RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 ZNF790Q6PG37 636 aa27.68■■■□□ 2.02
SMIM19-208ENST00000529505 TTC5Q8N0Z6 440 aa27.68■■■□□ 2.02
SMIM19-208ENST00000529505 ADCY9O60503 1353 aa27.68■■■□□ 2.02
SMIM19-208ENST00000529505 BTBD11A6QL63 1104 aa27.67■■■□□ 2.02
SMIM19-208ENST00000529505 RIPK4P57078 832 aa27.67■■■□□ 2.02
SMIM19-208ENST00000529505 INTS5Q6P9B9 1019 aaKnown RBP27.67■■■□□ 2.02
SMIM19-208ENST00000529505 N4BP2Q86UW6 1770 aaPredicted RBP27.66■■■□□ 2.02
SMIM19-208ENST00000529505 DCTN1Q14203 1278 aa27.66■■■□□ 2.02
SMIM19-208ENST00000529505 TAF7Q15545 349 aaPredicted RBP27.66■■■□□ 2.02
SMIM19-208ENST00000529505 PNISRQ8TF01 805 aaKnown RBP27.66■■■□□ 2.02
SMIM19-208ENST00000529505 WWC3Q9ULE0 1092 aa27.66■■■□□ 2.02
SMIM19-208ENST00000529505 ATP10DQ9P241 1426 aa27.66■■■□□ 2.02
SMIM19-208ENST00000529505 USP42Q9H9J4 1324 aaKnown RBP27.66■■■□□ 2.02
SMIM19-208ENST00000529505 UBR2Q8IWV8 1755 aa27.65■■■□□ 2.02
SMIM19-208ENST00000529505 TGFB2P61812 414 aa27.65■■■□□ 2.02
SMIM19-208ENST00000529505 LMOD3Q0VAK6 560 aa27.65■■■□□ 2.02
SMIM19-208ENST00000529505 DNAJC10Q8IXB1 793 aa27.65■■■□□ 2.02
SMIM19-208ENST00000529505 CCDC146Q8IYE0 955 aa27.65■■■□□ 2.02
SMIM19-208ENST00000529505 GIGYF1O75420 1035 aaPredicted RBP27.64■■■□□ 2.02
SMIM19-208ENST00000529505 MRS2Q9HD23 443 aa27.64■■■□□ 2.02
SMIM19-208ENST00000529505 CCDC87Q9NVE4 849 aa27.63■■■□□ 2.01
SMIM19-208ENST00000529505 SRP68Q9UHB9 627 aaKnown RBP27.63■■■□□ 2.01
SMIM19-208ENST00000529505 BRCA1P38398 1863 aaKnown RBP27.63■■■□□ 2.01
SMIM19-208ENST00000529505 PARP3Q9Y6F1 533 aa27.62■■■□□ 2.01
SMIM19-208ENST00000529505 CYP19A1P11511 503 aaPredicted RBP27.61■■■□□ 2.01
SMIM19-208ENST00000529505 ZNF496Q96IT1 587 aaPredicted RBP27.61■■■□□ 2.01
SMIM19-208ENST00000529505 FMNL2Q96PY5 1086 aa27.61■■■□□ 2.01
SMIM19-208ENST00000529505 TEX13AQ9BXU3 409 aaPredicted RBP27.61■■■□□ 2.01
SMIM19-208ENST00000529505 SOS1Q07889 1333 aaPredicted RBP27.61■■■□□ 2.01
SMIM19-208ENST00000529505 FKBP8Q14318 412 aa27.6■■■□□ 2.01
SMIM19-208ENST00000529505 SIPA1L3O60292 1781 aaPredicted RBP27.59■■■□□ 2.01
SMIM19-208ENST00000529505 A0A0G2JLW4 131 aa27.58■■■□□ 2.01
SMIM19-208ENST00000529505 DDR1Q08345 913 aa27.58■■■□□ 2.01
SMIM19-208ENST00000529505 BABAM1Q9NWV8 329 aa27.58■■■□□ 2.01
SMIM19-208ENST00000529505 HEG1Q9ULI3 1381 aa27.57■■■□□ 2
SMIM19-208ENST00000529505 KCNQ3O43525 872 aa27.56■■■□□ 2
SMIM19-208ENST00000529505 STARD3NLO95772 234 aa27.56■■■□□ 2
SMIM19-208ENST00000529505 DPEP1P16444 411 aa27.56■■■□□ 2
SMIM19-208ENST00000529505 RRP7AQ9Y3A4 280 aaKnown RBP27.56■■■□□ 2
SMIM19-208ENST00000529505 NEUROD2Q15784 382 aa27.55■■■□□ 2
SMIM19-208ENST00000529505 THUMPD2Q9BTF0 503 aaKnown RBP27.55■■■□□ 2
SMIM19-208ENST00000529505 TRIM35Q9UPQ4 493 aa27.55■■■□□ 2
SMIM19-208ENST00000529505 DLG5Q8TDM6 1919 aa27.55■■■□□ 2
SMIM19-208ENST00000529505 APAF1O14727 1248 aa27.54■■■□□ 2
SMIM19-208ENST00000529505 KCNA3P22001 575 aa27.54■■■□□ 2
SMIM19-208ENST00000529505 TM4SF1P30408 202 aa27.54■■■□□ 2
SMIM19-208ENST00000529505 COL15A1P39059 1388 aa27.54■■■□□ 2
SMIM19-208ENST00000529505 ZBTB1Q9Y2K1 713 aa27.54■■■□□ 2
SMIM19-208ENST00000529505 SENP3-EIF4A1A0A087X0R7 540 aa27.53■■■□□ 2
SMIM19-208ENST00000529505 USPL1Q5W0Q7 1092 aa27.53■■■□□ 2
SMIM19-208ENST00000529505 BCS1LQ9Y276 419 aa27.53■■■□□ 2
SMIM19-208ENST00000529505 ARFGEF1Q9Y6D6 1849 aa27.53■■■□□ 2
SMIM19-208ENST00000529505 POLRMTO00411 1230 aaKnown RBP27.52■■■□□ 2
SMIM19-208ENST00000529505 ZPR1O75312 459 aa27.52■■■□□ 2
SMIM19-208ENST00000529505 SNRPA1P09661 255 aaKnown RBP27.52■■■□□ 2
SMIM19-208ENST00000529505 MIS18AQ9NYP9 233 aa27.52■■■□□ 2
SMIM19-208ENST00000529505 NCBP3Q53F19 620 aaKnown RBP27.51■■□□□ 1.99
SMIM19-208ENST00000529505 GPBP1L1Q9HC44 474 aaPredicted RBP27.51■■□□□ 1.99
SMIM19-208ENST00000529505 NARFQ9UHQ1 456 aa27.51■■□□□ 1.99
SMIM19-208ENST00000529505 NRXN2Q9P2S2 1712 aa27.5■■□□□ 1.99
SMIM19-208ENST00000529505 AFDNP55196 1824 aaKnown RBP27.48■■□□□ 1.99
SMIM19-208ENST00000529505 BCL2L12Q9HB09 334 aa27.48■■□□□ 1.99
SMIM19-208ENST00000529505 EIF4A1P60842 406 aaKnown RBP27.47■■□□□ 1.99
SMIM19-208ENST00000529505 CHL1O00533 1208 aa27.46■■□□□ 1.99
SMIM19-208ENST00000529505 NFIXQ14938 502 aa27.46■■□□□ 1.99
SMIM19-208ENST00000529505 TSPYL4Q9UJ04 414 aa27.46■■□□□ 1.99
SMIM19-208ENST00000529505 EIF5P55010 431 aaKnown RBP27.45■■□□□ 1.98
SMIM19-208ENST00000529505 CALD1Q05682 793 aaKnown RBP27.45■■□□□ 1.98
SMIM19-208ENST00000529505 ZNF526Q8TF50 670 aaPredicted RBP27.45■■□□□ 1.98
SMIM19-208ENST00000529505 PIM2Q9P1W9 311 aa27.45■■□□□ 1.98
SMIM19-208ENST00000529505 USP16Q9Y5T5 823 aa27.45■■□□□ 1.98
SMIM19-208ENST00000529505 CCDC27Q2M243 656 aa27.44■■□□□ 1.98
SMIM19-208ENST00000529505 CCER2I3L3R5 266 aa27.43■■□□□ 1.98
SMIM19-208ENST00000529505 CANXP27824 592 aaKnown RBP27.43■■□□□ 1.98
SMIM19-208ENST00000529505 ARHGAP27Q6ZUM4 889 aa27.43■■□□□ 1.98
SMIM19-208ENST00000529505 CHRNA5P30532 468 aa27.42■■□□□ 1.98
SMIM19-208ENST00000529505 IL6STP40189 918 aaPredicted RBP27.42■■□□□ 1.98
SMIM19-208ENST00000529505 CFAP44Q96MT7 982 aa27.42■■□□□ 1.98
SMIM19-208ENST00000529505 SCN7AQ01118 1682 aa27.42■■□□□ 1.98
SMIM19-208ENST00000529505 A0A087WZG4 1122 aa27.41■■□□□ 1.98
SMIM19-208ENST00000529505 PRAMEF22A3QJZ6 481 aa27.4■■□□□ 1.98
SMIM19-208ENST00000529505 A1BGP04217 495 aa27.4■■□□□ 1.98
SMIM19-208ENST00000529505 DALRD3Q5D0E6 543 aaKnown RBP27.4■■□□□ 1.98
SMIM19-208ENST00000529505 CEP350Q5VT06 3117 aa27.4■■□□□ 1.98
SMIM19-208ENST00000529505 DLEC1Q9Y238 1755 aa27.4■■□□□ 1.98
SMIM19-208ENST00000529505 DIEXFQ68CQ4 756 aaKnown RBP27.39■■□□□ 1.98
SMIM19-208ENST00000529505 FAM9BQ8IZU0 186 aa27.39■■□□□ 1.98
SMIM19-208ENST00000529505 KIF3CO14782 793 aa27.38■■□□□ 1.97
SMIM19-208ENST00000529505 ZNF853P0CG23 659 aa27.38■■□□□ 1.97
SMIM19-208ENST00000529505 NGEFQ8N5V2 710 aa27.38■■□□□ 1.97
SMIM19-208ENST00000529505 SERPINB2P05120 415 aa27.37■■□□□ 1.97
SMIM19-208ENST00000529505 IFT57Q9NWB7 429 aa27.37■■□□□ 1.97
SMIM19-208ENST00000529505 KDM3BQ7LBC6 1761 aa27.37■■□□□ 1.97
SMIM19-208ENST00000529505 LAS1LQ9Y4W2 734 aaKnown RBP27.36■■□□□ 1.97
SMIM19-208ENST00000529505 GNAI1P63096 354 aa27.35■■□□□ 1.97
SMIM19-208ENST00000529505 NPM2Q86SE8 214 aaKnown RBP27.35■■□□□ 1.97
SMIM19-208ENST00000529505 WWC1Q8IX03 1113 aa27.35■■□□□ 1.97
SMIM19-208ENST00000529505 CARMIL3Q8ND23 1372 aa27.35■■□□□ 1.97
SMIM19-208ENST00000529505 SBF1O95248 1867 aa27.34■■□□□ 1.97
SMIM19-208ENST00000529505 C9orf131Q5VYM1 1079 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms