RNA–Protein interactions for RNA: ENST00000526232.1

CPNE7-204, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-204ENST00000526232 DCTN1Q14203 1278 aa23.92■■□□□ 1.42
CPNE7-204ENST00000526232 PARP3Q9Y6F1 533 aa23.92■■□□□ 1.42
CPNE7-204ENST00000526232 C10orf71Q711Q0 1435 aa23.92■■□□□ 1.42
CPNE7-204ENST00000526232 NFE2L2Q16236 605 aa23.91■■□□□ 1.42
CPNE7-204ENST00000526232 GRIN3BO60391 1043 aa23.9■■□□□ 1.42
CPNE7-204ENST00000526232 CANXP27824 592 aaKnown RBP23.9■■□□□ 1.42
CPNE7-204ENST00000526232 FKBP8Q14318 412 aa23.9■■□□□ 1.42
CPNE7-204ENST00000526232 KCNQ3O43525 872 aa23.89■■□□□ 1.41
CPNE7-204ENST00000526232 YBX3P16989 372 aaKnown RBP eCLIP23.89■■□□□ 1.41
CPNE7-204ENST00000526232 USPL1Q5W0Q7 1092 aa23.89■■□□□ 1.41
CPNE7-204ENST00000526232 NARFQ9UHQ1 456 aa23.89■■□□□ 1.41
CPNE7-204ENST00000526232 A0A087WZG4 1122 aa23.87■■□□□ 1.41
CPNE7-204ENST00000526232 PRKRIP1Q9H875 184 aaPredicted RBP23.87■■□□□ 1.41
CPNE7-204ENST00000526232 TAF7Q15545 349 aaPredicted RBP23.86■■□□□ 1.41
CPNE7-204ENST00000526232 UTRNP46939 3433 aa23.86■■□□□ 1.41
CPNE7-204ENST00000526232 PXDNLA1KZ92 1463 aa23.86■■□□□ 1.41
CPNE7-204ENST00000526232 KIF13BQ9NQT8 1826 aa23.85■■□□□ 1.41
CPNE7-204ENST00000526232 EIF5P55010 431 aaKnown RBP23.85■■□□□ 1.41
CPNE7-204ENST00000526232 DDR1Q08345 913 aa23.85■■□□□ 1.41
CPNE7-204ENST00000526232 WDR43Q15061 677 aaKnown RBP eCLIP23.85■■□□□ 1.41
CPNE7-204ENST00000526232 NPM2Q86SE8 214 aaKnown RBP23.85■■□□□ 1.41
CPNE7-204ENST00000526232 PNISRQ8TF01 805 aaKnown RBP23.85■■□□□ 1.41
CPNE7-204ENST00000526232 DLG5Q8TDM6 1919 aa23.84■■□□□ 1.41
CPNE7-204ENST00000526232 SNRPA1P09661 255 aaKnown RBP23.84■■□□□ 1.41
CPNE7-204ENST00000526232 IL6STP40189 918 aaPredicted RBP23.84■■□□□ 1.41
CPNE7-204ENST00000526232 TGFB2P61812 414 aa23.84■■□□□ 1.41
CPNE7-204ENST00000526232 ZNF330Q9Y3S2 320 aaPredicted RBP23.84■■□□□ 1.41
CPNE7-204ENST00000526232 CHD4Q14839 1912 aa23.83■■□□□ 1.41
CPNE7-204ENST00000526232 POLRMTO00411 1230 aaKnown RBP23.82■■□□□ 1.4
CPNE7-204ENST00000526232 WWC3Q9ULE0 1092 aa23.82■■□□□ 1.4
CPNE7-204ENST00000526232 SCN7AQ01118 1682 aa23.81■■□□□ 1.4
CPNE7-204ENST00000526232 A1BGP04217 495 aa23.81■■□□□ 1.4
CPNE7-204ENST00000526232 TM4SF1P30408 202 aa23.81■■□□□ 1.4
CPNE7-204ENST00000526232 KIAA1551Q9HCM1 1747 aa23.81■■□□□ 1.4
CPNE7-204ENST00000526232 LMOD3Q0VAK6 560 aa23.8■■□□□ 1.4
CPNE7-204ENST00000526232 NFIXQ14938 502 aa23.8■■□□□ 1.4
CPNE7-204ENST00000526232 THUMPD2Q9BTF0 503 aaKnown RBP23.8■■□□□ 1.4
CPNE7-204ENST00000526232 BCL2L12Q9HB09 334 aa23.8■■□□□ 1.4
CPNE7-204ENST00000526232 USP16Q9Y5T5 823 aa23.8■■□□□ 1.4
CPNE7-204ENST00000526232 GOLGB1Q14789 3259 aaKnown RBP23.79■■□□□ 1.4
CPNE7-204ENST00000526232 KDM3BQ7LBC6 1761 aa23.79■■□□□ 1.4
CPNE7-204ENST00000526232 PRAMEF22A3QJZ6 481 aa23.79■■□□□ 1.4
CPNE7-204ENST00000526232 RIPK4P57078 832 aa23.79■■□□□ 1.4
CPNE7-204ENST00000526232 MIS18AQ9NYP9 233 aa23.79■■□□□ 1.4
CPNE7-204ENST00000526232 A0A0G2JLW4 131 aa23.77■■□□□ 1.4
CPNE7-204ENST00000526232 DPEP1P16444 411 aa23.77■■□□□ 1.4
CPNE7-204ENST00000526232 CCDC146Q8IYE0 955 aa23.77■■□□□ 1.4
CPNE7-204ENST00000526232 TBC1D2BQ9UPU7 963 aa23.77■■□□□ 1.4
CPNE7-204ENST00000526232 LAMB4A4D0S4 1761 aa23.76■■□□□ 1.39
CPNE7-204ENST00000526232 TMPOP42166 694 aaKnown RBP23.76■■□□□ 1.39
CPNE7-204ENST00000526232 ZNF784Q8NCA9 323 aaPredicted RBP23.76■■□□□ 1.39
CPNE7-204ENST00000526232 RUNDC1Q96C34 613 aa23.76■■□□□ 1.39
CPNE7-204ENST00000526232 N4BP2Q86UW6 1770 aaPredicted RBP23.75■■□□□ 1.39
CPNE7-204ENST00000526232 SERPINB2P05120 415 aa23.74■■□□□ 1.39
CPNE7-204ENST00000526232 PIP4K2AP48426 406 aaPredicted RBP23.74■■□□□ 1.39
CPNE7-204ENST00000526232 BICDL1Q6ZP65 573 aa23.74■■□□□ 1.39
CPNE7-204ENST00000526232 DZIP3Q86Y13 1208 aaKnown RBP23.74■■□□□ 1.39
CPNE7-204ENST00000526232 BCS1LQ9Y276 419 aa23.74■■□□□ 1.39
CPNE7-204ENST00000526232 NRXN2Q9P2S2 1712 aa23.73■■□□□ 1.39
CPNE7-204ENST00000526232 CAMTA2O94983 1202 aa23.73■■□□□ 1.39
CPNE7-204ENST00000526232 EIF4A1P60842 406 aaKnown RBP23.73■■□□□ 1.39
CPNE7-204ENST00000526232 ADAMTS8Q9UP79 889 aa23.73■■□□□ 1.39
CPNE7-204ENST00000526232 RRP7AQ9Y3A4 280 aaKnown RBP23.73■■□□□ 1.39
CPNE7-204ENST00000526232 ZNF316A6NFI3 1004 aaPredicted RBP23.72■■□□□ 1.39
CPNE7-204ENST00000526232 TSPYL4Q9UJ04 414 aa23.72■■□□□ 1.39
CPNE7-204ENST00000526232 CARMIL3Q8ND23 1372 aa23.72■■□□□ 1.39
CPNE7-204ENST00000526232 BCORQ6W2J9 1755 aa23.72■■□□□ 1.39
CPNE7-204ENST00000526232 GIGYF1O75420 1035 aaPredicted RBP23.71■■□□□ 1.39
CPNE7-204ENST00000526232 NEUROD2Q15784 382 aa23.71■■□□□ 1.39
CPNE7-204ENST00000526232 TBC1D9BQ66K14 1250 aa23.71■■□□□ 1.39
CPNE7-204ENST00000526232 BABAM1Q9NWV8 329 aa23.71■■□□□ 1.39
CPNE7-204ENST00000526232 NBPF26B4DH59 902 aa23.7■■□□□ 1.38
CPNE7-204ENST00000526232 NBPF10Q6P3W6 841 aaKnown RBP23.7■■□□□ 1.38
CPNE7-204ENST00000526232 NBPF15Q8N660 670 aa23.7■■□□□ 1.38
CPNE7-204ENST00000526232 PIM2Q9P1W9 311 aa23.7■■□□□ 1.38
CPNE7-204ENST00000526232 ZNF652Q9Y2D9 606 aa23.7■■□□□ 1.38
CPNE7-204ENST00000526232 AFDNP55196 1824 aaKnown RBP23.69■■□□□ 1.38
CPNE7-204ENST00000526232 KCNA3P22001 575 aa23.69■■□□□ 1.38
CPNE7-204ENST00000526232 BRCA1P38398 1863 aaKnown RBP23.68■■□□□ 1.38
CPNE7-204ENST00000526232 CHRNA5P30532 468 aa23.68■■□□□ 1.38
CPNE7-204ENST00000526232 SETDB2Q96T68 719 aa23.68■■□□□ 1.38
CPNE7-204ENST00000526232 DALRD3Q5D0E6 543 aaKnown RBP23.67■■□□□ 1.38
CPNE7-204ENST00000526232 RGL2O15211 777 aa23.66■■□□□ 1.38
CPNE7-204ENST00000526232 CLEC4GQ6UXB4 293 aa23.66■■□□□ 1.38
CPNE7-204ENST00000526232 NPHP1O15259 732 aa23.65■■□□□ 1.38
CPNE7-204ENST00000526232 ADCY9O60503 1353 aa23.65■■□□□ 1.38
CPNE7-204ENST00000526232 ERBB4Q15303 1308 aa23.64■■□□□ 1.38
CPNE7-204ENST00000526232 PRR5LQ6MZQ0 368 aa23.64■■□□□ 1.37
CPNE7-204ENST00000526232 CNBD1Q8NA66 436 aa23.64■■□□□ 1.37
CPNE7-204ENST00000526232 TRIM35Q9UPQ4 493 aa23.64■■□□□ 1.37
CPNE7-204ENST00000526232 ATP10DQ9P241 1426 aa23.64■■□□□ 1.37
CPNE7-204ENST00000526232 ARFGEF1Q9Y6D6 1849 aa23.62■■□□□ 1.37
CPNE7-204ENST00000526232 ST5P78524 1137 aa23.62■■□□□ 1.37
CPNE7-204ENST00000526232 ARHGAP27Q6ZUM4 889 aa23.62■■□□□ 1.37
CPNE7-204ENST00000526232 C2CD5Q86YS7 1000 aa23.62■■□□□ 1.37
CPNE7-204ENST00000526232 BRIP1Q9BX63 1249 aa23.62■■□□□ 1.37
CPNE7-204ENST00000526232 H0YIN7 160 aa23.61■■□□□ 1.37
CPNE7-204ENST00000526232 PDE6BP35913 854 aa23.61■■□□□ 1.37
CPNE7-204ENST00000526232 KIF6Q6ZMV9 814 aa23.61■■□□□ 1.37
CPNE7-204ENST00000526232 PDZRN3Q9UPQ7 1066 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms