RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 KDM3BQ7LBC6 1761 aa24.64■■□□□ 1.53
UBXN1-208ENST00000527421 COL15A1P39059 1388 aa24.64■■□□□ 1.53
UBXN1-208ENST00000527421 TAF7Q15545 349 aaPredicted RBP24.63■■□□□ 1.53
UBXN1-208ENST00000527421 NLGN2Q8NFZ4 835 aa24.63■■□□□ 1.53
UBXN1-208ENST00000527421 CD2APQ9Y5K6 639 aa24.63■■□□□ 1.53
UBXN1-208ENST00000527421 SRP68Q9UHB9 627 aaKnown RBP24.62■■□□□ 1.53
UBXN1-208ENST00000527421 CANXP27824 592 aaKnown RBP24.61■■□□□ 1.53
UBXN1-208ENST00000527421 CCDC146Q8IYE0 955 aa24.61■■□□□ 1.53
UBXN1-208ENST00000527421 THUMPD2Q9BTF0 503 aaKnown RBP24.61■■□□□ 1.53
UBXN1-208ENST00000527421 RIPK4P57078 832 aa24.6■■□□□ 1.53
UBXN1-208ENST00000527421 PNISRQ8TF01 805 aaKnown RBP24.6■■□□□ 1.53
UBXN1-208ENST00000527421 ZPR1O75312 459 aa24.59■■□□□ 1.53
UBXN1-208ENST00000527421 TMPOP42166 694 aaKnown RBP24.59■■□□□ 1.53
UBXN1-208ENST00000527421 LMOD3Q0VAK6 560 aa24.59■■□□□ 1.53
UBXN1-208ENST00000527421 RUNDC1Q96C34 613 aa24.59■■□□□ 1.53
UBXN1-208ENST00000527421 ADAMTS8Q9UP79 889 aa24.59■■□□□ 1.53
UBXN1-208ENST00000527421 LAMB4A4D0S4 1761 aa24.59■■□□□ 1.53
UBXN1-208ENST00000527421 SNRPA1P09661 255 aaKnown RBP24.58■■□□□ 1.53
UBXN1-208ENST00000527421 CHD4Q14839 1912 aa24.58■■□□□ 1.53
UBXN1-208ENST00000527421 KIF13BQ9NQT8 1826 aa24.57■■□□□ 1.52
UBXN1-208ENST00000527421 FKBP8Q14318 412 aa24.57■■□□□ 1.52
UBXN1-208ENST00000527421 MIS18AQ9NYP9 233 aa24.57■■□□□ 1.52
UBXN1-208ENST00000527421 NARFQ9UHQ1 456 aa24.57■■□□□ 1.52
UBXN1-208ENST00000527421 EIF5P55010 431 aaKnown RBP24.56■■□□□ 1.52
UBXN1-208ENST00000527421 GPR162Q16538 588 aa24.56■■□□□ 1.52
UBXN1-208ENST00000527421 USPL1Q5W0Q7 1092 aa24.56■■□□□ 1.52
UBXN1-208ENST00000527421 PARP3Q9Y6F1 533 aa24.56■■□□□ 1.52
UBXN1-208ENST00000527421 SCN7AQ01118 1682 aa24.56■■□□□ 1.52
UBXN1-208ENST00000527421 A0A087WZG4 1122 aa24.55■■□□□ 1.52
UBXN1-208ENST00000527421 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
UBXN1-208ENST00000527421 ZNF784Q8NCA9 323 aaPredicted RBP24.55■■□□□ 1.52
UBXN1-208ENST00000527421 RRP7AQ9Y3A4 280 aaKnown RBP24.55■■□□□ 1.52
UBXN1-208ENST00000527421 ZNF330Q9Y3S2 320 aaPredicted RBP24.55■■□□□ 1.52
UBXN1-208ENST00000527421 C10orf71Q711Q0 1435 aa24.54■■□□□ 1.52
UBXN1-208ENST00000527421 PRAMEF22A3QJZ6 481 aa24.54■■□□□ 1.52
UBXN1-208ENST00000527421 A1BGP04217 495 aa24.54■■□□□ 1.52
UBXN1-208ENST00000527421 IL6STP40189 918 aaPredicted RBP24.54■■□□□ 1.52
UBXN1-208ENST00000527421 USP16Q9Y5T5 823 aa24.54■■□□□ 1.52
UBXN1-208ENST00000527421 ANP32CO43423 234 aa24.53■■□□□ 1.52
UBXN1-208ENST00000527421 NEUROD2Q15784 382 aa24.53■■□□□ 1.52
UBXN1-208ENST00000527421 NPM2Q86SE8 214 aaKnown RBP24.53■■□□□ 1.52
UBXN1-208ENST00000527421 DDR1Q08345 913 aa24.51■■□□□ 1.51
UBXN1-208ENST00000527421 KIAA1551Q9HCM1 1747 aa24.5■■□□□ 1.51
UBXN1-208ENST00000527421 BCORQ6W2J9 1755 aa24.5■■□□□ 1.51
UBXN1-208ENST00000527421 TSPYL4Q9UJ04 414 aa24.5■■□□□ 1.51
UBXN1-208ENST00000527421 EIF4A1P60842 406 aaKnown RBP24.49■■□□□ 1.51
UBXN1-208ENST00000527421 BCL2L12Q9HB09 334 aa24.49■■□□□ 1.51
UBXN1-208ENST00000527421 PXDNLA1KZ92 1463 aa24.49■■□□□ 1.51
UBXN1-208ENST00000527421 POLRMTO00411 1230 aaKnown RBP24.48■■□□□ 1.51
UBXN1-208ENST00000527421 TM4SF1P30408 202 aa24.48■■□□□ 1.51
UBXN1-208ENST00000527421 N4BP2Q86UW6 1770 aaPredicted RBP24.48■■□□□ 1.51
UBXN1-208ENST00000527421 UTRNP46939 3433 aa24.48■■□□□ 1.51
UBXN1-208ENST00000527421 AFDNP55196 1824 aaKnown RBP24.47■■□□□ 1.51
UBXN1-208ENST00000527421 GIGYF1O75420 1035 aaPredicted RBP24.47■■□□□ 1.51
UBXN1-208ENST00000527421 YBX3P16989 372 aaKnown RBP eCLIP24.47■■□□□ 1.51
UBXN1-208ENST00000527421 PIP4K2AP48426 406 aaPredicted RBP24.47■■□□□ 1.51
UBXN1-208ENST00000527421 NFIXQ14938 502 aa24.47■■□□□ 1.51
UBXN1-208ENST00000527421 CCDC184Q52MB2 194 aa24.47■■□□□ 1.51
UBXN1-208ENST00000527421 BABAM1Q9NWV8 329 aa24.47■■□□□ 1.51
UBXN1-208ENST00000527421 TBC1D2BQ9UPU7 963 aa24.47■■□□□ 1.51
UBXN1-208ENST00000527421 TRIM35Q9UPQ4 493 aa24.46■■□□□ 1.51
UBXN1-208ENST00000527421 NRXN2Q9P2S2 1712 aa24.46■■□□□ 1.51
UBXN1-208ENST00000527421 TGFB2P61812 414 aa24.45■■□□□ 1.5
UBXN1-208ENST00000527421 GRIN3BO60391 1043 aa24.44■■□□□ 1.5
UBXN1-208ENST00000527421 DZIP3Q86Y13 1208 aaKnown RBP24.44■■□□□ 1.5
UBXN1-208ENST00000527421 NBPF26B4DH59 902 aa24.43■■□□□ 1.5
UBXN1-208ENST00000527421 APAF1O14727 1248 aa24.43■■□□□ 1.5
UBXN1-208ENST00000527421 NBPF10Q6P3W6 841 aaKnown RBP24.43■■□□□ 1.5
UBXN1-208ENST00000527421 NBPF15Q8N660 670 aa24.43■■□□□ 1.5
UBXN1-208ENST00000527421 MRS2Q9HD23 443 aa24.43■■□□□ 1.5
UBXN1-208ENST00000527421 CAMTA2O94983 1202 aa24.42■■□□□ 1.5
UBXN1-208ENST00000527421 BICDL1Q6ZP65 573 aa24.42■■□□□ 1.5
UBXN1-208ENST00000527421 WWC3Q9ULE0 1092 aa24.42■■□□□ 1.5
UBXN1-208ENST00000527421 BRCA1P38398 1863 aaKnown RBP24.42■■□□□ 1.5
UBXN1-208ENST00000527421 SERPINB2P05120 415 aa24.4■■□□□ 1.5
UBXN1-208ENST00000527421 TBC1D9BQ66K14 1250 aa24.4■■□□□ 1.5
UBXN1-208ENST00000527421 LAS1LQ9Y4W2 734 aaKnown RBP24.4■■□□□ 1.5
UBXN1-208ENST00000527421 CARMIL3Q8ND23 1372 aa24.4■■□□□ 1.5
UBXN1-208ENST00000527421 A0A0G2JLW4 131 aa24.39■■□□□ 1.49
UBXN1-208ENST00000527421 DPEP1P16444 411 aa24.39■■□□□ 1.49
UBXN1-208ENST00000527421 ZNF652Q9Y2D9 606 aa24.39■■□□□ 1.49
UBXN1-208ENST00000527421 GOLGB1Q14789 3259 aaKnown RBP24.38■■□□□ 1.49
UBXN1-208ENST00000527421 SENP3-EIF4A1A0A087X0R7 540 aa24.38■■□□□ 1.49
UBXN1-208ENST00000527421 CHL1O00533 1208 aa24.38■■□□□ 1.49
UBXN1-208ENST00000527421 ERBB4Q15303 1308 aa24.37■■□□□ 1.49
UBXN1-208ENST00000527421 C1QTNF8P60827 252 aa24.37■■□□□ 1.49
UBXN1-208ENST00000527421 RGL2O15211 777 aa24.35■■□□□ 1.49
UBXN1-208ENST00000527421 CALD1Q05682 793 aaKnown RBP24.35■■□□□ 1.49
UBXN1-208ENST00000527421 CLEC4GQ6UXB4 293 aa24.35■■□□□ 1.49
UBXN1-208ENST00000527421 CFAP44Q96MT7 982 aa24.35■■□□□ 1.49
UBXN1-208ENST00000527421 SETDB2Q96T68 719 aa24.35■■□□□ 1.49
UBXN1-208ENST00000527421 DLEC1Q9Y238 1755 aa24.34■■□□□ 1.49
UBXN1-208ENST00000527421 BCS1LQ9Y276 419 aa24.34■■□□□ 1.49
UBXN1-208ENST00000527421 ARFGEF1Q9Y6D6 1849 aa24.33■■□□□ 1.49
UBXN1-208ENST00000527421 MYL6BP14649 208 aa24.33■■□□□ 1.49
UBXN1-208ENST00000527421 EIF2S2P20042 333 aaKnown RBP24.33■■□□□ 1.49
UBXN1-208ENST00000527421 NGEFQ8N5V2 710 aa24.33■■□□□ 1.49
UBXN1-208ENST00000527421 ANKRD31Q8N7Z5 1873 aa24.32■■□□□ 1.48
UBXN1-208ENST00000527421 CHRNA5P30532 468 aa24.32■■□□□ 1.48
UBXN1-208ENST00000527421 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms