC88AQ3V6T2 1871 aa11.71□□□□□ -0.53
TGFBR3-208ENST00000529608 POLRMTO00411 1230 aaKnown RBP11.7□□□□□ -0.54
TGFBR3-208ENST00000529608 TM4SF1P30408 202 aa11.7□□□□□ -0.54
TGFBR3-208ENST00000529608 PIM2Q9P1W9 311 aa11.7□□□□□ -0.54
TGFBR3-208ENST00000529608 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 HSPA5P11021 654 aaKnown RBP11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 IL13P35225 146 aa11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 AMOTQ4VCS5 1084 aa11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 SULT6B1Q6IMI4 303 aa11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 DNAJC10Q8IXB1 793 aa11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 RBM46Q8TBY0 533 aaKnown RBP11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 LGR6Q9HBX8 967 aa11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 UBR2Q8IWV8 1755 aa11.69□□□□□ -0.54
TGFBR3-208ENST00000529608 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 RASSF7Q02833 373 aa11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 DALRD3Q5D0E6 543 aaKnown RBP11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 USPL1Q5W0Q7 1092 aa11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 RRAGCQ9HB90 399 aa11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 RNF181Q9P0P0 153 aa11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 CIZ1Q9ULV3 898 aaPredicted RBP11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 MRC1P22897 1456 aa11.68□□□□□ -0.54
TGFBR3-208ENST00000529608 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
TGFBR3-208ENST00000529608 SLC39A6Q13433 755 aa11.67□□□□□ -0.54
TGFBR3-208ENST00000529608 C1orf141Q5JVX7 400 aa11.67□□□□□ -0.54
TGFBR3-208ENST00000529608 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
TGFBR3-208ENST00000529608 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
TGFBR3-208ENST00000529608 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
TGFBR3-208ENST00000529608 CYP19A1P11511 503 aaPredicted RBP11.66□□□□□ -0.54
TGFBR3-208ENST00000529608 NFIXQ14938 502 aa11.66□□□□□ -0.54
TGFBR3-208ENST00000529608 COL13A1Q5TAT6 717 aaPredicted RBP11.66□□□□□ -0.54
TGFBR3-208ENST00000529608 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
TGFBR3-208ENST00000529608 KLRG1Q96E93 195 aa11.66□□□□□ -0.54
TGFBR3-208ENST00000529608 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
TGFBR3-208ENST00000529608 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
TGFBR3-208ENST00000529608 COL11A2P13942 1736 aaPredicted RBP11.66□□□□□ -0.54
TGFBR3-208ENST00000529608 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
TGFBR3-208ENST00000529608 JMYQ8N9B5 988 aa11.65□□□□□ -0.54
TGFBR3-208ENST00000529608 SLC52A2Q9HAB3 445 aa11.65□□□□□ -0.54
TGFBR3-208ENST00000529608 ZBTB1Q9Y2K1 713 aa11.65□□□□□ -0.54
TGFBR3-208ENST00000529608 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
TGFBR3-208ENST00000529608 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms