RNA–Protein interactions for RNA: ENST00000527440.1

AP001547.1-201, humanhuman

TSL 3 BASIC

Gene AP001547.1, Length 374 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001547.1-201ENST00000527440 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
AP001547.1-201ENST00000527440 DDX10Q13206 875 aaKnown RBP19.05■□□□□ 0.64
AP001547.1-201ENST00000527440 NPM2Q86SE8 214 aaKnown RBP19.05■□□□□ 0.64
AP001547.1-201ENST00000527440 C10orf71Q711Q0 1435 aa19.05■□□□□ 0.64
AP001547.1-201ENST00000527440 C4AP0C0L4 1744 aa19.05■□□□□ 0.64
AP001547.1-201ENST00000527440 DCTN1Q14203 1278 aa19.04■□□□□ 0.64
AP001547.1-201ENST00000527440 NARFQ9UHQ1 456 aa19.04■□□□□ 0.64
AP001547.1-201ENST00000527440 BCS1LQ9Y276 419 aa19.04■□□□□ 0.64
AP001547.1-201ENST00000527440 PXDNLA1KZ92 1463 aa19.03■□□□□ 0.64
AP001547.1-201ENST00000527440 DPEP1P16444 411 aa19.03■□□□□ 0.64
AP001547.1-201ENST00000527440 DDR1Q08345 913 aa19.03■□□□□ 0.64
AP001547.1-201ENST00000527440 CHD4Q14839 1912 aa19.03■□□□□ 0.64
AP001547.1-201ENST00000527440 A0A087WZG4 1122 aa19.02■□□□□ 0.64
AP001547.1-201ENST00000527440 KCNQ3O43525 872 aa19.02■□□□□ 0.64
AP001547.1-201ENST00000527440 MAPK8IP3Q9UPT6 1336 aa19.01■□□□□ 0.63
AP001547.1-201ENST00000527440 HTATSF1O43719 755 aaKnown RBP19.01■□□□□ 0.63
AP001547.1-201ENST00000527440 RALBP1Q15311 655 aa19.01■□□□□ 0.63
AP001547.1-201ENST00000527440 PNNQ9H307 717 aaKnown RBP19.01■□□□□ 0.63
AP001547.1-201ENST00000527440 VIRMAQ69YN4 1812 aaKnown RBP19.01■□□□□ 0.63
AP001547.1-201ENST00000527440 POLRMTO00411 1230 aaKnown RBP19■□□□□ 0.63
AP001547.1-201ENST00000527440 TM4SF1P30408 202 aa19■□□□□ 0.63
AP001547.1-201ENST00000527440 BICDL1Q6ZP65 573 aa19■□□□□ 0.63
AP001547.1-201ENST00000527440 UBR2Q8IWV8 1755 aa18.99■□□□□ 0.63
AP001547.1-201ENST00000527440 A1BGP04217 495 aa18.99■□□□□ 0.63
AP001547.1-201ENST00000527440 EIF5P55010 431 aaKnown RBP18.99■□□□□ 0.63
AP001547.1-201ENST00000527440 NFIXQ14938 502 aa18.99■□□□□ 0.63
AP001547.1-201ENST00000527440 TBC1D2BQ9UPU7 963 aa18.98■□□□□ 0.63
AP001547.1-201ENST00000527440 GIGYF1O75420 1035 aaPredicted RBP18.97■□□□□ 0.63
AP001547.1-201ENST00000527440 IL6STP40189 918 aaPredicted RBP18.97■□□□□ 0.63
AP001547.1-201ENST00000527440 TAF7Q15545 349 aaPredicted RBP18.97■□□□□ 0.63
AP001547.1-201ENST00000527440 ARHGAP27Q6ZUM4 889 aa18.97■□□□□ 0.63
AP001547.1-201ENST00000527440 ZNF526Q8TF50 670 aaPredicted RBP18.97■□□□□ 0.63
AP001547.1-201ENST00000527440 PIM2Q9P1W9 311 aa18.97■□□□□ 0.63
AP001547.1-201ENST00000527440 SERPINB2P05120 415 aa18.96■□□□□ 0.63
AP001547.1-201ENST00000527440 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
AP001547.1-201ENST00000527440 CHRNA5P30532 468 aa18.96■□□□□ 0.63
AP001547.1-201ENST00000527440 NFE2L2Q16236 605 aa18.96■□□□□ 0.63
AP001547.1-201ENST00000527440 BCL2L12Q9HB09 334 aa18.96■□□□□ 0.63
AP001547.1-201ENST00000527440 MIS18AQ9NYP9 233 aa18.96■□□□□ 0.63
AP001547.1-201ENST00000527440 ATP10DQ9P241 1426 aa18.96■□□□□ 0.63
AP001547.1-201ENST00000527440 PRAMEF22A3QJZ6 481 aa18.95■□□□□ 0.62
AP001547.1-201ENST00000527440 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
AP001547.1-201ENST00000527440 DALRD3Q5D0E6 543 aaKnown RBP18.95■□□□□ 0.62
AP001547.1-201ENST00000527440 PLEKHF1Q96S99 279 aa18.95■□□□□ 0.62
AP001547.1-201ENST00000527440 USP16Q9Y5T5 823 aa18.95■□□□□ 0.62
AP001547.1-201ENST00000527440 SIPA1L3O60292 1781 aaPredicted RBP18.95■□□□□ 0.62
AP001547.1-201ENST00000527440 N4BP2Q86UW6 1770 aaPredicted RBP18.94■□□□□ 0.62
AP001547.1-201ENST00000527440 NPHP1O15259 732 aa18.94■□□□□ 0.62
AP001547.1-201ENST00000527440 KCNA3P22001 575 aa18.94■□□□□ 0.62
AP001547.1-201ENST00000527440 MYBBP1AQ9BQG0 1328 aaKnown RBP18.94■□□□□ 0.62
AP001547.1-201ENST00000527440 KIF13BQ9NQT8 1826 aa18.93■□□□□ 0.62
AP001547.1-201ENST00000527440 TBC1D9BQ66K14 1250 aa18.93■□□□□ 0.62
AP001547.1-201ENST00000527440 DZIP3Q86Y13 1208 aaKnown RBP18.93■□□□□ 0.62
AP001547.1-201ENST00000527440 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
AP001547.1-201ENST00000527440 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
AP001547.1-201ENST00000527440 GPBP1L1Q9HC44 474 aaPredicted RBP18.93■□□□□ 0.62
AP001547.1-201ENST00000527440 C1QTNF8P60827 252 aa18.92■□□□□ 0.62
AP001547.1-201ENST00000527440 KIAA1551Q9HCM1 1747 aa18.91■□□□□ 0.62
AP001547.1-201ENST00000527440 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
AP001547.1-201ENST00000527440 SETDB2Q96T68 719 aa18.9■□□□□ 0.62
AP001547.1-201ENST00000527440 H0YIN7 160 aa18.89■□□□□ 0.61
AP001547.1-201ENST00000527440 CAMTA2O94983 1202 aa18.89■□□□□ 0.61
AP001547.1-201ENST00000527440 RIPK4P57078 832 aa18.89■□□□□ 0.61
AP001547.1-201ENST00000527440 C2CD5Q86YS7 1000 aa18.89■□□□□ 0.61
AP001547.1-201ENST00000527440 ADCY9O60503 1353 aa18.89■□□□□ 0.61
AP001547.1-201ENST00000527440 CARMIL3Q8ND23 1372 aa18.89■□□□□ 0.61
AP001547.1-201ENST00000527440 CCDC24Q8N4L8 307 aa18.88■□□□□ 0.61
AP001547.1-201ENST00000527440 ZNF652Q9Y2D9 606 aa18.88■□□□□ 0.61
AP001547.1-201ENST00000527440 SENP3-EIF4A1A0A087X0R7 540 aa18.87■□□□□ 0.61
AP001547.1-201ENST00000527440 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
AP001547.1-201ENST00000527440 CNBD1Q8NA66 436 aa18.87■□□□□ 0.61
AP001547.1-201ENST00000527440 LMOD3Q0VAK6 560 aa18.86■□□□□ 0.61
AP001547.1-201ENST00000527440 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
AP001547.1-201ENST00000527440 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
AP001547.1-201ENST00000527440 TSPYL4Q9UJ04 414 aa18.86■□□□□ 0.61
AP001547.1-201ENST00000527440 NBPF26B4DH59 902 aa18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 PDE6BP35913 854 aa18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 ST5P78524 1137 aa18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 C9orf131Q5VYM1 1079 aa18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 PRR5LQ6MZQ0 368 aa18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 NBPF10Q6P3W6 841 aaKnown RBP18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 NBPF15Q8N660 670 aa18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 TTLL6Q8N841 843 aa18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 RRP7AQ9Y3A4 280 aaKnown RBP18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
AP001547.1-201ENST00000527440 TMPOP42166 694 aaKnown RBP18.84■□□□□ 0.61
AP001547.1-201ENST00000527440 EIF4A1P60842 406 aaKnown RBP18.84■□□□□ 0.61
AP001547.1-201ENST00000527440 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
AP001547.1-201ENST00000527440 BRIP1Q9BX63 1249 aa18.84■□□□□ 0.61
AP001547.1-201ENST00000527440 CLEC4GQ6UXB4 293 aa18.83■□□□□ 0.6
AP001547.1-201ENST00000527440 RNF181Q9P0P0 153 aa18.83■□□□□ 0.6
AP001547.1-201ENST00000527440 FAM177BA6PVY3 158 aa18.82■□□□□ 0.6
AP001547.1-201ENST00000527440 MYL6BP14649 208 aa18.82■□□□□ 0.6
AP001547.1-201ENST00000527440 ZEB1P37275 1124 aaPredicted RBP18.82■□□□□ 0.6
AP001547.1-201ENST00000527440 PRKRIP1Q9H875 184 aaPredicted RBP18.82■□□□□ 0.6
AP001547.1-201ENST00000527440 PDZRN3Q9UPQ7 1066 aa18.82■□□□□ 0.6
AP001547.1-201ENST00000527440 NIP7Q9Y221 180 aaKnown RBP eCLIP18.82■□□□□ 0.6
AP001547.1-201ENST00000527440 AFDNP55196 1824 aaKnown RBP18.81■□□□□ 0.6
AP001547.1-201ENST00000527440 NRXN2Q9P2S2 1712 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms