RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 AKAP4Q5JQC9 854 aa25.5■■□□□ 1.67
PKP3-204ENST00000526971 SLC52A2Q9HAB3 445 aa25.5■■□□□ 1.67
PKP3-204ENST00000526971 NRXN2Q9P2S2 1712 aa25.5■■□□□ 1.67
PKP3-204ENST00000526971 DLEC1Q9Y238 1755 aa25.49■■□□□ 1.67
PKP3-204ENST00000526971 SOS1Q07889 1333 aaPredicted RBP25.48■■□□□ 1.67
PKP3-204ENST00000526971 POLRMTO00411 1230 aaKnown RBP25.48■■□□□ 1.67
PKP3-204ENST00000526971 CHRNA5P30532 468 aa25.48■■□□□ 1.67
PKP3-204ENST00000526971 SLC39A6Q13433 755 aa25.48■■□□□ 1.67
PKP3-204ENST00000526971 MTHFSDQ2M296 383 aaKnown RBP25.48■■□□□ 1.67
PKP3-204ENST00000526971 U2AF1L5P0DN76 240 aaPredicted RBP25.47■■□□□ 1.67
PKP3-204ENST00000526971 U2AF1Q01081 240 aaKnown RBP eCLIP25.47■■□□□ 1.67
PKP3-204ENST00000526971 C9orf131Q5VYM1 1079 aa25.47■■□□□ 1.67
PKP3-204ENST00000526971 PIM2Q9P1W9 311 aa25.47■■□□□ 1.67
PKP3-204ENST00000526971 RNMTO43148 476 aaKnown RBP25.46■■□□□ 1.67
PKP3-204ENST00000526971 TM4SF1P30408 202 aa25.46■■□□□ 1.67
PKP3-204ENST00000526971 RSPH6AQ9H0K4 717 aa25.46■■□□□ 1.67
PKP3-204ENST00000526971 WDR90Q96KV7 1748 aa25.46■■□□□ 1.67
PKP3-204ENST00000526971 USPL1Q5W0Q7 1092 aa25.45■■□□□ 1.66
PKP3-204ENST00000526971 TOMM70O94826 608 aa25.44■■□□□ 1.66
PKP3-204ENST00000526971 CYP19A1P11511 503 aaPredicted RBP25.44■■□□□ 1.66
PKP3-204ENST00000526971 DALRD3Q5D0E6 543 aaKnown RBP25.44■■□□□ 1.66
PKP3-204ENST00000526971 COL15A1P39059 1388 aa25.44■■□□□ 1.66
PKP3-204ENST00000526971 PRKAR2BP31323 418 aa25.43■■□□□ 1.66
PKP3-204ENST00000526971 ZBTB1Q9Y2K1 713 aa25.43■■□□□ 1.66
PKP3-204ENST00000526971 MYBBP1AQ9BQG0 1328 aaKnown RBP25.42■■□□□ 1.66
PKP3-204ENST00000526971 SIPA1L3O60292 1781 aaPredicted RBP25.42■■□□□ 1.66
PKP3-204ENST00000526971 TNRC6CQ9HCJ0 1690 aaKnown RBP25.42■■□□□ 1.66
PKP3-204ENST00000526971 GAS2L2Q8NHY3 880 aa25.41■■□□□ 1.66
PKP3-204ENST00000526971 PHACTR3Q96KR7 559 aa25.41■■□□□ 1.66
PKP3-204ENST00000526971 CCDC88AQ3V6T2 1871 aa25.4■■□□□ 1.66
PKP3-204ENST00000526971 ZPR1O75312 459 aa25.4■■□□□ 1.66
PKP3-204ENST00000526971 APLP1P51693 650 aa25.4■■□□□ 1.66
PKP3-204ENST00000526971 NFIXQ14938 502 aa25.4■■□□□ 1.66
PKP3-204ENST00000526971 PRKRIP1Q9H875 184 aaPredicted RBP25.4■■□□□ 1.66
PKP3-204ENST00000526971 BCL2L12Q9HB09 334 aa25.4■■□□□ 1.66
PKP3-204ENST00000526971 RNF181Q9P0P0 153 aa25.39■■□□□ 1.66
PKP3-204ENST00000526971 NARFQ9UHQ1 456 aa25.39■■□□□ 1.66
PKP3-204ENST00000526971 ANKRD31Q8N7Z5 1873 aa25.38■■□□□ 1.65
PKP3-204ENST00000526971 DNAJC5GQ8N7S2 189 aa25.38■■□□□ 1.65
PKP3-204ENST00000526971 SCN7AQ01118 1682 aa25.37■■□□□ 1.65
PKP3-204ENST00000526971 CARMIL3Q8ND23 1372 aa25.37■■□□□ 1.65
PKP3-204ENST00000526971 RASSF7Q02833 373 aa25.36■■□□□ 1.65
PKP3-204ENST00000526971 TIAM2Q8IVF5 1701 aa25.36■■□□□ 1.65
PKP3-204ENST00000526971 GNAT3A8MTJ3 354 aa25.35■■□□□ 1.65
PKP3-204ENST00000526971 RBM46Q8TBY0 533 aaKnown RBP25.35■■□□□ 1.65
PKP3-204ENST00000526971 COL11A2P13942 1736 aaPredicted RBP25.34■■□□□ 1.65
PKP3-204ENST00000526971 PRELPP51888 382 aa25.33■■□□□ 1.65
PKP3-204ENST00000526971 VSIG10Q8N0Z9 540 aa25.33■■□□□ 1.65
PKP3-204ENST00000526971 SERPINB2P05120 415 aa25.32■■□□□ 1.64
PKP3-204ENST00000526971 CANXP27824 592 aaKnown RBP25.32■■□□□ 1.64
PKP3-204ENST00000526971 HTRA3P83110 453 aa25.32■■□□□ 1.64
PKP3-204ENST00000526971 IL17REQ8NFR9 667 aa25.31■■□□□ 1.64
PKP3-204ENST00000526971 KDM2BQ8NHM5 1336 aa25.31■■□□□ 1.64
PKP3-204ENST00000526971 RRAGCQ9HB90 399 aa25.3■■□□□ 1.64
PKP3-204ENST00000526971 EIF5P55010 431 aaKnown RBP25.29■■□□□ 1.64
PKP3-204ENST00000526971 C16orf71Q8IYS4 520 aaPredicted RBP25.29■■□□□ 1.64
PKP3-204ENST00000526971 PLEKHF1Q96S99 279 aa25.29■■□□□ 1.64
PKP3-204ENST00000526971 PNNQ9H307 717 aaKnown RBP25.29■■□□□ 1.64
PKP3-204ENST00000526971 NEFMP07197 916 aa25.28■■□□□ 1.64
PKP3-204ENST00000526971 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
PKP3-204ENST00000526971 CACNA1SQ13698 1873 aa25.28■■□□□ 1.64
PKP3-204ENST00000526971 BCORQ6W2J9 1755 aa25.27■■□□□ 1.64
PKP3-204ENST00000526971 BICDL1Q6ZP65 573 aa25.27■■□□□ 1.64
PKP3-204ENST00000526971 HEG1Q9ULI3 1381 aa25.27■■□□□ 1.64
PKP3-204ENST00000526971 FER1L6Q2WGJ9 1857 aa25.26■■□□□ 1.63
PKP3-204ENST00000526971 DICER1Q9UPY3 1922 aaKnown RBP25.26■■□□□ 1.63
PKP3-204ENST00000526971 FSTL1Q12841 308 aa25.26■■□□□ 1.63
PKP3-204ENST00000526971 C2CD5Q86YS7 1000 aa25.26■■□□□ 1.63
PKP3-204ENST00000526971 TEFQ10587 303 aa25.25■■□□□ 1.63
PKP3-204ENST00000526971 TTC5Q8N0Z6 440 aa25.25■■□□□ 1.63
PKP3-204ENST00000526971 CEMIPQ8WUJ3 1361 aa25.24■■□□□ 1.63
PKP3-204ENST00000526971 ZC3H4Q9UPT8 1303 aaKnown RBP25.24■■□□□ 1.63
PKP3-204ENST00000526971 NFKBIEO00221 500 aa25.24■■□□□ 1.63
PKP3-204ENST00000526971 HTATSF1O43719 755 aaKnown RBP25.24■■□□□ 1.63
PKP3-204ENST00000526971 TBC1D9BQ66K14 1250 aa25.24■■□□□ 1.63
PKP3-204ENST00000526971 ZNF790Q6PG37 636 aa25.24■■□□□ 1.63
PKP3-204ENST00000526971 TTLL6Q8N841 843 aa25.24■■□□□ 1.63
PKP3-204ENST00000526971 RTF1Q92541 710 aaKnown RBP25.24■■□□□ 1.63
PKP3-204ENST00000526971 STARD3NLO95772 234 aa25.23■■□□□ 1.63
PKP3-204ENST00000526971 LMNB1P20700 586 aa25.23■■□□□ 1.63
PKP3-204ENST00000526971 MAPK8IP3Q9UPT6 1336 aa25.22■■□□□ 1.63
PKP3-204ENST00000526971 PCNTO95613 3336 aa25.21■■□□□ 1.63
PKP3-204ENST00000526971 WDR43Q15061 677 aaKnown RBP eCLIP25.21■■□□□ 1.63
PKP3-204ENST00000526971 NFE2L2Q16236 605 aa25.21■■□□□ 1.63
PKP3-204ENST00000526971 CCDC24Q8N4L8 307 aa25.21■■□□□ 1.63
PKP3-204ENST00000526971 KLRG1Q96E93 195 aa25.21■■□□□ 1.63
PKP3-204ENST00000526971 TBC1D2BQ9UPU7 963 aa25.21■■□□□ 1.63
PKP3-204ENST00000526971 ARFGEF2Q9Y6D5 1785 aa25.21■■□□□ 1.63
PKP3-204ENST00000526971 A0A087WZG4 1122 aa25.2■■□□□ 1.62
PKP3-204ENST00000526971 H0YIN7 160 aa25.2■■□□□ 1.62
PKP3-204ENST00000526971 MCM10Q7L590 875 aa25.2■■□□□ 1.62
PKP3-204ENST00000526971 SLX4Q8IY92 1834 aa25.2■■□□□ 1.62
PKP3-204ENST00000526971 KCNQ3O43525 872 aa25.19■■□□□ 1.62
PKP3-204ENST00000526971 PRR5LQ6MZQ0 368 aa25.19■■□□□ 1.62
PKP3-204ENST00000526971 ZNF330Q9Y3S2 320 aaPredicted RBP25.19■■□□□ 1.62
PKP3-204ENST00000526971 GLTPD2A6NH11 291 aa25.18■■□□□ 1.62
PKP3-204ENST00000526971 ANP32CO43423 234 aa25.18■■□□□ 1.62
PKP3-204ENST00000526971 A1BGP04217 495 aa25.18■■□□□ 1.62
PKP3-204ENST00000526971 DCTN1Q14203 1278 aa25.18■■□□□ 1.62
PKP3-204ENST00000526971 ADAMTS8Q9UP79 889 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms