RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 ATG3Q9NT62 314 aa8.03□□□□□ -1.12
MACF1-228ENST00000528611 DOT1LQ8TEK3 1739 aa8.03□□□□□ -1.12
MACF1-228ENST00000528611 TOGARAM1Q9Y4F4 1720 aa8.03□□□□□ -1.12
MACF1-228ENST00000528611 FANCIQ9NVI1 1328 aa8.03□□□□□ -1.12
MACF1-228ENST00000528611 UBR2Q8IWV8 1755 aa8.02□□□□□ -1.13
MACF1-228ENST00000528611 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
MACF1-228ENST00000528611 STARD3NLO95772 234 aa8.02□□□□□ -1.13
MACF1-228ENST00000528611 SF3B2Q13435 895 aaKnown RBP8.02□□□□□ -1.13
MACF1-228ENST00000528611 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.13
MACF1-228ENST00000528611 CACNA1FO60840 1977 aa8.02□□□□□ -1.13
MACF1-228ENST00000528611 BAG6P46379 1132 aa8.01□□□□□ -1.13
MACF1-228ENST00000528611 SYTL4Q96C24 671 aaPredicted RBP8.01□□□□□ -1.13
MACF1-228ENST00000528611 OTUD5Q96G74 571 aa8.01□□□□□ -1.13
MACF1-228ENST00000528611 LY75O60449 1722 aa8□□□□□ -1.13
MACF1-228ENST00000528611 PALLDQ8WX93 1383 aa8□□□□□ -1.13
MACF1-228ENST00000528611 KCPQ6ZWJ8 1503 aa8□□□□□ -1.13
MACF1-228ENST00000528611 LOC102724428A0A0B4J2F2 783 aa8□□□□□ -1.13
MACF1-228ENST00000528611 KCNQ2O43526 872 aa8□□□□□ -1.13
MACF1-228ENST00000528611 VAMP4O75379 141 aa8□□□□□ -1.13
MACF1-228ENST00000528611 TRIM37O94972 964 aa8□□□□□ -1.13
MACF1-228ENST00000528611 SIK1P57059 783 aa8□□□□□ -1.13
MACF1-228ENST00000528611 TWISTNBQ3B726 338 aaPredicted RBP8□□□□□ -1.13
MACF1-228ENST00000528611 CCDC30Q5VVM6 783 aa8□□□□□ -1.13
MACF1-228ENST00000528611 ZNF496Q96IT1 587 aaPredicted RBP8□□□□□ -1.13
MACF1-228ENST00000528611 THUMPD2Q9BTF0 503 aaKnown RBP8□□□□□ -1.13
MACF1-228ENST00000528611 DBF4Q9UBU7 674 aaPredicted RBP8□□□□□ -1.13
MACF1-228ENST00000528611 SALL2Q9Y467 1007 aaPredicted RBP8□□□□□ -1.13
MACF1-228ENST00000528611 IBTKQ9P2D0 1353 aaPredicted RBP7.99□□□□□ -1.13
MACF1-228ENST00000528611 BTAF1O14981 1849 aa7.99□□□□□ -1.13
MACF1-228ENST00000528611 CENPBP07199 599 aaPredicted RBP7.99□□□□□ -1.13
MACF1-228ENST00000528611 FLAD1Q8NFF5 587 aa7.99□□□□□ -1.13
MACF1-228ENST00000528611 ARHGAP45Q92619 1136 aa7.99□□□□□ -1.13
MACF1-228ENST00000528611 ACSBG1Q96GR2 724 aa7.99□□□□□ -1.13
MACF1-228ENST00000528611 ASAP1Q9ULH1 1129 aa7.99□□□□□ -1.13
MACF1-228ENST00000528611 CNTNAP4Q9C0A0 1308 aa7.99□□□□□ -1.13
MACF1-228ENST00000528611 EP400Q96L91 3159 aa7.98□□□□□ -1.13
MACF1-228ENST00000528611 GALR2O43603 387 aaPredicted RBP7.98□□□□□ -1.13
MACF1-228ENST00000528611 APBA3O96018 575 aa7.98□□□□□ -1.13
MACF1-228ENST00000528611 MS4A1P11836 297 aa7.98□□□□□ -1.13
MACF1-228ENST00000528611 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
MACF1-228ENST00000528611 IL6STP40189 918 aaPredicted RBP7.98□□□□□ -1.13
MACF1-228ENST00000528611 EXOSC9Q06265 439 aaKnown RBP7.98□□□□□ -1.13
MACF1-228ENST00000528611 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
MACF1-228ENST00000528611 STK31Q9BXU1 1019 aa7.98□□□□□ -1.13
MACF1-228ENST00000528611 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
MACF1-228ENST00000528611 HYPKQ9NX55 129 aa7.98□□□□□ -1.13
MACF1-228ENST00000528611 LAS1LQ9Y4W2 734 aaKnown RBP7.98□□□□□ -1.13
MACF1-228ENST00000528611 C5P01031 1676 aa7.98□□□□□ -1.13
MACF1-228ENST00000528611 TNS1Q9HBL0 1735 aaKnown RBP7.98□□□□□ -1.13
MACF1-228ENST00000528611 A0A087WZG4 1122 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 IPO8O15397 1037 aaKnown RBP7.97□□□□□ -1.13
MACF1-228ENST00000528611 CYP19A1P11511 503 aaPredicted RBP7.97□□□□□ -1.13
MACF1-228ENST00000528611 SLC39A6Q13433 755 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 TXNRD1Q16881 649 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 HDGFL1Q5TGJ6 251 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 NPM2Q86SE8 214 aaKnown RBP7.97□□□□□ -1.13
MACF1-228ENST00000528611 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.97□□□□□ -1.13
MACF1-228ENST00000528611 C8orf58Q8NAV2 365 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 TSR2Q969E8 191 aaKnown RBP7.97□□□□□ -1.13
MACF1-228ENST00000528611 CAMKK2Q96RR4 588 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 CREBZFQ9NS37 354 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 CCNL1Q9UK58 526 aaPredicted RBP7.97□□□□□ -1.13
MACF1-228ENST00000528611 PTPRCP08575 1304 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 KIF16BQ96L93 1317 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 LAMB4A4D0S4 1761 aa7.97□□□□□ -1.13
MACF1-228ENST00000528611 POTEB2H3BUK9 544 aa7.96□□□□□ -1.14
MACF1-228ENST00000528611 PTCD1O75127 700 aaKnown RBP7.96□□□□□ -1.14
MACF1-228ENST00000528611 FAM182BQ5T319 152 aa7.96□□□□□ -1.14
MACF1-228ENST00000528611 MIS18AQ9NYP9 233 aa7.96□□□□□ -1.14
MACF1-228ENST00000528611 RREB1Q92766 1687 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 ERVV-1B6SEH8 477 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 KCNQ3O43525 872 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 RPS6KA4O75676 772 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 DDX58O95786 925 aaKnown RBP7.95□□□□□ -1.14
MACF1-228ENST00000528611 SSFA2P28290 1259 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 RARSP54136 660 aaKnown RBP7.95□□□□□ -1.14
MACF1-228ENST00000528611 AAMPQ13685 434 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 CLEC4GQ6UXB4 293 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 UPF1Q92900 1129 aaKnown RBP eCLIP7.95□□□□□ -1.14
MACF1-228ENST00000528611 YTHDC1Q96MU7 727 aaKnown RBP7.95□□□□□ -1.14
MACF1-228ENST00000528611 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 CHMP4BQ9H444 224 aaKnown RBP7.95□□□□□ -1.14
MACF1-228ENST00000528611 CCDC87Q9NVE4 849 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 RCAN3Q9UKA8 241 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 USP16Q9Y5T5 823 aa7.95□□□□□ -1.14
MACF1-228ENST00000528611 COL5A3P25940 1745 aaPredicted RBP7.95□□□□□ -1.14
MACF1-228ENST00000528611 EIF5P55010 431 aaKnown RBP7.94□□□□□ -1.14
MACF1-228ENST00000528611 NBPF14Q5TI25 921 aa7.94□□□□□ -1.14
MACF1-228ENST00000528611 DNAJC10Q8IXB1 793 aa7.94□□□□□ -1.14
MACF1-228ENST00000528611 PROM2Q8N271 834 aa7.94□□□□□ -1.14
MACF1-228ENST00000528611 TSPYL6Q8N831 410 aa7.94□□□□□ -1.14
MACF1-228ENST00000528611 SLC16A10Q8TF71 515 aa7.94□□□□□ -1.14
MACF1-228ENST00000528611 API5Q9BZZ5 524 aaKnown RBP7.94□□□□□ -1.14
MACF1-228ENST00000528611 RTCBQ9Y3I0 505 aaKnown RBP7.94□□□□□ -1.14
MACF1-228ENST00000528611 TJP1Q07157 1748 aa7.94□□□□□ -1.14
MACF1-228ENST00000528611 TAF1LQ8IZX4 1826 aa7.94□□□□□ -1.14
MACF1-228ENST00000528611 POTEMA6NI47 508 aa7.93□□□□□ -1.14
MACF1-228ENST00000528611 CRKLP46109 303 aaKnown RBP7.93□□□□□ -1.14
MACF1-228ENST00000528611 ITPK1Q13572 414 aa7.93□□□□□ -1.14
MACF1-228ENST00000528611 PDE3AQ14432 1141 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms