RNA–Protein interactions for RNA: ENST00000527656.1

LRP4-202, Transcript of LDL receptor related protein 4, humanhuman

TSL 2

Gene LRP4, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-202ENST00000527656 RFC4P35249 363 aa20.75■□□□□ 0.91
LRP4-202ENST00000527656 VSIG10Q8N0Z9 540 aa20.75■□□□□ 0.91
LRP4-202ENST00000527656 FKBP8Q14318 412 aa20.74■□□□□ 0.91
LRP4-202ENST00000527656 RALBP1Q15311 655 aa20.74■□□□□ 0.91
LRP4-202ENST00000527656 GPR162Q16538 588 aa20.73■□□□□ 0.91
LRP4-202ENST00000527656 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
LRP4-202ENST00000527656 TTC5Q8N0Z6 440 aa20.73■□□□□ 0.91
LRP4-202ENST00000527656 DLEC1Q9Y238 1755 aa20.72■□□□□ 0.91
LRP4-202ENST00000527656 ARFGEF1Q9Y6D6 1849 aa20.72■□□□□ 0.91
LRP4-202ENST00000527656 DDR1Q08345 913 aa20.72■□□□□ 0.91
LRP4-202ENST00000527656 WWC3Q9ULE0 1092 aa20.72■□□□□ 0.91
LRP4-202ENST00000527656 ANKRD31Q8N7Z5 1873 aa20.72■□□□□ 0.91
LRP4-202ENST00000527656 PRAMEF22A3QJZ6 481 aa20.71■□□□□ 0.91
LRP4-202ENST00000527656 NLGN1Q8N2Q7 840 aa20.71■□□□□ 0.91
LRP4-202ENST00000527656 MYBBP1AQ9BQG0 1328 aaKnown RBP20.71■□□□□ 0.91
LRP4-202ENST00000527656 BTBD11A6QL63 1104 aa20.7■□□□□ 0.9
LRP4-202ENST00000527656 BCL2L12Q9HB09 334 aa20.7■□□□□ 0.9
LRP4-202ENST00000527656 USPL1Q5W0Q7 1092 aa20.69■□□□□ 0.9
LRP4-202ENST00000527656 CANXP27824 592 aaKnown RBP20.68■□□□□ 0.9
LRP4-202ENST00000527656 FMNL2Q96PY5 1086 aa20.68■□□□□ 0.9
LRP4-202ENST00000527656 THUMPD2Q9BTF0 503 aaKnown RBP20.68■□□□□ 0.9
LRP4-202ENST00000527656 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
LRP4-202ENST00000527656 HTATSF1O43719 755 aaKnown RBP20.67■□□□□ 0.9
LRP4-202ENST00000527656 EIF5P55010 431 aaKnown RBP20.67■□□□□ 0.9
LRP4-202ENST00000527656 RTF1Q92541 710 aaKnown RBP20.67■□□□□ 0.9
LRP4-202ENST00000527656 POLRMTO00411 1230 aaKnown RBP20.66■□□□□ 0.9
LRP4-202ENST00000527656 NFE2L2Q16236 605 aa20.66■□□□□ 0.9
LRP4-202ENST00000527656 NARFQ9UHQ1 456 aa20.66■□□□□ 0.9
LRP4-202ENST00000527656 A1BGP04217 495 aa20.65■□□□□ 0.9
LRP4-202ENST00000527656 TM4SF1P30408 202 aa20.65■□□□□ 0.9
LRP4-202ENST00000527656 PIP4K2AP48426 406 aaPredicted RBP20.65■□□□□ 0.9
LRP4-202ENST00000527656 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
LRP4-202ENST00000527656 MIS18AQ9NYP9 233 aa20.65■□□□□ 0.9
LRP4-202ENST00000527656 STARD3NLO95772 234 aa20.64■□□□□ 0.89
LRP4-202ENST00000527656 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
LRP4-202ENST00000527656 PARP3Q9Y6F1 533 aa20.64■□□□□ 0.89
LRP4-202ENST00000527656 CACNA1SQ13698 1873 aa20.64■□□□□ 0.89
LRP4-202ENST00000527656 CARMIL3Q8ND23 1372 aa20.63■□□□□ 0.89
LRP4-202ENST00000527656 NFIXQ14938 502 aa20.63■□□□□ 0.89
LRP4-202ENST00000527656 ZNF784Q8NCA9 323 aaPredicted RBP20.63■□□□□ 0.89
LRP4-202ENST00000527656 ZPR1O75312 459 aa20.62■□□□□ 0.89
LRP4-202ENST00000527656 NUP98P52948 1817 aa20.62■□□□□ 0.89
LRP4-202ENST00000527656 MAPK8IP3Q9UPT6 1336 aa20.61■□□□□ 0.89
LRP4-202ENST00000527656 A0A0G2JLW4 131 aa20.61■□□□□ 0.89
LRP4-202ENST00000527656 DPEP1P16444 411 aa20.61■□□□□ 0.89
LRP4-202ENST00000527656 KCNA3P22001 575 aa20.61■□□□□ 0.89
LRP4-202ENST00000527656 SBF1O95248 1867 aa20.6■□□□□ 0.89
LRP4-202ENST00000527656 IL6STP40189 918 aaPredicted RBP20.6■□□□□ 0.89
LRP4-202ENST00000527656 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
LRP4-202ENST00000527656 CCDC146Q8IYE0 955 aa20.6■□□□□ 0.89
LRP4-202ENST00000527656 TEX13AQ9BXU3 409 aaPredicted RBP20.6■□□□□ 0.89
LRP4-202ENST00000527656 NBPF26B4DH59 902 aa20.59■□□□□ 0.89
LRP4-202ENST00000527656 GRIN3BO60391 1043 aa20.59■□□□□ 0.89
LRP4-202ENST00000527656 TGFB2P61812 414 aa20.59■□□□□ 0.89
LRP4-202ENST00000527656 NBPF10Q6P3W6 841 aaKnown RBP20.59■□□□□ 0.89
LRP4-202ENST00000527656 NBPF15Q8N660 670 aa20.59■□□□□ 0.89
LRP4-202ENST00000527656 TBC1D2BQ9UPU7 963 aa20.59■□□□□ 0.89
LRP4-202ENST00000527656 ZNF330Q9Y3S2 320 aaPredicted RBP20.59■□□□□ 0.89
LRP4-202ENST00000527656 ADCY9O60503 1353 aa20.59■□□□□ 0.89
LRP4-202ENST00000527656 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
LRP4-202ENST00000527656 CAMTA2O94983 1202 aa20.57■□□□□ 0.88
LRP4-202ENST00000527656 NEFMP07197 916 aa20.57■□□□□ 0.88
LRP4-202ENST00000527656 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
LRP4-202ENST00000527656 TBC1D9BQ66K14 1250 aa20.57■□□□□ 0.88
LRP4-202ENST00000527656 RRP7AQ9Y3A4 280 aaKnown RBP20.57■□□□□ 0.88
LRP4-202ENST00000527656 CCDC88AQ3V6T2 1871 aa20.56■□□□□ 0.88
LRP4-202ENST00000527656 CHRNA5P30532 468 aa20.56■□□□□ 0.88
LRP4-202ENST00000527656 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
LRP4-202ENST00000527656 ARFGEF2Q9Y6D5 1785 aa20.56■□□□□ 0.88
LRP4-202ENST00000527656 RIPK4P57078 832 aa20.55■□□□□ 0.88
LRP4-202ENST00000527656 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
LRP4-202ENST00000527656 BICDL1Q6ZP65 573 aa20.55■□□□□ 0.88
LRP4-202ENST00000527656 ADAMTS8Q9UP79 889 aa20.55■□□□□ 0.88
LRP4-202ENST00000527656 A0A087WZG4 1122 aa20.54■□□□□ 0.88
LRP4-202ENST00000527656 SERPINB2P05120 415 aa20.54■□□□□ 0.88
LRP4-202ENST00000527656 PNNQ9H307 717 aaKnown RBP20.54■□□□□ 0.88
LRP4-202ENST00000527656 GIGYF1O75420 1035 aaPredicted RBP20.53■□□□□ 0.88
LRP4-202ENST00000527656 CCDC184Q52MB2 194 aa20.53■□□□□ 0.88
LRP4-202ENST00000527656 BCS1LQ9Y276 419 aa20.53■□□□□ 0.88
LRP4-202ENST00000527656 TNRC6CQ9HCJ0 1690 aaKnown RBP20.53■□□□□ 0.88
LRP4-202ENST00000527656 ATP10DQ9P241 1426 aa20.53■□□□□ 0.88
LRP4-202ENST00000527656 DZIP3Q86Y13 1208 aaKnown RBP20.52■□□□□ 0.88
LRP4-202ENST00000527656 TRIM35Q9UPQ4 493 aa20.52■□□□□ 0.88
LRP4-202ENST00000527656 ANKRD36CQ5JPF3 1778 aa20.51■□□□□ 0.87
LRP4-202ENST00000527656 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
LRP4-202ENST00000527656 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
LRP4-202ENST00000527656 NEUROD2Q15784 382 aa20.5■□□□□ 0.87
LRP4-202ENST00000527656 CCDC24Q8N4L8 307 aa20.5■□□□□ 0.87
LRP4-202ENST00000527656 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
LRP4-202ENST00000527656 SLX4Q8IY92 1834 aa20.5■□□□□ 0.87
LRP4-202ENST00000527656 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
LRP4-202ENST00000527656 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
LRP4-202ENST00000527656 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
LRP4-202ENST00000527656 TIAM2Q8IVF5 1701 aa20.47■□□□□ 0.87
LRP4-202ENST00000527656 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
LRP4-202ENST00000527656 HLFQ16534 295 aa20.46■□□□□ 0.87
LRP4-202ENST00000527656 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
LRP4-202ENST00000527656 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
LRP4-202ENST00000527656 LRP10Q7Z4F1 713 aa20.45■□□□□ 0.86
LRP4-202ENST00000527656 DICER1Q9UPY3 1922 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms