RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 PCDHB11Q9Y5F2 797 aa12.83□□□□□ -0.36
COMMD9-205ENST00000528608 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
COMMD9-205ENST00000528608 FAM181BA6NEQ2 426 aa12.82□□□□□ -0.36
COMMD9-205ENST00000528608 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
COMMD9-205ENST00000528608 KDM5CP41229 1560 aa12.81□□□□□ -0.36
COMMD9-205ENST00000528608 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
COMMD9-205ENST00000528608 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
COMMD9-205ENST00000528608 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
COMMD9-205ENST00000528608 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
COMMD9-205ENST00000528608 ZFYVE16Q7Z3T8 1539 aa12.8□□□□□ -0.36
COMMD9-205ENST00000528608 ARHGEF40Q8TER5 1519 aa12.8□□□□□ -0.36
COMMD9-205ENST00000528608 SLC35F4A4IF30 521 aa12.8□□□□□ -0.36
COMMD9-205ENST00000528608 ESF1Q9H501 851 aaKnown RBP12.8□□□□□ -0.36
COMMD9-205ENST00000528608 MYOM3Q5VTT5 1437 aa12.79□□□□□ -0.36
COMMD9-205ENST00000528608 SIGLEC1Q9BZZ2 1709 aa12.79□□□□□ -0.36
COMMD9-205ENST00000528608 MAGI2Q86UL8 1455 aa12.79□□□□□ -0.36
COMMD9-205ENST00000528608 LYSMD3Q7Z3D4 306 aa12.79□□□□□ -0.36
COMMD9-205ENST00000528608 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
COMMD9-205ENST00000528608 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
COMMD9-205ENST00000528608 MEN1O00255 615 aa12.78□□□□□ -0.36
COMMD9-205ENST00000528608 CYP2U1Q7Z449 544 aa12.78□□□□□ -0.36
COMMD9-205ENST00000528608 MLH3Q9UHC1 1453 aa12.78□□□□□ -0.36
COMMD9-205ENST00000528608 SCTRP47872 440 aa12.77□□□□□ -0.37
COMMD9-205ENST00000528608 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.37
COMMD9-205ENST00000528608 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
COMMD9-205ENST00000528608 CDC14CA4D256 554 aa12.76□□□□□ -0.37
COMMD9-205ENST00000528608 ITGA6P23229 1130 aa12.76□□□□□ -0.37
COMMD9-205ENST00000528608 LORP23490 312 aaPredicted RBP12.76□□□□□ -0.37
COMMD9-205ENST00000528608 RNF144AP50876 292 aaPredicted RBP12.76□□□□□ -0.37
COMMD9-205ENST00000528608 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
COMMD9-205ENST00000528608 MIA2Q96PC5 1412 aa12.76□□□□□ -0.37
COMMD9-205ENST00000528608 ATP10AO60312 1499 aa12.76□□□□□ -0.37
COMMD9-205ENST00000528608 A0A1W2PRU2 124 aa12.75□□□□□ -0.37
COMMD9-205ENST00000528608 SPAG9O60271 1321 aaKnown RBP12.75□□□□□ -0.37
COMMD9-205ENST00000528608 PRICKLE2Q7Z3G6 844 aa12.75□□□□□ -0.37
COMMD9-205ENST00000528608 ABCA6Q8N139 1617 aa12.75□□□□□ -0.37
COMMD9-205ENST00000528608 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
COMMD9-205ENST00000528608 CEP126Q9P2H0 1117 aa12.75□□□□□ -0.37
COMMD9-205ENST00000528608 DIP2CQ9Y2E4 1556 aa12.75□□□□□ -0.37
COMMD9-205ENST00000528608 ARID4BQ4LE39 1312 aaPredicted RBP12.74□□□□□ -0.37
COMMD9-205ENST00000528608 IRF5Q13568 498 aa12.74□□□□□ -0.37
COMMD9-205ENST00000528608 GPR161Q8N6U8 529 aaKnown RBP12.74□□□□□ -0.37
COMMD9-205ENST00000528608 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
COMMD9-205ENST00000528608 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
COMMD9-205ENST00000528608 GPC1P35052 558 aa12.73□□□□□ -0.37
COMMD9-205ENST00000528608 GDPD2Q9HCC8 539 aa12.73□□□□□ -0.37
COMMD9-205ENST00000528608 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
COMMD9-205ENST00000528608 INO80Q9ULG1 1556 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-205ENST00000528608 C9orf84Q5VXU9 1444 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 FGD6Q6ZV73 1430 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 RHOQP17081 205 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 ABL2P42684 1182 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 VWA5B2Q8N398 1253 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 OSBPL3Q9H4L5 887 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 ARHGEF10LQ9HCE6 1279 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 ATP7AQ04656 1500 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
COMMD9-205ENST00000528608 BCORL1Q5H9F3 1711 aa12.71□□□□□ -0.37
COMMD9-205ENST00000528608 MYCP01106 439 aaPredicted RBP12.71□□□□□ -0.37
COMMD9-205ENST00000528608 MLECQ14165 292 aa12.71□□□□□ -0.37
COMMD9-205ENST00000528608 SV2AQ7L0J3 742 aa12.71□□□□□ -0.37
COMMD9-205ENST00000528608 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
COMMD9-205ENST00000528608 TRAK2O60296 914 aa12.7□□□□□ -0.38
COMMD9-205ENST00000528608 VAC14Q08AM6 782 aa12.7□□□□□ -0.38
COMMD9-205ENST00000528608 MCM6Q14566 821 aa12.7□□□□□ -0.38
COMMD9-205ENST00000528608 SLC27A3Q5K4L6 730 aa12.7□□□□□ -0.38
COMMD9-205ENST00000528608 CNTNAP3BQ96NU0 1288 aa12.7□□□□□ -0.38
COMMD9-205ENST00000528608 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
COMMD9-205ENST00000528608 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
COMMD9-205ENST00000528608 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
COMMD9-205ENST00000528608 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
COMMD9-205ENST00000528608 CLN3Q13286 438 aa12.69□□□□□ -0.38
COMMD9-205ENST00000528608 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
COMMD9-205ENST00000528608 REREQ9P2R6 1566 aa12.69□□□□□ -0.38
COMMD9-205ENST00000528608 KRT76Q01546 638 aa12.68□□□□□ -0.38
COMMD9-205ENST00000528608 SLFNL1Q499Z3 407 aa12.68□□□□□ -0.38
COMMD9-205ENST00000528608 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
COMMD9-205ENST00000528608 ABCC5O15440 1437 aa12.68□□□□□ -0.38
COMMD9-205ENST00000528608 TSPY4P0CV99 314 aa12.67□□□□□ -0.38
COMMD9-205ENST00000528608 TSPY10P0CW01 314 aa12.67□□□□□ -0.38
COMMD9-205ENST00000528608 RNF135Q8IUD6 432 aa12.67□□□□□ -0.38
COMMD9-205ENST00000528608 RAB6BQ9NRW1 208 aa12.67□□□□□ -0.38
COMMD9-205ENST00000528608 DOLKQ9UPQ8 538 aa12.67□□□□□ -0.38
COMMD9-205ENST00000528608 MADDQ8WXG6 1647 aa12.66□□□□□ -0.38
COMMD9-205ENST00000528608 A2MP01023 1474 aa12.66□□□□□ -0.38
COMMD9-205ENST00000528608 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
COMMD9-205ENST00000528608 WASHC4Q2M389 1173 aa12.66□□□□□ -0.38
COMMD9-205ENST00000528608 AGLP35573 1532 aa12.66□□□□□ -0.38
COMMD9-205ENST00000528608 DAPK1P53355 1430 aa12.65□□□□□ -0.38
COMMD9-205ENST00000528608 ADGBQ8N7X0 1667 aa12.65□□□□□ -0.38
COMMD9-205ENST00000528608 GNRH1P01148 92 aa12.65□□□□□ -0.38
COMMD9-205ENST00000528608 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
COMMD9-205ENST00000528608 MAST1Q9Y2H9 1570 aa12.64□□□□□ -0.39
COMMD9-205ENST00000528608 DNMT1P26358 1616 aaKnown RBP12.64□□□□□ -0.39
COMMD9-205ENST00000528608 POU4F2Q12837 409 aa12.64□□□□□ -0.39
COMMD9-205ENST00000528608 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
COMMD9-205ENST00000528608 RNFT1Q5M7Z0 435 aa12.63□□□□□ -0.39
COMMD9-205ENST00000528608 GRIP2Q9C0E4 1043 aa12.63□□□□□ -0.39
COMMD9-205ENST00000528608 CUEDC1Q9NWM3 386 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms