RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 COL15A1P39059 1388 aa25.43■■□□□ 1.66
CAPN1-206ENST00000526966 COL3A1P02461 1466 aaPredicted RBP25.42■■□□□ 1.66
CAPN1-206ENST00000526966 ZPR1O75312 459 aa25.42■■□□□ 1.66
CAPN1-206ENST00000526966 IFFO2Q5TF58 517 aa25.42■■□□□ 1.66
CAPN1-206ENST00000526966 C9orf131Q5VYM1 1079 aa25.42■■□□□ 1.66
CAPN1-206ENST00000526966 NMRK2Q9NPI5 230 aa25.42■■□□□ 1.66
CAPN1-206ENST00000526966 DIAPH1O60610 1272 aaKnown RBP25.41■■□□□ 1.66
CAPN1-206ENST00000526966 CHRNA5P30532 468 aa25.41■■□□□ 1.66
CAPN1-206ENST00000526966 VSIG10Q8N0Z9 540 aa25.41■■□□□ 1.66
CAPN1-206ENST00000526966 NARFQ9UHQ1 456 aa25.41■■□□□ 1.66
CAPN1-206ENST00000526966 SIPA1L3O60292 1781 aaPredicted RBP25.41■■□□□ 1.66
CAPN1-206ENST00000526966 ZBTB1Q9Y2K1 713 aa25.4■■□□□ 1.66
CAPN1-206ENST00000526966 TNRC6CQ9HCJ0 1690 aaKnown RBP25.39■■□□□ 1.65
CAPN1-206ENST00000526966 APLP1P51693 650 aa25.38■■□□□ 1.65
CAPN1-206ENST00000526966 NFIXQ14938 502 aa25.38■■□□□ 1.65
CAPN1-206ENST00000526966 NPC1L1Q9UHC9 1359 aa25.38■■□□□ 1.65
CAPN1-206ENST00000526966 CC2D1BQ5T0F9 858 aaKnown RBP25.37■■□□□ 1.65
CAPN1-206ENST00000526966 BCL2L12Q9HB09 334 aa25.37■■□□□ 1.65
CAPN1-206ENST00000526966 WDR90Q96KV7 1748 aa25.37■■□□□ 1.65
CAPN1-206ENST00000526966 RNF181Q9P0P0 153 aa25.35■■□□□ 1.65
CAPN1-206ENST00000526966 SCN7AQ01118 1682 aa25.35■■□□□ 1.65
CAPN1-206ENST00000526966 RBM46Q8TBY0 533 aaKnown RBP25.34■■□□□ 1.65
CAPN1-206ENST00000526966 ANKRD31Q8N7Z5 1873 aa25.32■■□□□ 1.64
CAPN1-206ENST00000526966 KDM2BQ8NHM5 1336 aa25.32■■□□□ 1.64
CAPN1-206ENST00000526966 CCDC88AQ3V6T2 1871 aa25.32■■□□□ 1.64
CAPN1-206ENST00000526966 SERPINB2P05120 415 aa25.31■■□□□ 1.64
CAPN1-206ENST00000526966 EIF5P55010 431 aaKnown RBP25.31■■□□□ 1.64
CAPN1-206ENST00000526966 DNAJC5GQ8N7S2 189 aa25.31■■□□□ 1.64
CAPN1-206ENST00000526966 TTC5Q8N0Z6 440 aa25.3■■□□□ 1.64
CAPN1-206ENST00000526966 ZC3H4Q9UPT8 1303 aaKnown RBP25.3■■□□□ 1.64
CAPN1-206ENST00000526966 CARMIL3Q8ND23 1372 aa25.3■■□□□ 1.64
CAPN1-206ENST00000526966 TIAM2Q8IVF5 1701 aa25.29■■□□□ 1.64
CAPN1-206ENST00000526966 CANXP27824 592 aaKnown RBP25.29■■□□□ 1.64
CAPN1-206ENST00000526966 IL17REQ8NFR9 667 aa25.29■■□□□ 1.64
CAPN1-206ENST00000526966 HEG1Q9ULI3 1381 aa25.29■■□□□ 1.64
CAPN1-206ENST00000526966 STARD3NLO95772 234 aa25.28■■□□□ 1.64
CAPN1-206ENST00000526966 C16orf71Q8IYS4 520 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-206ENST00000526966 GAS2L2Q8NHY3 880 aa25.28■■□□□ 1.64
CAPN1-206ENST00000526966 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-206ENST00000526966 GNAT3A8MTJ3 354 aa25.27■■□□□ 1.64
CAPN1-206ENST00000526966 RASSF7Q02833 373 aa25.27■■□□□ 1.64
CAPN1-206ENST00000526966 FSTL1Q12841 308 aa25.27■■□□□ 1.64
CAPN1-206ENST00000526966 ZNF790Q6PG37 636 aa25.27■■□□□ 1.64
CAPN1-206ENST00000526966 COL11A2P13942 1736 aaPredicted RBP25.26■■□□□ 1.63
CAPN1-206ENST00000526966 A0A087WZG4 1122 aa25.26■■□□□ 1.63
CAPN1-206ENST00000526966 U2SURPO15042 1029 aaKnown RBP25.26■■□□□ 1.63
CAPN1-206ENST00000526966 TEFQ10587 303 aa25.26■■□□□ 1.63
CAPN1-206ENST00000526966 CEMIPQ8WUJ3 1361 aa25.26■■□□□ 1.63
CAPN1-206ENST00000526966 TTLL6Q8N841 843 aa25.25■■□□□ 1.63
CAPN1-206ENST00000526966 BCORQ6W2J9 1755 aa25.25■■□□□ 1.63
CAPN1-206ENST00000526966 PRELPP51888 382 aa25.24■■□□□ 1.63
CAPN1-206ENST00000526966 C2CD5Q86YS7 1000 aa25.24■■□□□ 1.63
CAPN1-206ENST00000526966 TEX13AQ9BXU3 409 aaPredicted RBP25.24■■□□□ 1.63
CAPN1-206ENST00000526966 RRAGCQ9HB90 399 aa25.24■■□□□ 1.63
CAPN1-206ENST00000526966 LMNB1P20700 586 aa25.23■■□□□ 1.63
CAPN1-206ENST00000526966 DICER1Q9UPY3 1922 aaKnown RBP25.23■■□□□ 1.63
CAPN1-206ENST00000526966 FER1L6Q2WGJ9 1857 aa25.23■■□□□ 1.63
CAPN1-206ENST00000526966 TBC1D9BQ66K14 1250 aa25.22■■□□□ 1.63
CAPN1-206ENST00000526966 H0YIN7 160 aa25.21■■□□□ 1.63
CAPN1-206ENST00000526966 IL6STP40189 918 aaPredicted RBP25.21■■□□□ 1.63
CAPN1-206ENST00000526966 BICDL1Q6ZP65 573 aa25.21■■□□□ 1.63
CAPN1-206ENST00000526966 NFKBIEO00221 500 aa25.2■■□□□ 1.62
CAPN1-206ENST00000526966 FMNL2Q96PY5 1086 aa25.2■■□□□ 1.62
CAPN1-206ENST00000526966 ARFGEF2Q9Y6D5 1785 aa25.19■■□□□ 1.62
CAPN1-206ENST00000526966 PDZRN3Q9UPQ7 1066 aa25.19■■□□□ 1.62
CAPN1-206ENST00000526966 GLTPD2A6NH11 291 aa25.18■■□□□ 1.62
CAPN1-206ENST00000526966 CNGB1Q14028 1251 aaPredicted RBP25.18■■□□□ 1.62
CAPN1-206ENST00000526966 PRR5LQ6MZQ0 368 aa25.18■■□□□ 1.62
CAPN1-206ENST00000526966 BRIP1Q9BX63 1249 aa25.18■■□□□ 1.62
CAPN1-206ENST00000526966 RSPH6AQ9H0K4 717 aa25.18■■□□□ 1.62
CAPN1-206ENST00000526966 TBC1D2BQ9UPU7 963 aa25.18■■□□□ 1.62
CAPN1-206ENST00000526966 CACNA1SQ13698 1873 aa25.17■■□□□ 1.62
CAPN1-206ENST00000526966 HTRA3P83110 453 aa25.17■■□□□ 1.62
CAPN1-206ENST00000526966 SMC1BQ8NDV3 1235 aa25.17■■□□□ 1.62
CAPN1-206ENST00000526966 KLRG1Q96E93 195 aa25.17■■□□□ 1.62
CAPN1-206ENST00000526966 PHACTR3Q96KR7 559 aa25.17■■□□□ 1.62
CAPN1-206ENST00000526966 PRKAR2BP31323 418 aa25.16■■□□□ 1.62
CAPN1-206ENST00000526966 ZNF330Q9Y3S2 320 aaPredicted RBP25.16■■□□□ 1.62
CAPN1-206ENST00000526966 CAMTA2O94983 1202 aa25.15■■□□□ 1.62
CAPN1-206ENST00000526966 A1BGP04217 495 aa25.15■■□□□ 1.62
CAPN1-206ENST00000526966 PDE6BP35913 854 aa25.15■■□□□ 1.62
CAPN1-206ENST00000526966 BTBD11A6QL63 1104 aa25.14■■□□□ 1.62
CAPN1-206ENST00000526966 KCNQ3O43525 872 aa25.14■■□□□ 1.62
CAPN1-206ENST00000526966 JMYQ8N9B5 988 aa25.14■■□□□ 1.62
CAPN1-206ENST00000526966 CFAP53Q96M91 514 aa25.14■■□□□ 1.62
CAPN1-206ENST00000526966 SLX4Q8IY92 1834 aa25.14■■□□□ 1.61
CAPN1-206ENST00000526966 PCNTO95613 3336 aa25.14■■□□□ 1.61
CAPN1-206ENST00000526966 VEGFAP15692 232 aaPredicted RBP25.13■■□□□ 1.61
CAPN1-206ENST00000526966 ZNF622Q969S3 477 aaKnown RBP eCLIP25.12■■□□□ 1.61
CAPN1-206ENST00000526966 CCDC24Q8N4L8 307 aa25.11■■□□□ 1.61
CAPN1-206ENST00000526966 CNBD1Q8NA66 436 aa25.11■■□□□ 1.61
CAPN1-206ENST00000526966 SETDB2Q96T68 719 aa25.11■■□□□ 1.61
CAPN1-206ENST00000526966 NPM2Q86SE8 214 aaKnown RBP25.1■■□□□ 1.61
CAPN1-206ENST00000526966 DZIP3Q86Y13 1208 aaKnown RBP25.1■■□□□ 1.61
CAPN1-206ENST00000526966 USP16Q9Y5T5 823 aa25.1■■□□□ 1.61
CAPN1-206ENST00000526966 LTBP3Q9NS15 1303 aa25.1■■□□□ 1.61
CAPN1-206ENST00000526966 C21orf2O43822 256 aa25.09■■□□□ 1.61
CAPN1-206ENST00000526966 NUDCQ9Y266 331 aa25.09■■□□□ 1.61
CAPN1-206ENST00000526966 POTECB2RU33 542 aa25.08■■□□□ 1.61
CAPN1-206ENST00000526966 SRGNP10124 158 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms