RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 ZBTB1Q9Y2K1 713 aa18.5■□□□□ 0.55
CHRDL2-205ENST00000528471 AFDNP55196 1824 aaKnown RBP18.5■□□□□ 0.55
CHRDL2-205ENST00000528471 HEG1Q9ULI3 1381 aa18.5■□□□□ 0.55
CHRDL2-205ENST00000528471 FKBP8Q14318 412 aa18.49■□□□□ 0.55
CHRDL2-205ENST00000528471 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
CHRDL2-205ENST00000528471 BTBD11A6QL63 1104 aa18.49■□□□□ 0.55
CHRDL2-205ENST00000528471 FMNL2Q96PY5 1086 aa18.49■□□□□ 0.55
CHRDL2-205ENST00000528471 SCN7AQ01118 1682 aa18.48■□□□□ 0.55
CHRDL2-205ENST00000528471 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
CHRDL2-205ENST00000528471 USPL1Q5W0Q7 1092 aa18.48■□□□□ 0.55
CHRDL2-205ENST00000528471 TEX13AQ9BXU3 409 aaPredicted RBP18.48■□□□□ 0.55
CHRDL2-205ENST00000528471 TGFB2P61812 414 aa18.47■□□□□ 0.55
CHRDL2-205ENST00000528471 MCM10Q7L590 875 aa18.47■□□□□ 0.55
CHRDL2-205ENST00000528471 ARFGEF1Q9Y6D6 1849 aa18.46■□□□□ 0.55
CHRDL2-205ENST00000528471 DDR1Q08345 913 aa18.46■□□□□ 0.55
CHRDL2-205ENST00000528471 DDX10Q13206 875 aaKnown RBP18.46■□□□□ 0.55
CHRDL2-205ENST00000528471 NARFQ9UHQ1 456 aa18.46■□□□□ 0.55
CHRDL2-205ENST00000528471 HTATSF1O43719 755 aaKnown RBP18.45■□□□□ 0.54
CHRDL2-205ENST00000528471 RALBP1Q15311 655 aa18.45■□□□□ 0.54
CHRDL2-205ENST00000528471 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
CHRDL2-205ENST00000528471 LAMB4A4D0S4 1761 aa18.44■□□□□ 0.54
CHRDL2-205ENST00000528471 A0A0G2JLW4 131 aa18.44■□□□□ 0.54
CHRDL2-205ENST00000528471 NPM2Q86SE8 214 aaKnown RBP18.44■□□□□ 0.54
CHRDL2-205ENST00000528471 MAPK8IP3Q9UPT6 1336 aa18.44■□□□□ 0.54
CHRDL2-205ENST00000528471 NRXN2Q9P2S2 1712 aa18.44■□□□□ 0.54
CHRDL2-205ENST00000528471 KDM3BQ7LBC6 1761 aa18.43■□□□□ 0.54
CHRDL2-205ENST00000528471 BCORQ6W2J9 1755 aa18.43■□□□□ 0.54
CHRDL2-205ENST00000528471 A0A087WZG4 1122 aa18.43■□□□□ 0.54
CHRDL2-205ENST00000528471 DCTN1Q14203 1278 aa18.43■□□□□ 0.54
CHRDL2-205ENST00000528471 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
CHRDL2-205ENST00000528471 POLRMTO00411 1230 aaKnown RBP18.42■□□□□ 0.54
CHRDL2-205ENST00000528471 KCNQ3O43525 872 aa18.42■□□□□ 0.54
CHRDL2-205ENST00000528471 DPEP1P16444 411 aa18.42■□□□□ 0.54
CHRDL2-205ENST00000528471 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
CHRDL2-205ENST00000528471 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
CHRDL2-205ENST00000528471 DLEC1Q9Y238 1755 aa18.41■□□□□ 0.54
CHRDL2-205ENST00000528471 TM4SF1P30408 202 aa18.41■□□□□ 0.54
CHRDL2-205ENST00000528471 ATP10DQ9P241 1426 aa18.4■□□□□ 0.54
CHRDL2-205ENST00000528471 IL6STP40189 918 aaPredicted RBP18.4■□□□□ 0.54
CHRDL2-205ENST00000528471 NFIXQ14938 502 aa18.4■□□□□ 0.54
CHRDL2-205ENST00000528471 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.53
CHRDL2-205ENST00000528471 A1BGP04217 495 aa18.39■□□□□ 0.53
CHRDL2-205ENST00000528471 NFE2L2Q16236 605 aa18.39■□□□□ 0.53
CHRDL2-205ENST00000528471 PLEKHF1Q96S99 279 aa18.39■□□□□ 0.53
CHRDL2-205ENST00000528471 BCL2L12Q9HB09 334 aa18.39■□□□□ 0.53
CHRDL2-205ENST00000528471 SNRPA1P09661 255 aaKnown RBP18.38■□□□□ 0.53
CHRDL2-205ENST00000528471 TAF7Q15545 349 aaPredicted RBP18.38■□□□□ 0.53
CHRDL2-205ENST00000528471 BICDL1Q6ZP65 573 aa18.37■□□□□ 0.53
CHRDL2-205ENST00000528471 PIM2Q9P1W9 311 aa18.37■□□□□ 0.53
CHRDL2-205ENST00000528471 TBC1D2BQ9UPU7 963 aa18.37■□□□□ 0.53
CHRDL2-205ENST00000528471 ADCY9O60503 1353 aa18.36■□□□□ 0.53
CHRDL2-205ENST00000528471 ANKRD31Q8N7Z5 1873 aa18.36■□□□□ 0.53
CHRDL2-205ENST00000528471 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
CHRDL2-205ENST00000528471 SERPINB2P05120 415 aa18.36■□□□□ 0.53
CHRDL2-205ENST00000528471 PNISRQ8TF01 805 aaKnown RBP18.36■□□□□ 0.53
CHRDL2-205ENST00000528471 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
CHRDL2-205ENST00000528471 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
CHRDL2-205ENST00000528471 CHRNA5P30532 468 aa18.35■□□□□ 0.53
CHRDL2-205ENST00000528471 DALRD3Q5D0E6 543 aaKnown RBP18.35■□□□□ 0.53
CHRDL2-205ENST00000528471 ARHGAP27Q6ZUM4 889 aa18.35■□□□□ 0.53
CHRDL2-205ENST00000528471 KCNA3P22001 575 aa18.34■□□□□ 0.53
CHRDL2-205ENST00000528471 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
CHRDL2-205ENST00000528471 DZIP3Q86Y13 1208 aaKnown RBP18.34■□□□□ 0.53
CHRDL2-205ENST00000528471 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
CHRDL2-205ENST00000528471 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
CHRDL2-205ENST00000528471 CACNA1SQ13698 1873 aa18.33■□□□□ 0.53
CHRDL2-205ENST00000528471 TBC1D9BQ66K14 1250 aa18.33■□□□□ 0.53
CHRDL2-205ENST00000528471 ZNF526Q8TF50 670 aaPredicted RBP18.33■□□□□ 0.53
CHRDL2-205ENST00000528471 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.53
CHRDL2-205ENST00000528471 SBF1O95248 1867 aa18.32■□□□□ 0.52
CHRDL2-205ENST00000528471 COL11A2P13942 1736 aaPredicted RBP18.32■□□□□ 0.52
CHRDL2-205ENST00000528471 WDR43Q15061 677 aaKnown RBP eCLIP18.32■□□□□ 0.52
CHRDL2-205ENST00000528471 GPBP1L1Q9HC44 474 aaPredicted RBP18.32■□□□□ 0.52
CHRDL2-205ENST00000528471 NPHP1O15259 732 aa18.31■□□□□ 0.52
CHRDL2-205ENST00000528471 CAMTA2O94983 1202 aa18.31■□□□□ 0.52
CHRDL2-205ENST00000528471 C1QTNF8P60827 252 aa18.3■□□□□ 0.52
CHRDL2-205ENST00000528471 LMOD3Q0VAK6 560 aa18.3■□□□□ 0.52
CHRDL2-205ENST00000528471 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
CHRDL2-205ENST00000528471 ZNF652Q9Y2D9 606 aa18.3■□□□□ 0.52
CHRDL2-205ENST00000528471 CCDC88AQ3V6T2 1871 aa18.3■□□□□ 0.52
CHRDL2-205ENST00000528471 RIPK4P57078 832 aa18.29■□□□□ 0.52
CHRDL2-205ENST00000528471 C2CD5Q86YS7 1000 aa18.29■□□□□ 0.52
CHRDL2-205ENST00000528471 NUP98P52948 1817 aa18.29■□□□□ 0.52
CHRDL2-205ENST00000528471 H0YIN7 160 aa18.28■□□□□ 0.52
CHRDL2-205ENST00000528471 CNBD1Q8NA66 436 aa18.28■□□□□ 0.52
CHRDL2-205ENST00000528471 NBPF26B4DH59 902 aa18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 TMPOP42166 694 aaKnown RBP18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 PRR5LQ6MZQ0 368 aa18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 NBPF15Q8N660 670 aa18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 TSPYL4Q9UJ04 414 aa18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 ARFGEF2Q9Y6D5 1785 aa18.27■□□□□ 0.52
CHRDL2-205ENST00000528471 PDE6BP35913 854 aa18.26■□□□□ 0.51
CHRDL2-205ENST00000528471 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
CHRDL2-205ENST00000528471 ST5P78524 1137 aa18.26■□□□□ 0.51
CHRDL2-205ENST00000528471 CLEC4GQ6UXB4 293 aa18.26■□□□□ 0.51
CHRDL2-205ENST00000528471 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
CHRDL2-205ENST00000528471 CCDC24Q8N4L8 307 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms