RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
CCDC90B-206ENST00000526265 WASHC2AQ641Q2 1341 aa13.82□□□□□ -0.2
CCDC90B-206ENST00000526265 SAFB2Q14151 953 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC90B-206ENST00000526265 SNRKQ9NRH2 765 aa13.81□□□□□ -0.2
CCDC90B-206ENST00000526265 PLEKHH1Q9ULM0 1364 aa13.81□□□□□ -0.2
CCDC90B-206ENST00000526265 ADH1BP00325 375 aa13.81□□□□□ -0.2
CCDC90B-206ENST00000526265 CTDSPL2Q05D32 466 aa13.81□□□□□ -0.2
CCDC90B-206ENST00000526265 PROSER2Q86WR7 435 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-206ENST00000526265 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
CCDC90B-206ENST00000526265 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-206ENST00000526265 ATAD2Q6PL18 1390 aa13.8□□□□□ -0.2
CCDC90B-206ENST00000526265 APBB1O00213 710 aa13.8□□□□□ -0.2
CCDC90B-206ENST00000526265 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-206ENST00000526265 TULP4Q9NRJ4 1543 aa13.79□□□□□ -0.2
CCDC90B-206ENST00000526265 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
CCDC90B-206ENST00000526265 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
CCDC90B-206ENST00000526265 C11orf95C9JLR9 678 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-206ENST00000526265 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
CCDC90B-206ENST00000526265 ZNF516Q92618 1163 aa13.79□□□□□ -0.2
CCDC90B-206ENST00000526265 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
CCDC90B-206ENST00000526265 TLL1O43897 1013 aa13.78□□□□□ -0.2
CCDC90B-206ENST00000526265 SRPK2P78362 688 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-206ENST00000526265 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-206ENST00000526265 CDK19Q9BWU1 502 aa13.78□□□□□ -0.2
CCDC90B-206ENST00000526265 CDC42BPGQ6DT37 1551 aa13.78□□□□□ -0.2
CCDC90B-206ENST00000526265 JUNDP17535 347 aa13.77□□□□□ -0.21
CCDC90B-206ENST00000526265 POLR3GLQ9BT43 218 aa13.77□□□□□ -0.21
CCDC90B-206ENST00000526265 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.21
CCDC90B-206ENST00000526265 DCCP43146 1447 aa13.76□□□□□ -0.21
CCDC90B-206ENST00000526265 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-206ENST00000526265 LYPD8Q6UX82 237 aa13.76□□□□□ -0.21
CCDC90B-206ENST00000526265 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
CCDC90B-206ENST00000526265 ZNF335Q9H4Z2 1342 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-206ENST00000526265 ITSN1Q15811 1721 aa13.75□□□□□ -0.21
CCDC90B-206ENST00000526265 TMEM94Q12767 1356 aa13.75□□□□□ -0.21
CCDC90B-206ENST00000526265 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
CCDC90B-206ENST00000526265 DXOO77932 396 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-206ENST00000526265 MMP16P51512 607 aa13.74□□□□□ -0.21
CCDC90B-206ENST00000526265 ZMYND15Q9H091 742 aa13.74□□□□□ -0.21
CCDC90B-206ENST00000526265 FMN2Q9NZ56 1722 aa13.74□□□□□ -0.21
CCDC90B-206ENST00000526265 LRRC7Q96NW7 1537 aa13.73□□□□□ -0.21
CCDC90B-206ENST00000526265 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-206ENST00000526265 MSH6P52701 1360 aa13.73□□□□□ -0.21
CCDC90B-206ENST00000526265 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-206ENST00000526265 KCNC4Q03721 635 aa13.73□□□□□ -0.21
CCDC90B-206ENST00000526265 PTPRNQ16849 979 aa13.73□□□□□ -0.21
CCDC90B-206ENST00000526265 LRRN4Q8WUT4 740 aa13.73□□□□□ -0.21
CCDC90B-206ENST00000526265 MYOM1P52179 1685 aa13.72□□□□□ -0.21
CCDC90B-206ENST00000526265 ATF3P18847 181 aa13.72□□□□□ -0.21
CCDC90B-206ENST00000526265 NUDT16Q96DE0 195 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-206ENST00000526265 PRM3Q9NNZ6 103 aa13.72□□□□□ -0.21
CCDC90B-206ENST00000526265 HMX1Q9NP08 348 aaPredicted RBP13.72□□□□□ -0.21
CCDC90B-206ENST00000526265 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-206ENST00000526265 A6NJR5 290 aa13.71□□□□□ -0.22
CCDC90B-206ENST00000526265 RAD21O60216 631 aa13.71□□□□□ -0.22
CCDC90B-206ENST00000526265 TMC1Q8TDI8 760 aa13.71□□□□□ -0.22
CCDC90B-206ENST00000526265 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.22
CCDC90B-206ENST00000526265 SLC6A16Q9GZN6 736 aa13.71□□□□□ -0.22
CCDC90B-206ENST00000526265 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.22
CCDC90B-206ENST00000526265 ATP7BP35670 1465 aa13.7□□□□□ -0.22
CCDC90B-206ENST00000526265 DIEXFQ68CQ4 756 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-206ENST00000526265 PRDM9Q9NQV7 894 aa13.7□□□□□ -0.22
CCDC90B-206ENST00000526265 LTBP4Q8N2S1 1624 aa13.7□□□□□ -0.22
CCDC90B-206ENST00000526265 TOPAZ1Q8N9V7 1692 aa13.7□□□□□ -0.22
CCDC90B-206ENST00000526265 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
CCDC90B-206ENST00000526265 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-206ENST00000526265 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
CCDC90B-206ENST00000526265 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
CCDC90B-206ENST00000526265 NKX2-3Q8TAU0 364 aa13.68□□□□□ -0.22
CCDC90B-206ENST00000526265 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
CCDC90B-206ENST00000526265 COG6Q9Y2V7 657 aa13.68□□□□□ -0.22
CCDC90B-206ENST00000526265 CLUAP1Q96AJ1 413 aa13.67□□□□□ -0.22
CCDC90B-206ENST00000526265 SLC12A5Q9H2X9 1139 aa13.67□□□□□ -0.22
CCDC90B-206ENST00000526265 PANK3Q9H999 370 aa13.67□□□□□ -0.22
CCDC90B-206ENST00000526265 CABP1Q9NZU7 370 aa13.67□□□□□ -0.22
CCDC90B-206ENST00000526265 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
CCDC90B-206ENST00000526265 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-206ENST00000526265 CCNYL3P0C7X3 344 aa13.66□□□□□ -0.22
CCDC90B-206ENST00000526265 POM121Q96HA1 1249 aa13.66□□□□□ -0.22
CCDC90B-206ENST00000526265 KIF1AQ12756 1690 aa13.66□□□□□ -0.22
CCDC90B-206ENST00000526265 PRR36Q9H6K5 1346 aa13.66□□□□□ -0.22
CCDC90B-206ENST00000526265 F12P00748 615 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-206ENST00000526265 NUDT12Q9BQG2 462 aa13.65□□□□□ -0.22
CCDC90B-206ENST00000526265 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
CCDC90B-206ENST00000526265 IQSEC2Q5JU85 1478 aa13.65□□□□□ -0.22
CCDC90B-206ENST00000526265 AKAP12Q02952 1782 aa13.64□□□□□ -0.23
CCDC90B-206ENST00000526265 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-206ENST00000526265 S1PR4O95977 384 aa13.64□□□□□ -0.23
CCDC90B-206ENST00000526265 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
CCDC90B-206ENST00000526265 MST1RQ04912 1400 aa13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 CPSF1Q10570 1443 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 POLR3AO14802 1390 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 KTN1Q86UP2 1357 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 MON2Q7Z3U7 1717 aa13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 NR6A1Q15406 480 aa13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 EVA1BQ9NVM1 165 aa13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
CCDC90B-206ENST00000526265 A0A1W2PP64 1363 aa13.62□□□□□ -0.23
CCDC90B-206ENST00000526265 NPC1L1Q9UHC9 1359 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms