RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 BRPF1P55201 1214 aaPredicted RBP28.28■■■□□ 2.12
PACSIN3-205ENST00000528462 TXNRD1Q16881 649 aa28.28■■■□□ 2.12
PACSIN3-205ENST00000528462 SSH1Q8WYL5 1049 aa28.26■■■□□ 2.11
PACSIN3-205ENST00000528462 CAMKK2Q96RR4 588 aa28.26■■■□□ 2.11
PACSIN3-205ENST00000528462 LRRC4BQ9NT99 713 aa28.26■■■□□ 2.11
PACSIN3-205ENST00000528462 DBF4Q9UBU7 674 aaPredicted RBP28.26■■■□□ 2.11
PACSIN3-205ENST00000528462 BAG6P46379 1132 aa28.25■■■□□ 2.11
PACSIN3-205ENST00000528462 STK31Q9BXU1 1019 aa28.24■■■□□ 2.11
PACSIN3-205ENST00000528462 COL5A3P25940 1745 aaPredicted RBP28.24■■■□□ 2.11
PACSIN3-205ENST00000528462 PDIA6Q15084 440 aa28.24■■■□□ 2.11
PACSIN3-205ENST00000528462 RC3H1Q5TC82 1133 aaKnown RBP28.24■■■□□ 2.11
PACSIN3-205ENST00000528462 ILDR2Q71H61 639 aa28.24■■■□□ 2.11
PACSIN3-205ENST00000528462 DDX21Q9NR30 783 aaKnown RBP eCLIP28.24■■■□□ 2.11
PACSIN3-205ENST00000528462 CNTNAP4Q9C0A0 1308 aa28.23■■■□□ 2.11
PACSIN3-205ENST00000528462 LINC00116Q8NCU8 138 aa28.23■■■□□ 2.11
PACSIN3-205ENST00000528462 CHPF2Q9P2E5 772 aa28.23■■■□□ 2.11
PACSIN3-205ENST00000528462 CACNA1FO60840 1977 aa28.22■■■□□ 2.11
PACSIN3-205ENST00000528462 NECTIN2Q92692 538 aa28.22■■■□□ 2.11
PACSIN3-205ENST00000528462 UPF1Q92900 1129 aaKnown RBP eCLIP28.22■■■□□ 2.11
PACSIN3-205ENST00000528462 CRKLP46109 303 aaKnown RBP28.21■■■□□ 2.11
PACSIN3-205ENST00000528462 KCNQ4P56696 695 aa28.21■■■□□ 2.11
PACSIN3-205ENST00000528462 SMC4Q9NTJ3 1288 aa28.21■■■□□ 2.11
PACSIN3-205ENST00000528462 TAF1LQ8IZX4 1826 aa28.21■■■□□ 2.11
PACSIN3-205ENST00000528462 A1BGP04217 495 aa28.2■■■□□ 2.11
PACSIN3-205ENST00000528462 SLC4A2P04920 1241 aa28.2■■■□□ 2.11
PACSIN3-205ENST00000528462 EN1Q05925 392 aaPredicted RBP28.2■■■□□ 2.11
PACSIN3-205ENST00000528462 INTS5Q6P9B9 1019 aaKnown RBP28.2■■■□□ 2.11
PACSIN3-205ENST00000528462 MRPL50Q8N5N7 158 aaKnown RBP28.2■■■□□ 2.11
PACSIN3-205ENST00000528462 CCDC87Q9NVE4 849 aa28.2■■■□□ 2.11
PACSIN3-205ENST00000528462 HYPKQ9NX55 129 aa28.2■■■□□ 2.11
PACSIN3-205ENST00000528462 RREB1Q92766 1687 aa28.2■■■□□ 2.1
PACSIN3-205ENST00000528462 NBPF26B4DH59 902 aa28.2■■■□□ 2.1
PACSIN3-205ENST00000528462 NBPF14Q5TI25 921 aa28.2■■■□□ 2.1
PACSIN3-205ENST00000528462 NBPF10Q6P3W6 841 aaKnown RBP28.2■■■□□ 2.1
PACSIN3-205ENST00000528462 LRP10Q7Z4F1 713 aa28.2■■■□□ 2.1
PACSIN3-205ENST00000528462 NBPF15Q8N660 670 aa28.2■■■□□ 2.1
PACSIN3-205ENST00000528462 BCAR3O75815 825 aa28.18■■■□□ 2.1
PACSIN3-205ENST00000528462 TCERG1O14776 1098 aaKnown RBP28.17■■■□□ 2.1
PACSIN3-205ENST00000528462 EZH2Q15910 746 aaKnown RBP28.17■■■□□ 2.1
PACSIN3-205ENST00000528462 BCL2L13Q9BXK5 485 aa28.17■■■□□ 2.1
PACSIN3-205ENST00000528462 ZBTB1Q9Y2K1 713 aa28.17■■■□□ 2.1
PACSIN3-205ENST00000528462 MYH14Q7Z406 1995 aaKnown RBP28.17■■■□□ 2.1
PACSIN3-205ENST00000528462 KIF16BQ96L93 1317 aa28.17■■■□□ 2.1
PACSIN3-205ENST00000528462 IL6STP40189 918 aaPredicted RBP28.16■■■□□ 2.1
PACSIN3-205ENST00000528462 PROSER3Q2NL68 480 aa28.16■■■□□ 2.1
PACSIN3-205ENST00000528462 DEFB132Q7Z7B7 95 aa28.16■■■□□ 2.1
PACSIN3-205ENST00000528462 C4BP0C0L5 1744 aa28.16■■■□□ 2.1
PACSIN3-205ENST00000528462 EIF5P55010 431 aaKnown RBP28.13■■■□□ 2.09
PACSIN3-205ENST00000528462 RPS6KA4O75676 772 aa28.12■■■□□ 2.09
PACSIN3-205ENST00000528462 ANXA1P04083 346 aa28.12■■■□□ 2.09
PACSIN3-205ENST00000528462 MYL6BP14649 208 aa28.12■■■□□ 2.09
PACSIN3-205ENST00000528462 FLIIQ13045 1269 aa28.12■■■□□ 2.09
PACSIN3-205ENST00000528462 ARHGAP45Q92619 1136 aa28.12■■■□□ 2.09
PACSIN3-205ENST00000528462 RNF123Q5XPI4 1314 aa28.12■■■□□ 2.09
PACSIN3-205ENST00000528462 CANXP27824 592 aaKnown RBP28.11■■■□□ 2.09
PACSIN3-205ENST00000528462 PIP4K2AP48426 406 aaPredicted RBP28.11■■■□□ 2.09
PACSIN3-205ENST00000528462 PTPRCP08575 1304 aa28.11■■■□□ 2.09
PACSIN3-205ENST00000528462 G2E3Q7L622 706 aa28.11■■■□□ 2.09
PACSIN3-205ENST00000528462 PHAXQ9H814 394 aaKnown RBP28.11■■■□□ 2.09
PACSIN3-205ENST00000528462 IPO8O15397 1037 aaKnown RBP28.1■■■□□ 2.09
PACSIN3-205ENST00000528462 AKT1S1Q96B36 256 aa28.1■■■□□ 2.09
PACSIN3-205ENST00000528462 AK7Q96M32 723 aa28.1■■■□□ 2.09
PACSIN3-205ENST00000528462 GNPATO15228 680 aa28.09■■■□□ 2.09
PACSIN3-205ENST00000528462 NOB1Q9ULX3 412 aaKnown RBP28.09■■■□□ 2.09
PACSIN3-205ENST00000528462 RTCBQ9Y3I0 505 aaKnown RBP28.08■■■□□ 2.09
PACSIN3-205ENST00000528462 COPS6Q7L5N1 327 aa28.07■■■□□ 2.08
PACSIN3-205ENST00000528462 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.07■■■□□ 2.08
PACSIN3-205ENST00000528462 XAGE3Q8WTP9 111 aa28.07■■■□□ 2.08
PACSIN3-205ENST00000528462 ADRA2BP18089 450 aa28.07■■■□□ 2.08
PACSIN3-205ENST00000528462 ZKSCAN2Q63HK3 967 aa28.06■■■□□ 2.08
PACSIN3-205ENST00000528462 NPM2Q86SE8 214 aaKnown RBP28.06■■■□□ 2.08
PACSIN3-205ENST00000528462 COL15A1P39059 1388 aa28.05■■■□□ 2.08
PACSIN3-205ENST00000528462 NUP188Q5SRE5 1749 aa28.05■■■□□ 2.08
PACSIN3-205ENST00000528462 DDX58O95786 925 aaKnown RBP28.05■■■□□ 2.08
PACSIN3-205ENST00000528462 SSFA2P28290 1259 aa28.05■■■□□ 2.08
PACSIN3-205ENST00000528462 ATF7IPQ6VMQ6 1270 aa28.05■■■□□ 2.08
PACSIN3-205ENST00000528462 A0A087WZG4 1122 aa28.04■■■□□ 2.08
PACSIN3-205ENST00000528462 RRP1P56182 461 aaKnown RBP28.04■■■□□ 2.08
PACSIN3-205ENST00000528462 FKBP5Q13451 457 aaPredicted RBP28.04■■■□□ 2.08
PACSIN3-205ENST00000528462 FRAT1Q92837 279 aaPredicted RBP28.04■■■□□ 2.08
PACSIN3-205ENST00000528462 API5Q9BZZ5 524 aaKnown RBP28.04■■■□□ 2.08
PACSIN3-205ENST00000528462 SUPT16HQ9Y5B9 1047 aaKnown RBP28.04■■■□□ 2.08
PACSIN3-205ENST00000528462 UBR3Q6ZT12 1888 aa28.04■■■□□ 2.08
PACSIN3-205ENST00000528462 ZNF827Q17R98 1081 aa28.03■■■□□ 2.08
PACSIN3-205ENST00000528462 RGL2O15211 777 aa28.03■■■□□ 2.08
PACSIN3-205ENST00000528462 AIMP1Q12904 312 aaKnown RBP28.03■■■□□ 2.08
PACSIN3-205ENST00000528462 ANKRD13DQ6ZTN6 518 aa28.03■■■□□ 2.08
PACSIN3-205ENST00000528462 TRIM27P14373 513 aa28.02■■■□□ 2.08
PACSIN3-205ENST00000528462 KSR2Q6VAB6 950 aa28.02■■■□□ 2.08
PACSIN3-205ENST00000528462 TTLL7Q6ZT98 887 aa28.02■■■□□ 2.08
PACSIN3-205ENST00000528462 AMIGO3Q86WK7 504 aa28.02■■■□□ 2.08
PACSIN3-205ENST00000528462 PLBD2Q8NHP8 589 aa28.02■■■□□ 2.08
PACSIN3-205ENST00000528462 ZNF330Q9Y3S2 320 aaPredicted RBP28.02■■■□□ 2.08
PACSIN3-205ENST00000528462 DZIP3Q86Y13 1208 aaKnown RBP28.01■■■□□ 2.07
PACSIN3-205ENST00000528462 ANO8Q9HCE9 1232 aaPredicted RBP28.01■■■□□ 2.07
PACSIN3-205ENST00000528462 PI4KAP2A4QPH2 592 aa28■■■□□ 2.07
PACSIN3-205ENST00000528462 ERVV-1B6SEH8 477 aa28■■■□□ 2.07
PACSIN3-205ENST00000528462 SLC15A2Q16348 729 aa28■■■□□ 2.07
PACSIN3-205ENST00000528462 TRAPPC3LQ5T215 181 aa28■■■□□ 2.07
PACSIN3-205ENST00000528462 PI4KAP1Q8N8J0 262 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms