RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-208ENST00000526369 IFNL2Q8IZJ0 200 aa13.4□□□□□ -0.26
PPFIA1-208ENST00000526369 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
PPFIA1-208ENST00000526369 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
PPFIA1-208ENST00000526369 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
PPFIA1-208ENST00000526369 HTATSF1O43719 755 aaKnown RBP13.39□□□□□ -0.27
PPFIA1-208ENST00000526369 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
PPFIA1-208ENST00000526369 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
PPFIA1-208ENST00000526369 BCS1LQ9Y276 419 aa13.39□□□□□ -0.27
PPFIA1-208ENST00000526369 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
PPFIA1-208ENST00000526369 KIF3CO14782 793 aa13.38□□□□□ -0.27
PPFIA1-208ENST00000526369 PLEKHO1Q53GL0 409 aaPredicted RBP13.38□□□□□ -0.27
PPFIA1-208ENST00000526369 ARHGAP27Q6ZUM4 889 aa13.38□□□□□ -0.27
PPFIA1-208ENST00000526369 RTCBQ9Y3I0 505 aaKnown RBP13.38□□□□□ -0.27
PPFIA1-208ENST00000526369 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
PPFIA1-208ENST00000526369 GNAT3A8MTJ3 354 aa13.37□□□□□ -0.27
PPFIA1-208ENST00000526369 MTHFSDQ2M296 383 aaKnown RBP13.37□□□□□ -0.27
PPFIA1-208ENST00000526369 C1orf141Q5JVX7 400 aa13.37□□□□□ -0.27
PPFIA1-208ENST00000526369 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
PPFIA1-208ENST00000526369 ZNF428Q96B54 188 aa13.37□□□□□ -0.27
PPFIA1-208ENST00000526369 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
PPFIA1-208ENST00000526369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.272e-7■■□□□ 13.3
PPFIA1-208ENST00000526369 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
PPFIA1-208ENST00000526369 KIF16BQ96L93 1317 aa13.36□□□□□ -0.27
PPFIA1-208ENST00000526369 DPEP1P16444 411 aa13.35□□□□□ -0.27
PPFIA1-208ENST00000526369 RFC4P35249 363 aa13.35□□□□□ -0.27
PPFIA1-208ENST00000526369 ZNF530Q6P9A1 599 aaPredicted RBP13.35□□□□□ -0.27
PPFIA1-208ENST00000526369 NLGN1Q8N2Q7 840 aa13.35□□□□□ -0.27
PPFIA1-208ENST00000526369 ARHGEF1Q92888 912 aaKnown RBP13.35□□□□□ -0.27
PPFIA1-208ENST00000526369 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
PPFIA1-208ENST00000526369 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
PPFIA1-208ENST00000526369 PPP4R2Q9NY27 417 aa13.35□□□□□ -0.27
PPFIA1-208ENST00000526369 TGFB2P61812 414 aa13.34□□□□□ -0.27
PPFIA1-208ENST00000526369 EXOSC9Q06265 439 aaKnown RBP13.34□□□□□ -0.27
PPFIA1-208ENST00000526369 MCM10Q7L590 875 aa13.34□□□□□ -0.27
PPFIA1-208ENST00000526369 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
PPFIA1-208ENST00000526369 CCDC87Q9NVE4 849 aa13.34□□□□□ -0.27
PPFIA1-208ENST00000526369 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
PPFIA1-208ENST00000526369 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
PPFIA1-208ENST00000526369 MS4A1P11836 297 aa13.33□□□□□ -0.28
PPFIA1-208ENST00000526369 CABP4P57796 275 aa13.33□□□□□ -0.28
PPFIA1-208ENST00000526369 DCTN1Q14203 1278 aa13.33□□□□□ -0.28
PPFIA1-208ENST00000526369 AKAP4Q5JQC9 854 aa13.33□□□□□ -0.28
PPFIA1-208ENST00000526369 MBIPQ9NS73 344 aa13.33□□□□□ -0.28
PPFIA1-208ENST00000526369 PXDNLA1KZ92 1463 aa13.33□□□□□ -0.28
PPFIA1-208ENST00000526369 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 ERVV-2B6SEH9 535 aa13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 PTCD1O75127 700 aaKnown RBP13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 ZNF853P0CG23 659 aa13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 GYS1P13807 737 aa13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 APLP1P51693 650 aa13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 RARSP54136 660 aaKnown RBP13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 NMRK2Q9NPI5 230 aa13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 ITGB4P16144 1822 aa13.32□□□□□ -0.28
PPFIA1-208ENST00000526369 UBR3Q6ZT12 1888 aa13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 RPS6KA4O75676 772 aa13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 TOMM70O94826 608 aa13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 HSP90AB1P08238 724 aaKnown RBP13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 ALDH1L2Q3SY69 923 aa13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 DCAF5Q96JK2 942 aa13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
PPFIA1-208ENST00000526369 ADRA2BP18089 450 aa13.3□□□□□ -0.28
PPFIA1-208ENST00000526369 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
PPFIA1-208ENST00000526369 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
PPFIA1-208ENST00000526369 FTSJ3Q8IY81 847 aaKnown RBP13.3□□□□□ -0.28
PPFIA1-208ENST00000526369 FRAT1Q92837 279 aaPredicted RBP13.3□□□□□ -0.28
PPFIA1-208ENST00000526369 ADAMTS7Q9UKP4 1686 aa13.3□□□□□ -0.28
PPFIA1-208ENST00000526369 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
PPFIA1-208ENST00000526369 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
PPFIA1-208ENST00000526369 PLIN1O60240 522 aa13.29□□□□□ -0.28
PPFIA1-208ENST00000526369 BCAR3O75815 825 aa13.29□□□□□ -0.28
PPFIA1-208ENST00000526369 TEFQ10587 303 aa13.29□□□□□ -0.28
PPFIA1-208ENST00000526369 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
PPFIA1-208ENST00000526369 C16orf71Q8IYS4 520 aaPredicted RBP13.29□□□□□ -0.28
PPFIA1-208ENST00000526369 SOS1Q07889 1333 aaPredicted RBP13.29□□□□□ -0.28
PPFIA1-208ENST00000526369 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
PPFIA1-208ENST00000526369 C10orf71Q711Q0 1435 aa13.29□□□□□ -0.28
PPFIA1-208ENST00000526369 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 CHL1O00533 1208 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 IPO8O15397 1037 aaKnown RBP13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 KCNA3P22001 575 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 HTRA3P83110 453 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 PDE3AQ14432 1141 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 ZKSCAN2Q63HK3 967 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 CCDC136Q96JN2 1154 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 BCL2L13Q9BXK5 485 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 PIM2Q9P1W9 311 aa13.28□□□□□ -0.28
PPFIA1-208ENST00000526369 CHRNA5P30532 468 aa13.27□□□□□ -0.29
PPFIA1-208ENST00000526369 CRKLP46109 303 aaKnown RBP13.27□□□□□ -0.29
PPFIA1-208ENST00000526369 DALRD3Q5D0E6 543 aaKnown RBP13.27□□□□□ -0.29
PPFIA1-208ENST00000526369 DNAJC5GQ8N7S2 189 aa13.27□□□□□ -0.29
PPFIA1-208ENST00000526369 CRBNQ96SW2 442 aa13.27□□□□□ -0.29
PPFIA1-208ENST00000526369 MRC1P22897 1456 aa13.27□□□□□ -0.29
PPFIA1-208ENST00000526369 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
PPFIA1-208ENST00000526369 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
PPFIA1-208ENST00000526369 RNF181Q9P0P0 153 aa13.26□□□□□ -0.29
PPFIA1-208ENST00000526369 KDM6AO15550 1401 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms