RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 GPR162Q16538 588 aa16.55■□□□□ 0.24
SSSCA1-203ENST00000526877 DNAJC10Q8IXB1 793 aa16.55■□□□□ 0.24
SSSCA1-203ENST00000526877 GYS1P13807 737 aa16.54■□□□□ 0.24
SSSCA1-203ENST00000526877 GOLGA2Q08379 1002 aa16.54■□□□□ 0.24
SSSCA1-203ENST00000526877 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
SSSCA1-203ENST00000526877 WWC1Q8IX03 1113 aa16.54■□□□□ 0.24
SSSCA1-203ENST00000526877 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
SSSCA1-203ENST00000526877 UBR2Q8IWV8 1755 aa16.54■□□□□ 0.24
SSSCA1-203ENST00000526877 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
SSSCA1-203ENST00000526877 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
SSSCA1-203ENST00000526877 CYP19A1P11511 503 aaPredicted RBP16.53■□□□□ 0.24
SSSCA1-203ENST00000526877 WDR63Q8IWG1 891 aa16.53■□□□□ 0.24
SSSCA1-203ENST00000526877 NLGN1Q8N2Q7 840 aa16.53■□□□□ 0.24
SSSCA1-203ENST00000526877 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.24
SSSCA1-203ENST00000526877 MMP10P09238 476 aa16.52■□□□□ 0.24
SSSCA1-203ENST00000526877 YBX3P16989 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
SSSCA1-203ENST00000526877 RFC4P35249 363 aa16.52■□□□□ 0.24
SSSCA1-203ENST00000526877 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
SSSCA1-203ENST00000526877 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
SSSCA1-203ENST00000526877 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
SSSCA1-203ENST00000526877 TEFQ10587 303 aa16.5■□□□□ 0.23
SSSCA1-203ENST00000526877 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
SSSCA1-203ENST00000526877 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
SSSCA1-203ENST00000526877 KIF13BQ9NQT8 1826 aa16.49■□□□□ 0.23
SSSCA1-203ENST00000526877 ZNF790Q6PG37 636 aa16.49■□□□□ 0.23
SSSCA1-203ENST00000526877 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
SSSCA1-203ENST00000526877 ZNF496Q96IT1 587 aaPredicted RBP16.49■□□□□ 0.23
SSSCA1-203ENST00000526877 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
SSSCA1-203ENST00000526877 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
SSSCA1-203ENST00000526877 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
SSSCA1-203ENST00000526877 E9PSI1 815 aa16.48■□□□□ 0.23
SSSCA1-203ENST00000526877 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
SSSCA1-203ENST00000526877 CDCA7LQ96GN5 454 aa16.48■□□□□ 0.23
SSSCA1-203ENST00000526877 IL16Q14005 1332 aa16.47■□□□□ 0.23
SSSCA1-203ENST00000526877 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
SSSCA1-203ENST00000526877 GRIN3BO60391 1043 aa16.47■□□□□ 0.23
SSSCA1-203ENST00000526877 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
SSSCA1-203ENST00000526877 FKBP8Q14318 412 aa16.47■□□□□ 0.23
SSSCA1-203ENST00000526877 TTC5Q8N0Z6 440 aa16.47■□□□□ 0.23
SSSCA1-203ENST00000526877 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
SSSCA1-203ENST00000526877 KIAA1551Q9HCM1 1747 aa16.47■□□□□ 0.23
SSSCA1-203ENST00000526877 KCNQ3O43525 872 aa16.46■□□□□ 0.23
SSSCA1-203ENST00000526877 TM4SF1P30408 202 aa16.46■□□□□ 0.23
SSSCA1-203ENST00000526877 ZNF784Q8NCA9 323 aaPredicted RBP16.46■□□□□ 0.23
SSSCA1-203ENST00000526877 HEG1Q9ULI3 1381 aa16.46■□□□□ 0.23
SSSCA1-203ENST00000526877 MCM10Q7L590 875 aa16.45■□□□□ 0.22
SSSCA1-203ENST00000526877 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
SSSCA1-203ENST00000526877 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
SSSCA1-203ENST00000526877 EIF5P55010 431 aaKnown RBP16.44■□□□□ 0.22
SSSCA1-203ENST00000526877 DDR1Q08345 913 aa16.44■□□□□ 0.22
SSSCA1-203ENST00000526877 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
SSSCA1-203ENST00000526877 USPL1Q5W0Q7 1092 aa16.44■□□□□ 0.22
SSSCA1-203ENST00000526877 NARFQ9UHQ1 456 aa16.44■□□□□ 0.22
SSSCA1-203ENST00000526877 PARP3Q9Y6F1 533 aa16.44■□□□□ 0.22
SSSCA1-203ENST00000526877 C10orf71Q711Q0 1435 aa16.44■□□□□ 0.22
SSSCA1-203ENST00000526877 N4BP2Q86UW6 1770 aaPredicted RBP16.43■□□□□ 0.22
SSSCA1-203ENST00000526877 PXDNLA1KZ92 1463 aa16.43■□□□□ 0.22
SSSCA1-203ENST00000526877 STARD3NLO95772 234 aa16.43■□□□□ 0.22
SSSCA1-203ENST00000526877 TGFB2P61812 414 aa16.43■□□□□ 0.22
SSSCA1-203ENST00000526877 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
SSSCA1-203ENST00000526877 FMNL2Q96PY5 1086 aa16.43■□□□□ 0.22
SSSCA1-203ENST00000526877 TEX13AQ9BXU3 409 aaPredicted RBP16.43■□□□□ 0.22
SSSCA1-203ENST00000526877 BCL2L12Q9HB09 334 aa16.43■□□□□ 0.22
SSSCA1-203ENST00000526877 COL15A1P39059 1388 aa16.42■□□□□ 0.22
SSSCA1-203ENST00000526877 POLRMTO00411 1230 aaKnown RBP16.42■□□□□ 0.22
SSSCA1-203ENST00000526877 ZPR1O75312 459 aa16.42■□□□□ 0.22
SSSCA1-203ENST00000526877 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
SSSCA1-203ENST00000526877 DUSP27Q5VZP5 1158 aa16.42■□□□□ 0.22
SSSCA1-203ENST00000526877 A0A0G2JLW4 131 aa16.41■□□□□ 0.22
SSSCA1-203ENST00000526877 KCNA3P22001 575 aa16.41■□□□□ 0.22
SSSCA1-203ENST00000526877 GNAI1P63096 354 aa16.41■□□□□ 0.22
SSSCA1-203ENST00000526877 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
SSSCA1-203ENST00000526877 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
SSSCA1-203ENST00000526877 A1BGP04217 495 aa16.4■□□□□ 0.22
SSSCA1-203ENST00000526877 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
SSSCA1-203ENST00000526877 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
SSSCA1-203ENST00000526877 LAS1LQ9Y4W2 734 aaKnown RBP16.4■□□□□ 0.22
SSSCA1-203ENST00000526877 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
SSSCA1-203ENST00000526877 BRCA1P38398 1863 aaKnown RBP16.39■□□□□ 0.22
SSSCA1-203ENST00000526877 DPEP1P16444 411 aa16.39■□□□□ 0.21
SSSCA1-203ENST00000526877 NFIXQ14938 502 aa16.39■□□□□ 0.21
SSSCA1-203ENST00000526877 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
SSSCA1-203ENST00000526877 AFDNP55196 1824 aaKnown RBP16.39■□□□□ 0.21
SSSCA1-203ENST00000526877 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
SSSCA1-203ENST00000526877 IL6STP40189 918 aaPredicted RBP16.38■□□□□ 0.21
SSSCA1-203ENST00000526877 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
SSSCA1-203ENST00000526877 NRXN2Q9P2S2 1712 aa16.37■□□□□ 0.21
SSSCA1-203ENST00000526877 A0A087WZG4 1122 aa16.36■□□□□ 0.21
SSSCA1-203ENST00000526877 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
SSSCA1-203ENST00000526877 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
SSSCA1-203ENST00000526877 MIS18AQ9NYP9 233 aa16.36■□□□□ 0.21
SSSCA1-203ENST00000526877 TBC1D2BQ9UPU7 963 aa16.36■□□□□ 0.21
SSSCA1-203ENST00000526877 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
SSSCA1-203ENST00000526877 TSR2Q969E8 191 aaKnown RBP16.35■□□□□ 0.21
SSSCA1-203ENST00000526877 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
SSSCA1-203ENST00000526877 CHL1O00533 1208 aa16.34■□□□□ 0.21
SSSCA1-203ENST00000526877 SERPINB2P05120 415 aa16.34■□□□□ 0.21
SSSCA1-203ENST00000526877 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
SSSCA1-203ENST00000526877 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
SSSCA1-203ENST00000526877 KDM3BQ7LBC6 1761 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms