RNA–Protein interactions for RNA: ENST00000526504.5

ME3-205, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 1,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-205ENST00000526504 CHMP4BQ9H444 224 aaKnown RBP28.32■■■□□ 2.12
ME3-205ENST00000526504 BCL11BQ9C0K0 894 aaPredicted RBP28.31■■■□□ 2.12
ME3-205ENST00000526504 TRIM37O94972 964 aa28.3■■■□□ 2.12
ME3-205ENST00000526504 RGS3P49796 1198 aa28.3■■■□□ 2.12
ME3-205ENST00000526504 PTF1AQ7RTS3 328 aa28.3■■■□□ 2.12
ME3-205ENST00000526504 SLC39A6Q13433 755 aa28.29■■■□□ 2.12
ME3-205ENST00000526504 ZNF790Q6PG37 636 aa28.29■■■□□ 2.12
ME3-205ENST00000526504 ABCC4O15439 1325 aa28.29■■■□□ 2.12
ME3-205ENST00000526504 ELL2O00472 640 aaPredicted RBP28.29■■■□□ 2.12
ME3-205ENST00000526504 TTC5Q8N0Z6 440 aa28.29■■■□□ 2.12
ME3-205ENST00000526504 API5Q9BZZ5 524 aaKnown RBP28.28■■■□□ 2.12
ME3-205ENST00000526504 ASAP1Q9ULH1 1129 aa28.28■■■□□ 2.12
ME3-205ENST00000526504 C8orf34Q49A92 452 aa28.27■■■□□ 2.12
ME3-205ENST00000526504 IPO9Q96P70 1041 aaKnown RBP28.27■■■□□ 2.12
ME3-205ENST00000526504 ATG3Q9NT62 314 aa28.27■■■□□ 2.12
ME3-205ENST00000526504 KCNQ3O43525 872 aa28.26■■■□□ 2.11
ME3-205ENST00000526504 KDM3BQ7LBC6 1761 aa28.25■■■□□ 2.11
ME3-205ENST00000526504 SMARCC1Q92922 1105 aaPredicted RBP28.24■■■□□ 2.11
ME3-205ENST00000526504 PDZRN3Q9UPQ7 1066 aa28.24■■■□□ 2.11
ME3-205ENST00000526504 PAPPAQ13219 1627 aa28.24■■■□□ 2.11
ME3-205ENST00000526504 BTAF1O14981 1849 aa28.23■■■□□ 2.11
ME3-205ENST00000526504 ZBTB7BO15156 539 aaPredicted RBP28.22■■■□□ 2.11
ME3-205ENST00000526504 EIF4A1P60842 406 aaKnown RBP28.22■■■□□ 2.11
ME3-205ENST00000526504 ANP32EQ9BTT0 268 aa28.22■■■□□ 2.11
ME3-205ENST00000526504 ZNF496Q96IT1 587 aaPredicted RBP28.21■■■□□ 2.11
ME3-205ENST00000526504 PALLDQ8WX93 1383 aa28.2■■■□□ 2.11
ME3-205ENST00000526504 PTCD1O75127 700 aaKnown RBP28.2■■■□□ 2.11
ME3-205ENST00000526504 SMC5Q8IY18 1101 aa28.2■■■□□ 2.11
ME3-205ENST00000526504 FMNL2Q96PY5 1086 aa28.2■■■□□ 2.11
ME3-205ENST00000526504 KCPQ6ZWJ8 1503 aa28.18■■■□□ 2.1
ME3-205ENST00000526504 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
ME3-205ENST00000526504 UBR2Q8IWV8 1755 aa28.18■■■□□ 2.1
ME3-205ENST00000526504 PTPRCP08575 1304 aa28.17■■■□□ 2.1
ME3-205ENST00000526504 KRT24Q2M2I5 525 aa28.17■■■□□ 2.1
ME3-205ENST00000526504 RBM42Q9BTD8 480 aaKnown RBP28.17■■■□□ 2.1
ME3-205ENST00000526504 APBA3O96018 575 aa28.16■■■□□ 2.1
ME3-205ENST00000526504 NOP58Q9Y2X3 529 aaKnown RBP28.16■■■□□ 2.1
ME3-205ENST00000526504 CACNA1FO60840 1977 aa28.16■■■□□ 2.1
ME3-205ENST00000526504 INTS3Q68E01 1043 aaKnown RBP28.15■■■□□ 2.1
ME3-205ENST00000526504 HEG1Q9ULI3 1381 aa28.15■■■□□ 2.1
ME3-205ENST00000526504 LOC102724428A0A0B4J2F2 783 aa28.14■■■□□ 2.09
ME3-205ENST00000526504 SIK1P57059 783 aa28.14■■■□□ 2.09
ME3-205ENST00000526504 TNS1Q9HBL0 1735 aaKnown RBP28.13■■■□□ 2.09
ME3-205ENST00000526504 GIGYF1O75420 1035 aaPredicted RBP28.13■■■□□ 2.09
ME3-205ENST00000526504 SNRPA1P09661 255 aaKnown RBP28.13■■■□□ 2.09
ME3-205ENST00000526504 SF3B2Q13435 895 aaKnown RBP28.13■■■□□ 2.09
ME3-205ENST00000526504 VSIG10Q8N0Z9 540 aa28.13■■■□□ 2.09
ME3-205ENST00000526504 ERICH6Q7L0X2 663 aa28.12■■■□□ 2.09
ME3-205ENST00000526504 NPM2Q86SE8 214 aaKnown RBP28.12■■■□□ 2.09
ME3-205ENST00000526504 ILDR2Q71H61 639 aa28.11■■■□□ 2.09
ME3-205ENST00000526504 PLSCR1O15162 318 aa28.11■■■□□ 2.09
ME3-205ENST00000526504 SLC4A9Q96Q91 983 aa28.11■■■□□ 2.09
ME3-205ENST00000526504 HOXB7P09629 217 aa28.1■■■□□ 2.09
ME3-205ENST00000526504 CCDC125Q86Z20 511 aa28.1■■■□□ 2.09
ME3-205ENST00000526504 ATP6V1AP38606 617 aa28.09■■■□□ 2.09
ME3-205ENST00000526504 ZBTB47Q9UFB7 747 aaPredicted RBP28.09■■■□□ 2.09
ME3-205ENST00000526504 PRAMEF22A3QJZ6 481 aa28.09■■■□□ 2.09
ME3-205ENST00000526504 CCNL1Q9UK58 526 aaPredicted RBP28.08■■■□□ 2.09
ME3-205ENST00000526504 LY75O60449 1722 aa28.08■■■□□ 2.08
ME3-205ENST00000526504 DDRGK1Q96HY6 314 aa28.07■■■□□ 2.08
ME3-205ENST00000526504 TEX13AQ9BXU3 409 aaPredicted RBP28.07■■■□□ 2.08
ME3-205ENST00000526504 GCC1Q96CN9 775 aa28.06■■■□□ 2.08
ME3-205ENST00000526504 SLC4A2P04920 1241 aa28.06■■■□□ 2.08
ME3-205ENST00000526504 NUCB1Q02818 461 aa28.06■■■□□ 2.08
ME3-205ENST00000526504 DNAJC10Q8IXB1 793 aa28.06■■■□□ 2.08
ME3-205ENST00000526504 BAG6P46379 1132 aa28.05■■■□□ 2.08
ME3-205ENST00000526504 SLC27A3Q5K4L6 730 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 USP16Q9Y5T5 823 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 C5P01031 1676 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 ZNF831Q5JPB2 1677 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 EIF2S2P20042 333 aaKnown RBP28.04■■■□□ 2.08
ME3-205ENST00000526504 KCNQ4P56696 695 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 ITPK1Q13572 414 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 TXNRD1Q16881 649 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 HDGFL1Q5TGJ6 251 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 CHMP4AQ9BY43 222 aa28.04■■■□□ 2.08
ME3-205ENST00000526504 STARD3NLO95772 234 aa28.03■■■□□ 2.08
ME3-205ENST00000526504 CCDC30Q5VVM6 783 aa28.02■■■□□ 2.08
ME3-205ENST00000526504 RGPD3A6NKT7 1758 aaPredicted RBP28.02■■■□□ 2.08
ME3-205ENST00000526504 RGPD4Q7Z3J3 1758 aa28.02■■■□□ 2.08
ME3-205ENST00000526504 TJP1Q07157 1748 aa28.02■■■□□ 2.08
ME3-205ENST00000526504 EN1Q05925 392 aaPredicted RBP28.01■■■□□ 2.08
ME3-205ENST00000526504 PROM2Q8N271 834 aa28.01■■■□□ 2.08
ME3-205ENST00000526504 NECTIN2Q92692 538 aa28.01■■■□□ 2.08
ME3-205ENST00000526504 UPF1Q92900 1129 aaKnown RBP eCLIP28.01■■■□□ 2.08
ME3-205ENST00000526504 STK31Q9BXU1 1019 aa28.01■■■□□ 2.08
ME3-205ENST00000526504 CICQ96RK0 1608 aaPredicted RBP28.01■■■□□ 2.07
ME3-205ENST00000526504 SIRT2Q8IXJ6 389 aa28■■■□□ 2.07
ME3-205ENST00000526504 CAMKK2Q96RR4 588 aa28■■■□□ 2.07
ME3-205ENST00000526504 LRRC4BQ9NT99 713 aa28■■■□□ 2.07
ME3-205ENST00000526504 LAMB4A4D0S4 1761 aa28■■■□□ 2.07
ME3-205ENST00000526504 CYP19A1P11511 503 aaPredicted RBP27.99■■■□□ 2.07
ME3-205ENST00000526504 DEFB132Q7Z7B7 95 aa27.99■■■□□ 2.07
ME3-205ENST00000526504 N4BP2Q86UW6 1770 aaPredicted RBP27.99■■■□□ 2.07
ME3-205ENST00000526504 CHD1LQ86WJ1 897 aa27.99■■■□□ 2.07
ME3-205ENST00000526504 LINC00116Q8NCU8 138 aa27.99■■■□□ 2.07
ME3-205ENST00000526504 C1orf115Q9H7X2 142 aa27.99■■■□□ 2.07
ME3-205ENST00000526504 HMGB2P26583 209 aaKnown RBP27.97■■■□□ 2.07
ME3-205ENST00000526504 EZH2Q15910 746 aaKnown RBP27.97■■■□□ 2.07
ME3-205ENST00000526504 CCT4P50991 539 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms