RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PDE1AP54750 535 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 FAM13BQ9NYF5 915 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 NSFL1CQ9UNZ2 370 aaKnown RBP15.2■□□□□ 0.02
CAPN1-208ENST00000527323 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 ADAMTS2O95450 1211 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 PTMAP06454 111 aaKnown RBP15.2■□□□□ 0.02
CAPN1-208ENST00000527323 RILPL2Q969X0 211 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 PKNOX2Q96KN3 472 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 PTPRCP08575 1304 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 TOPAZ1Q8N9V7 1692 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 MCCP23508 829 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 ANKRD24Q8TF21 1146 aa15.2■□□□□ 0.02
CAPN1-208ENST00000527323 KAT6BQ8WYB5 2073 aa15.19■□□□□ 0.02
CAPN1-208ENST00000527323 ANKARQ7Z5J8 1434 aa15.19■□□□□ 0.02
CAPN1-208ENST00000527323 ATP10DQ9P241 1426 aa15.19■□□□□ 0.02
CAPN1-208ENST00000527323 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
CAPN1-208ENST00000527323 MBD3O95983 291 aa15.18■□□□□ 0.02
CAPN1-208ENST00000527323 PDLIM2Q96JY6 352 aa15.18■□□□□ 0.02
CAPN1-208ENST00000527323 FLT4P35916 1363 aa15.18■□□□□ 0.02
CAPN1-208ENST00000527323 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
CAPN1-208ENST00000527323 AATKQ6ZMQ8 1374 aa15.18■□□□□ 0.02
CAPN1-208ENST00000527323 CDK12Q9NYV4 1490 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-208ENST00000527323 G2E3Q7L622 706 aa15.17■□□□□ 0.02
CAPN1-208ENST00000527323 ZKSCAN5Q9Y2L8 839 aa15.17■□□□□ 0.02
CAPN1-208ENST00000527323 NPHP3Q7Z494 1330 aa15.17■□□□□ 0.02
CAPN1-208ENST00000527323 A0A0G2JS52 829 aa15.17■□□□□ 0.02
CAPN1-208ENST00000527323 MCM2P49736 904 aa15.17■□□□□ 0.02
CAPN1-208ENST00000527323 RTF1Q92541 710 aaKnown RBP15.17■□□□□ 0.02
CAPN1-208ENST00000527323 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
CAPN1-208ENST00000527323 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
CAPN1-208ENST00000527323 CCDC39Q9UFE4 941 aa15.17■□□□□ 0.02
CAPN1-208ENST00000527323 ZNF500O60304 480 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-208ENST00000527323 ARHGEF25Q86VW2 580 aa15.16■□□□□ 0.02
CAPN1-208ENST00000527323 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
CAPN1-208ENST00000527323 USP31Q70CQ4 1352 aa15.16■□□□□ 0.02
CAPN1-208ENST00000527323 GNAI2P04899 355 aa15.16■□□□□ 0.02
CAPN1-208ENST00000527323 EP400Q96L91 3159 aa15.16■□□□□ 0.02
CAPN1-208ENST00000527323 SBNO1A3KN83 1393 aa15.16■□□□□ 0.02
CAPN1-208ENST00000527323 KIAA0232Q92628 1395 aa15.16■□□□□ 0.02
CAPN1-208ENST00000527323 IP6K1Q92551 441 aa15.15■□□□□ 0.02
CAPN1-208ENST00000527323 ESYT1Q9BSJ8 1104 aa15.15■□□□□ 0.02
CAPN1-208ENST00000527323 CCT4P50991 539 aaKnown RBP15.15■□□□□ 0.02
CAPN1-208ENST00000527323 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.15■□□□□ 0.02
CAPN1-208ENST00000527323 UQCRHLA0A096LP55 91 aa15.15■□□□□ 0.02
CAPN1-208ENST00000527323 UQCRHP07919 91 aa15.15■□□□□ 0.02
CAPN1-208ENST00000527323 CSPP1Q1MSJ5 1256 aa15.15■□□□□ 0.02
CAPN1-208ENST00000527323 SYAP1Q96A49 352 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-208ENST00000527323 UPF3BQ9BZI7 483 aaKnown RBP15.15■□□□□ 0.02
CAPN1-208ENST00000527323 LRRCC1Q9C099 1032 aa15.15■□□□□ 0.02
CAPN1-208ENST00000527323 TSPY26PQ9H489 355 aa15.15■□□□□ 0.02
CAPN1-208ENST00000527323 SRCAPQ6ZRS2 3230 aa15.15■□□□□ 0.02
CAPN1-208ENST00000527323 NRKQ7Z2Y5 1582 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 TERF1P54274 439 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 OSBPL3Q9H4L5 887 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 GDPD2Q9HCC8 539 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 PALD1Q9ULE6 856 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 BRD1O95696 1058 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 TMEM132AQ24JP5 1023 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 STK31Q9BXU1 1019 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 RGS12O14924 1447 aa15.14■□□□□ 0.01
CAPN1-208ENST00000527323 MX1P20591 662 aa15.13■□□□□ 0.01
CAPN1-208ENST00000527323 MPNDQ8N594 471 aa15.13■□□□□ 0.01
CAPN1-208ENST00000527323 KCNH5Q8NCM2 988 aa15.13■□□□□ 0.01
CAPN1-208ENST00000527323 ARID3AQ99856 593 aa15.13■□□□□ 0.01
CAPN1-208ENST00000527323 KCNQ3O43525 872 aa15.12■□□□□ 0.01
CAPN1-208ENST00000527323 MCM5P33992 734 aa15.12■□□□□ 0.01
CAPN1-208ENST00000527323 DNTTIP2Q5QJE6 756 aaKnown RBP15.12■□□□□ 0.01
CAPN1-208ENST00000527323 SPATA31A3Q5VYP0 1347 aa15.12■□□□□ 0.01
CAPN1-208ENST00000527323 UBAP1LF5GYI3 381 aa15.12■□□□□ 0.01
CAPN1-208ENST00000527323 FKBP5Q13451 457 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-208ENST00000527323 CHMLP26374 656 aa15.11■□□□□ 0.01
CAPN1-208ENST00000527323 CUL4AQ13619 759 aa15.11■□□□□ 0.01
CAPN1-208ENST00000527323 ZNF530Q6P9A1 599 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-208ENST00000527323 XIRP1Q702N8 1843 aaKnown RBP15.1■□□□□ 0.01
CAPN1-208ENST00000527323 TOM1L2Q6ZVM7 507 aa15.1■□□□□ 0.01
CAPN1-208ENST00000527323 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
CAPN1-208ENST00000527323 ANXA1P04083 346 aa15.1■□□□□ 0.01
CAPN1-208ENST00000527323 GNAI3P08754 354 aa15.1■□□□□ 0.01
CAPN1-208ENST00000527323 INTS4Q96HW7 963 aaKnown RBP15.1■□□□□ 0.01
CAPN1-208ENST00000527323 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
CAPN1-208ENST00000527323 GADD45BO75293 160 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-208ENST00000527323 PHF14O94880 888 aa15.09■□□□□ 0.01
CAPN1-208ENST00000527323 DDX54Q8TDD1 881 aaKnown RBP15.09■□□□□ 0.01
CAPN1-208ENST00000527323 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
CAPN1-208ENST00000527323 PIP4K2AP48426 406 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-208ENST00000527323 EVA1CP58658 441 aa15.09■□□□□ 0.01
CAPN1-208ENST00000527323 ANAPC15P60006 121 aa15.09■□□□□ 0.01
CAPN1-208ENST00000527323 USP48Q86UV5 1035 aa15.09■□□□□ 0.01
CAPN1-208ENST00000527323 NWD1Q149M9 1564 aa15.09■□□□□ 0.01
CAPN1-208ENST00000527323 RGPD2P0DJD1 1756 aa15.09■□□□□ 0.01
CAPN1-208ENST00000527323 LARP1Q6PKG0 1096 aaKnown RBP15.08■□□□□ 0.01
CAPN1-208ENST00000527323 MAP7D2Q96T17 732 aa15.08■□□□□ 0.01
CAPN1-208ENST00000527323 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0.01
CAPN1-208ENST00000527323 DLG5Q8TDM6 1919 aa15.08■□□□□ 0.01
CAPN1-208ENST00000527323 EIF2S2P20042 333 aaKnown RBP15.08■□□□□ 0
CAPN1-208ENST00000527323 ATP8B2P98198 1209 aa15.08■□□□□ 0
CAPN1-208ENST00000527323 SLC39A6Q13433 755 aa15.08■□□□□ 0
CAPN1-208ENST00000527323 MAP4K4O95819 1239 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms