RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
PTPMT1-204ENST00000527079 DBF4Q9UBU7 674 aaPredicted RBP13.16□□□□□ -0.3
PTPMT1-204ENST00000527079 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
PTPMT1-204ENST00000527079 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 RNMTO43148 476 aaKnown RBP13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 RHPN1Q8TCX5 695 aa13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 HDAC5Q9UQL6 1122 aa13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 ZGPATQ8N5A5 531 aaKnown RBP13.15□□□□□ -0.3
PTPMT1-204ENST00000527079 NPHP4O75161 1426 aaPredicted RBP13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 CUL4AQ13619 759 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 TMX3Q96JJ7 454 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 IL1RAPL2Q9NP60 686 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 ADCY9O60503 1353 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 MTX1Q13505 466 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 RBM33Q96EV2 1170 aaKnown RBP13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 LMBRD1Q9NUN5 540 aa13.14□□□□□ -0.31
PTPMT1-204ENST00000527079 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 KCNQ3O43525 872 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 ALDH1L1O75891 902 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 PI4K2BQ8TCG2 481 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 PKP1Q13835 747 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
PTPMT1-204ENST00000527079 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 ZNF445P59923 1031 aa13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 PXDNQ92626 1479 aa13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 MST1RQ04912 1400 aa13.12□□□□□ -0.31
PTPMT1-204ENST00000527079 CRYBG1Q9Y4K1 1723 aa13.11□□□□□ -0.31
PTPMT1-204ENST00000527079 HSPA4P34932 840 aa13.11□□□□□ -0.31
PTPMT1-204ENST00000527079 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
PTPMT1-204ENST00000527079 KSR2Q6VAB6 950 aa13.11□□□□□ -0.31
PTPMT1-204ENST00000527079 SGSM2O43147 1006 aa13.1□□□□□ -0.31
PTPMT1-204ENST00000527079 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
PTPMT1-204ENST00000527079 GLRX3O76003 335 aaKnown RBP13.1□□□□□ -0.31
PTPMT1-204ENST00000527079 ERC1Q8IUD2 1116 aa13.1□□□□□ -0.31
PTPMT1-204ENST00000527079 RAD50Q92878 1312 aa13.09□□□□□ -0.31
PTPMT1-204ENST00000527079 BRD1O95696 1058 aa13.09□□□□□ -0.31
PTPMT1-204ENST00000527079 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
PTPMT1-204ENST00000527079 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
PTPMT1-204ENST00000527079 ANXA1P04083 346 aa13.09□□□□□ -0.31
PTPMT1-204ENST00000527079 CLCN1P35523 988 aa13.09□□□□□ -0.31
PTPMT1-204ENST00000527079 OS9Q13438 667 aaPredicted RBP13.09□□□□□ -0.31
PTPMT1-204ENST00000527079 CLASRPQ8N2M8 674 aaKnown RBP13.09□□□□□ -0.31
PTPMT1-204ENST00000527079 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 CCDC173Q0VFZ6 552 aa13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 ANP32BQ92688 251 aaKnown RBP13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 NASPP49321 788 aaPredicted RBP13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 ZSCAN23Q3MJ62 389 aa13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 LINS1Q8NG48 757 aa13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 TRIM44Q96DX7 344 aaPredicted RBP13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 IL25Q9H293 177 aa13.08□□□□□ -0.32
PTPMT1-204ENST00000527079 UTYO14607 1347 aa13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 MBD3O95983 291 aa13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 NCLP19338 710 aaKnown RBP13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 KIAA1211Q6ZU35 1233 aa13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 LSG1Q9H089 658 aaKnown RBP13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 DDX21Q9NR30 783 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 AXIN2Q9Y2T1 843 aa13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 C1orf167Q5SNV9 1468 aa13.07□□□□□ -0.32
PTPMT1-204ENST00000527079 PPP1R9BQ96SB3 815 aa13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 ECHDC1Q9NTX5 307 aa13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 RGPD5Q99666 1765 aa13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 ERBB3P21860 1342 aa13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 PLEKHG2Q9H7P9 1386 aa13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 MAP4K4O95819 1239 aaPredicted RBP13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 PROSER3Q2NL68 480 aa13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
PTPMT1-204ENST00000527079 GPT2Q8TD30 523 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms