RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PPP1R42Q7Z4L9 355 aa18.82■□□□□ 0.6
USH1C-207ENST00000527720 TNPO1Q92973 898 aaKnown RBP18.82■□□□□ 0.6
USH1C-207ENST00000527720 ATF3P18847 181 aa18.81■□□□□ 0.6
USH1C-207ENST00000527720 HDAC5Q9UQL6 1122 aa18.81■□□□□ 0.6
USH1C-207ENST00000527720 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
USH1C-207ENST00000527720 HSP90AB4PQ58FF6 505 aa18.81■□□□□ 0.6
USH1C-207ENST00000527720 L1TD1Q5T7N2 865 aaKnown RBP18.81■□□□□ 0.6
USH1C-207ENST00000527720 EPB41L2O43491 1005 aaKnown RBP18.8■□□□□ 0.6
USH1C-207ENST00000527720 TRAK2O60296 914 aa18.8■□□□□ 0.6
USH1C-207ENST00000527720 ESYT1Q9BSJ8 1104 aa18.8■□□□□ 0.6
USH1C-207ENST00000527720 KIF1BPQ96EK5 621 aa18.8■□□□□ 0.6
USH1C-207ENST00000527720 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
USH1C-207ENST00000527720 MTX1Q13505 466 aa18.79■□□□□ 0.6
USH1C-207ENST00000527720 CLEC17AQ6ZS10 378 aa18.79■□□□□ 0.6
USH1C-207ENST00000527720 HYPKQ9NX55 129 aa18.79■□□□□ 0.6
USH1C-207ENST00000527720 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
USH1C-207ENST00000527720 SRGAP3O43295 1099 aa18.79■□□□□ 0.6
USH1C-207ENST00000527720 SURF6O75683 361 aaKnown RBP18.79■□□□□ 0.6
USH1C-207ENST00000527720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.79■□□□□ 0.6
USH1C-207ENST00000527720 KSR2Q6VAB6 950 aa18.78■□□□□ 0.6
USH1C-207ENST00000527720 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
USH1C-207ENST00000527720 RAPGEF4Q8WZA2 1011 aa18.78■□□□□ 0.6
USH1C-207ENST00000527720 MCCP23508 829 aa18.77■□□□□ 0.6
USH1C-207ENST00000527720 CHMLP26374 656 aa18.77■□□□□ 0.6
USH1C-207ENST00000527720 RHPN1Q8TCX5 695 aa18.77■□□□□ 0.6
USH1C-207ENST00000527720 PKD1L3Q7Z443 1732 aa18.77■□□□□ 0.6
USH1C-207ENST00000527720 CWC22Q9HCG8 908 aaKnown RBP18.77■□□□□ 0.6
USH1C-207ENST00000527720 TRIM6-TRIM34B2RNG4 842 aa18.76■□□□□ 0.59
USH1C-207ENST00000527720 ANAPC15P60006 121 aa18.76■□□□□ 0.59
USH1C-207ENST00000527720 TSHZ3Q63HK5 1081 aa18.76■□□□□ 0.59
USH1C-207ENST00000527720 C5P01031 1676 aa18.76■□□□□ 0.59
USH1C-207ENST00000527720 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
USH1C-207ENST00000527720 ZC3H6P61129 1189 aaKnown RBP18.76■□□□□ 0.59
USH1C-207ENST00000527720 SKOR2Q2VWA4 1001 aaPredicted RBP18.76■□□□□ 0.59
USH1C-207ENST00000527720 IL17RAQ96F46 866 aa18.76■□□□□ 0.59
USH1C-207ENST00000527720 TNS3Q68CZ2 1445 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 NUCB2P80303 420 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 RILPL2Q969X0 211 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 DDX21Q9NR30 783 aaKnown RBP eCLIP18.75■□□□□ 0.59
USH1C-207ENST00000527720 SPG7Q9UQ90 795 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 MAP3K2Q9Y2U5 619 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 DDX58O95786 925 aaKnown RBP18.75■□□□□ 0.59
USH1C-207ENST00000527720 ANXA1P04083 346 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 TATP17735 454 aaPredicted RBP18.75■□□□□ 0.59
USH1C-207ENST00000527720 MCM2P49736 904 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 CADPS2Q86UW7 1296 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 IL1RAPL2Q9NP60 686 aa18.75■□□□□ 0.59
USH1C-207ENST00000527720 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
USH1C-207ENST00000527720 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
USH1C-207ENST00000527720 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
USH1C-207ENST00000527720 MRC1P22897 1456 aa18.74■□□□□ 0.59
USH1C-207ENST00000527720 SLC52A2Q9HAB3 445 aa18.74■□□□□ 0.59
USH1C-207ENST00000527720 FSD2A1L4K1 749 aa18.73■□□□□ 0.59
USH1C-207ENST00000527720 NLRP2Q9NX02 1062 aa18.73■□□□□ 0.59
USH1C-207ENST00000527720 C9orf78Q9NZ63 289 aaPredicted RBP18.73■□□□□ 0.59
USH1C-207ENST00000527720 BRPF3Q9ULD4 1205 aa18.73■□□□□ 0.59
USH1C-207ENST00000527720 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
USH1C-207ENST00000527720 PHKG2P15735 406 aa18.72■□□□□ 0.59
USH1C-207ENST00000527720 PROSER3Q2NL68 480 aa18.72■□□□□ 0.59
USH1C-207ENST00000527720 ZNF790Q6PG37 636 aa18.72■□□□□ 0.59
USH1C-207ENST00000527720 LINS1Q8NG48 757 aa18.72■□□□□ 0.59
USH1C-207ENST00000527720 PI4K2BQ8TCG2 481 aa18.72■□□□□ 0.59
USH1C-207ENST00000527720 UTYO14607 1347 aa18.72■□□□□ 0.59
USH1C-207ENST00000527720 PARP4Q9UKK3 1724 aaKnown RBP18.72■□□□□ 0.59
USH1C-207ENST00000527720 TTC41PQ6P2S7 1318 aa18.72■□□□□ 0.59
USH1C-207ENST00000527720 GOLGA6L22H0YM25 854 aa18.72■□□□□ 0.59
USH1C-207ENST00000527720 MEGF6O75095 1541 aa18.71■□□□□ 0.59
USH1C-207ENST00000527720 GOLGA6L3A6NEY3 463 aa18.71■□□□□ 0.59
USH1C-207ENST00000527720 NUTM1Q86Y26 1132 aa18.71■□□□□ 0.59
USH1C-207ENST00000527720 ERC1Q8IUD2 1116 aa18.71■□□□□ 0.59
USH1C-207ENST00000527720 IFNL2Q8IZJ0 200 aa18.71■□□□□ 0.59
USH1C-207ENST00000527720 XIRP1Q702N8 1843 aaKnown RBP18.71■□□□□ 0.59
USH1C-207ENST00000527720 CPDO75976 1380 aa18.7■□□□□ 0.58
USH1C-207ENST00000527720 CYP2E1P05181 493 aaPredicted RBP18.7■□□□□ 0.58
USH1C-207ENST00000527720 SSFA2P28290 1259 aa18.7■□□□□ 0.58
USH1C-207ENST00000527720 UNC5CLQ8IV45 518 aa18.7■□□□□ 0.58
USH1C-207ENST00000527720 ANO2Q9NQ90 1003 aa18.7■□□□□ 0.58
USH1C-207ENST00000527720 PRAMEF22A3QJZ6 481 aa18.7■□□□□ 0.58
USH1C-207ENST00000527720 PDIA6Q15084 440 aa18.7■□□□□ 0.58
USH1C-207ENST00000527720 CNTROBQ8N137 903 aa18.7■□□□□ 0.58
USH1C-207ENST00000527720 LAMB4A4D0S4 1761 aa18.68■□□□□ 0.58
USH1C-207ENST00000527720 SPATA31A3Q5VYP0 1347 aa18.68■□□□□ 0.58
USH1C-207ENST00000527720 GRM8O00222 908 aa18.68■□□□□ 0.58
USH1C-207ENST00000527720 NEK4P51957 841 aa18.68■□□□□ 0.58
USH1C-207ENST00000527720 CLASRPQ8N2M8 674 aaKnown RBP18.68■□□□□ 0.58
USH1C-207ENST00000527720 DCAF5Q96JK2 942 aa18.68■□□□□ 0.58
USH1C-207ENST00000527720 GLRX3O76003 335 aaKnown RBP18.67■□□□□ 0.58
USH1C-207ENST00000527720 OS9Q13438 667 aaPredicted RBP18.67■□□□□ 0.58
USH1C-207ENST00000527720 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
USH1C-207ENST00000527720 GZF1Q9H116 711 aaPredicted RBP18.67■□□□□ 0.58
USH1C-207ENST00000527720 BAG4O95429 457 aaKnown RBP18.67■□□□□ 0.58
USH1C-207ENST00000527720 CSB-PGBD3P0DP91 1061 aa18.67■□□□□ 0.58
USH1C-207ENST00000527720 CWF19L2Q2TBE0 894 aaKnown RBP18.66■□□□□ 0.58
USH1C-207ENST00000527720 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
USH1C-207ENST00000527720 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
USH1C-207ENST00000527720 GPATCH3Q96I76 525 aa18.66■□□□□ 0.58
USH1C-207ENST00000527720 AFDNP55196 1824 aaKnown RBP18.66■□□□□ 0.58
USH1C-207ENST00000527720 SGSM2O43147 1006 aa18.65■□□□□ 0.58
USH1C-207ENST00000527720 HSPA4P34932 840 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms