RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 KIAA1107Q9UPP5 1409 aa8.7□□□□□ -1.02
SF3B2-205ENST00000526653 ATP7AQ04656 1500 aa8.7□□□□□ -1.02
SF3B2-205ENST00000526653 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
SF3B2-205ENST00000526653 KCTD15Q96SI1 283 aaPredicted RBP8.69□□□□□ -1.02
SF3B2-205ENST00000526653 HMX1Q9NP08 348 aaPredicted RBP8.69□□□□□ -1.02
SF3B2-205ENST00000526653 CCNB3Q8WWL7 1395 aa8.69□□□□□ -1.02
SF3B2-205ENST00000526653 NLRP1Q9C000 1473 aa8.69□□□□□ -1.02
SF3B2-205ENST00000526653 ARHGAP35Q9NRY4 1499 aa8.69□□□□□ -1.02
SF3B2-205ENST00000526653 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
SF3B2-205ENST00000526653 PTK2Q05397 1052 aa8.68□□□□□ -1.02
SF3B2-205ENST00000526653 TSEN34Q9BSV6 310 aaKnown RBP8.68□□□□□ -1.02
SF3B2-205ENST00000526653 QTRT2Q9H974 415 aaKnown RBP8.68□□□□□ -1.02
SF3B2-205ENST00000526653 CDV3Q9UKY7 258 aaKnown RBP8.68□□□□□ -1.02
SF3B2-205ENST00000526653 SOS2Q07890 1332 aaPredicted RBP8.68□□□□□ -1.02
SF3B2-205ENST00000526653 PZPP20742 1482 aa8.68□□□□□ -1.02
SF3B2-205ENST00000526653 ITSN2Q9NZM3 1697 aa8.68□□□□□ -1.02
SF3B2-205ENST00000526653 STRCP1A6NGW2 1772 aa8.68□□□□□ -1.02
SF3B2-205ENST00000526653 RFC5P40937 340 aa8.67□□□□□ -1.02
SF3B2-205ENST00000526653 CBLBQ13191 982 aa8.67□□□□□ -1.02
SF3B2-205ENST00000526653 SPATA31A6Q5VVP1 1343 aa8.67□□□□□ -1.02
SF3B2-205ENST00000526653 ADAM32Q8TC27 787 aa8.67□□□□□ -1.02
SF3B2-205ENST00000526653 PGPEP1Q9NXJ5 209 aa8.67□□□□□ -1.02
SF3B2-205ENST00000526653 GPSM3Q9Y4H4 160 aa8.67□□□□□ -1.02
SF3B2-205ENST00000526653 RNF17Q9BXT8 1623 aaKnown RBP8.66□□□□□ -1.02
SF3B2-205ENST00000526653 INTS6LQ5JSJ4 861 aaKnown RBP8.66□□□□□ -1.02
SF3B2-205ENST00000526653 DNMT3LQ9UJW3 386 aa8.66□□□□□ -1.02
SF3B2-205ENST00000526653 POLR1AO95602 1720 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-205ENST00000526653 PREX2Q70Z35 1606 aa8.65□□□□□ -1.02
SF3B2-205ENST00000526653 EEA1Q15075 1411 aa8.65□□□□□ -1.02
SF3B2-205ENST00000526653 AFF2P51816 1311 aa8.65□□□□□ -1.02
SF3B2-205ENST00000526653 TSPY4P0CV99 314 aa8.65□□□□□ -1.02
SF3B2-205ENST00000526653 TSPY10P0CW01 314 aa8.65□□□□□ -1.02
SF3B2-205ENST00000526653 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
SF3B2-205ENST00000526653 Q6ZVU0 165 aa8.65□□□□□ -1.02
SF3B2-205ENST00000526653 C14orf37Q86TY3 774 aa8.65□□□□□ -1.02
SF3B2-205ENST00000526653 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
SF3B2-205ENST00000526653 DEPDC5O75140 1603 aa8.65□□□□□ -1.03
SF3B2-205ENST00000526653 PLXNC1O60486 1568 aa8.65□□□□□ -1.03
SF3B2-205ENST00000526653 PLEKHH2Q8IVE3 1493 aa8.64□□□□□ -1.03
SF3B2-205ENST00000526653 VSIG8P0DPA2 414 aa8.64□□□□□ -1.03
SF3B2-205ENST00000526653 RBM6P78332 1123 aaKnown RBP8.64□□□□□ -1.03
SF3B2-205ENST00000526653 DHX9Q08211 1270 aaKnown RBP8.64□□□□□ -1.03
SF3B2-205ENST00000526653 IQGAP1P46940 1657 aa8.64□□□□□ -1.03
SF3B2-205ENST00000526653 SCAF11Q99590 1463 aaKnown RBP8.64□□□□□ -1.03
SF3B2-205ENST00000526653 MSH6P52701 1360 aa8.63□□□□□ -1.03
SF3B2-205ENST00000526653 TTLL8A6PVC2 850 aa8.63□□□□□ -1.03
SF3B2-205ENST00000526653 PPFIA3O75145 1194 aa8.63□□□□□ -1.03
SF3B2-205ENST00000526653 NEUROD2Q15784 382 aa8.63□□□□□ -1.03
SF3B2-205ENST00000526653 ZSCAN1Q8NBB4 408 aa8.63□□□□□ -1.03
SF3B2-205ENST00000526653 PNMA1Q8ND90 353 aa8.63□□□□□ -1.03
SF3B2-205ENST00000526653 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
SF3B2-205ENST00000526653 C8orf37Q96NL8 207 aa8.63□□□□□ -1.03
SF3B2-205ENST00000526653 CASKIN1Q8WXD9 1431 aa8.63□□□□□ -1.03
SF3B2-205ENST00000526653 TRIM34Q9BYJ4 488 aa8.62□□□□□ -1.03
SF3B2-205ENST00000526653 KDM5DQ9BY66 1539 aa8.62□□□□□ -1.03
SF3B2-205ENST00000526653 CCDC18Q5T9S5 1454 aa8.62□□□□□ -1.03
SF3B2-205ENST00000526653 RTEL1-TNFRSF6BF6WH68 1400 aa8.62□□□□□ -1.03
SF3B2-205ENST00000526653 LRP6O75581 1613 aa8.62□□□□□ -1.03
SF3B2-205ENST00000526653 SPINT1O43278 529 aa8.61□□□□□ -1.03
SF3B2-205ENST00000526653 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.61□□□□□ -1.03
SF3B2-205ENST00000526653 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
SF3B2-205ENST00000526653 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
SF3B2-205ENST00000526653 NGLY1Q96IV0 654 aa8.61□□□□□ -1.03
SF3B2-205ENST00000526653 MBD5Q9P267 1494 aa8.61□□□□□ -1.03
SF3B2-205ENST00000526653 ROBO1Q9Y6N7 1651 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 ATF3P18847 181 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 RAB15P59190 212 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 IDI1Q13907 227 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 TMEM259Q4ZIN3 620 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
SF3B2-205ENST00000526653 AGBL1Q96MI9 1066 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 TMPRSS4Q9NRS4 437 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 INO80Q9ULG1 1556 aaPredicted RBP8.6□□□□□ -1.03
SF3B2-205ENST00000526653 CDC42BPAQ5VT25 1732 aa8.6□□□□□ -1.03
SF3B2-205ENST00000526653 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
SF3B2-205ENST00000526653 ADAMTS2O95450 1211 aa8.59□□□□□ -1.03
SF3B2-205ENST00000526653 SYNMO15061 1565 aa8.59□□□□□ -1.03
SF3B2-205ENST00000526653 MTUS2Q5JR59 1369 aa8.59□□□□□ -1.03
SF3B2-205ENST00000526653 TMEM2Q9UHN6 1383 aa8.59□□□□□ -1.03
SF3B2-205ENST00000526653 NCOA2Q15596 1464 aa8.58□□□□□ -1.04
SF3B2-205ENST00000526653 RELBQ01201 579 aa8.58□□□□□ -1.04
SF3B2-205ENST00000526653 PTSQ03393 145 aa8.58□□□□□ -1.04
SF3B2-205ENST00000526653 C19orf44Q9H6X5 657 aa8.58□□□□□ -1.04
SF3B2-205ENST00000526653 ERVH48-1M5A8F1 160 aa8.57□□□□□ -1.04
SF3B2-205ENST00000526653 ZNF784Q8NCA9 323 aaPredicted RBP8.57□□□□□ -1.04
SF3B2-205ENST00000526653 LRRIQ1Q96JM4 1722 aa8.57□□□□□ -1.04
SF3B2-205ENST00000526653 ERVK-7P63135 1459 aa8.57□□□□□ -1.04
SF3B2-205ENST00000526653 ESPNB1AK53 854 aa8.56□□□□□ -1.04
SF3B2-205ENST00000526653 CTSOP43234 321 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-205ENST00000526653 BRPF1P55201 1214 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-205ENST00000526653 BRINP3Q76B58 766 aa8.56□□□□□ -1.04
SF3B2-205ENST00000526653 DDX17Q92841 729 aaKnown RBP8.56□□□□□ -1.04
SF3B2-205ENST00000526653 LRRC59Q96AG4 307 aaKnown RBP8.56□□□□□ -1.04
SF3B2-205ENST00000526653 GJD4Q96KN9 370 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-205ENST00000526653 INSM2Q96T92 566 aaPredicted RBP8.56□□□□□ -1.04
SF3B2-205ENST00000526653 ATAD2Q6PL18 1390 aa8.56□□□□□ -1.04
SF3B2-205ENST00000526653 XIRP1Q702N8 1843 aaKnown RBP8.56□□□□□ -1.04
SF3B2-205ENST00000526653 LRRC9Q6ZRR7 1453 aa8.56□□□□□ -1.04
SF3B2-205ENST00000526653 CDK12Q9NYV4 1490 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms