RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 USP42Q9H9J4 1324 aaKnown RBP22.52■■□□□ 1.2
CCS-203ENST00000526058 CANXP27824 592 aaKnown RBP22.51■■□□□ 1.19
CCS-203ENST00000526058 GPR162Q16538 588 aa22.51■■□□□ 1.19
CCS-203ENST00000526058 PELP1Q8IZL8 1130 aaKnown RBP22.51■■□□□ 1.19
CCS-203ENST00000526058 FKBP8Q14318 412 aa22.5■■□□□ 1.19
CCS-203ENST00000526058 TAF7Q15545 349 aaPredicted RBP22.5■■□□□ 1.19
CCS-203ENST00000526058 THUMPD2Q9BTF0 503 aaKnown RBP22.5■■□□□ 1.19
CCS-203ENST00000526058 TEX13AQ9BXU3 409 aaPredicted RBP22.5■■□□□ 1.19
CCS-203ENST00000526058 MIS18AQ9NYP9 233 aa22.5■■□□□ 1.19
CCS-203ENST00000526058 COL15A1P39059 1388 aa22.5■■□□□ 1.19
CCS-203ENST00000526058 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
CCS-203ENST00000526058 PRAMEF22A3QJZ6 481 aa22.48■■□□□ 1.19
CCS-203ENST00000526058 ZPR1O75312 459 aa22.48■■□□□ 1.19
CCS-203ENST00000526058 USPL1Q5W0Q7 1092 aa22.48■■□□□ 1.19
CCS-203ENST00000526058 YY1P25490 414 aa22.47■■□□□ 1.19
CCS-203ENST00000526058 CCDC146Q8IYE0 955 aa22.47■■□□□ 1.19
CCS-203ENST00000526058 NARFQ9UHQ1 456 aa22.47■■□□□ 1.19
CCS-203ENST00000526058 USP16Q9Y5T5 823 aa22.47■■□□□ 1.19
CCS-203ENST00000526058 KIF13BQ9NQT8 1826 aa22.46■■□□□ 1.19
CCS-203ENST00000526058 A1BGP04217 495 aa22.46■■□□□ 1.19
CCS-203ENST00000526058 YBX3P16989 372 aaKnown RBP eCLIP22.46■■□□□ 1.19
CCS-203ENST00000526058 EIF5P55010 431 aaKnown RBP22.46■■□□□ 1.19
CCS-203ENST00000526058 RIPK4P57078 832 aa22.46■■□□□ 1.19
CCS-203ENST00000526058 PARP3Q9Y6F1 533 aa22.46■■□□□ 1.19
CCS-203ENST00000526058 CHD4Q14839 1912 aa22.45■■□□□ 1.18
CCS-203ENST00000526058 WDR43Q15061 677 aaKnown RBP eCLIP22.45■■□□□ 1.18
CCS-203ENST00000526058 ADAMTS8Q9UP79 889 aa22.45■■□□□ 1.18
CCS-203ENST00000526058 KDM3BQ7LBC6 1761 aa22.45■■□□□ 1.18
CCS-203ENST00000526058 SNRPA1P09661 255 aaKnown RBP22.44■■□□□ 1.18
CCS-203ENST00000526058 DDR1Q08345 913 aa22.44■■□□□ 1.18
CCS-203ENST00000526058 BCL2L12Q9HB09 334 aa22.44■■□□□ 1.18
CCS-203ENST00000526058 TM4SF1P30408 202 aa22.43■■□□□ 1.18
CCS-203ENST00000526058 TMPOP42166 694 aaKnown RBP22.43■■□□□ 1.18
CCS-203ENST00000526058 WWC3Q9ULE0 1092 aa22.43■■□□□ 1.18
CCS-203ENST00000526058 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
CCS-203ENST00000526058 ZNF330Q9Y3S2 320 aaPredicted RBP22.43■■□□□ 1.18
CCS-203ENST00000526058 N4BP2Q86UW6 1770 aaPredicted RBP22.43■■□□□ 1.18
CCS-203ENST00000526058 KIAA1551Q9HCM1 1747 aa22.43■■□□□ 1.18
CCS-203ENST00000526058 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
CCS-203ENST00000526058 IL6STP40189 918 aaPredicted RBP22.42■■□□□ 1.18
CCS-203ENST00000526058 PIP4K2AP48426 406 aaPredicted RBP22.42■■□□□ 1.18
CCS-203ENST00000526058 NEUROD2Q15784 382 aa22.41■■□□□ 1.18
CCS-203ENST00000526058 PNISRQ8TF01 805 aaKnown RBP22.41■■□□□ 1.18
CCS-203ENST00000526058 RUNDC1Q96C34 613 aa22.41■■□□□ 1.18
CCS-203ENST00000526058 A0A087WZG4 1122 aa22.4■■□□□ 1.18
CCS-203ENST00000526058 POLRMTO00411 1230 aaKnown RBP22.4■■□□□ 1.18
CCS-203ENST00000526058 NFIXQ14938 502 aa22.4■■□□□ 1.18
CCS-203ENST00000526058 TBC1D2BQ9UPU7 963 aa22.4■■□□□ 1.18
CCS-203ENST00000526058 AFDNP55196 1824 aaKnown RBP22.39■■□□□ 1.17
CCS-203ENST00000526058 PXDNLA1KZ92 1463 aa22.39■■□□□ 1.17
CCS-203ENST00000526058 EIF4A1P60842 406 aaKnown RBP22.38■■□□□ 1.17
CCS-203ENST00000526058 TGFB2P61812 414 aa22.38■■□□□ 1.17
CCS-203ENST00000526058 SCN7AQ01118 1682 aa22.37■■□□□ 1.17
CCS-203ENST00000526058 A0A0G2JLW4 131 aa22.37■■□□□ 1.17
CCS-203ENST00000526058 GRIN3BO60391 1043 aa22.37■■□□□ 1.17
CCS-203ENST00000526058 CCDC184Q52MB2 194 aa22.37■■□□□ 1.17
CCS-203ENST00000526058 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
CCS-203ENST00000526058 NBPF26B4DH59 902 aa22.36■■□□□ 1.17
CCS-203ENST00000526058 GIGYF1O75420 1035 aaPredicted RBP22.36■■□□□ 1.17
CCS-203ENST00000526058 LMOD3Q0VAK6 560 aa22.36■■□□□ 1.17
CCS-203ENST00000526058 NBPF10Q6P3W6 841 aaKnown RBP22.36■■□□□ 1.17
CCS-203ENST00000526058 NBPF15Q8N660 670 aa22.36■■□□□ 1.17
CCS-203ENST00000526058 DPEP1P16444 411 aa22.35■■□□□ 1.17
CCS-203ENST00000526058 BICDL1Q6ZP65 573 aa22.35■■□□□ 1.17
CCS-203ENST00000526058 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
CCS-203ENST00000526058 TSPYL4Q9UJ04 414 aa22.35■■□□□ 1.17
CCS-203ENST00000526058 TRIM35Q9UPQ4 493 aa22.35■■□□□ 1.17
CCS-203ENST00000526058 NRXN2Q9P2S2 1712 aa22.34■■□□□ 1.17
CCS-203ENST00000526058 CAMTA2O94983 1202 aa22.34■■□□□ 1.17
CCS-203ENST00000526058 TBC1D9BQ66K14 1250 aa22.34■■□□□ 1.17
CCS-203ENST00000526058 DZIP3Q86Y13 1208 aaKnown RBP22.34■■□□□ 1.17
CCS-203ENST00000526058 BCORQ6W2J9 1755 aa22.33■■□□□ 1.17
CCS-203ENST00000526058 SERPINB2P05120 415 aa22.33■■□□□ 1.17
CCS-203ENST00000526058 BRCA1P38398 1863 aaKnown RBP22.32■■□□□ 1.16
CCS-203ENST00000526058 KCNA3P22001 575 aa22.32■■□□□ 1.16
CCS-203ENST00000526058 CHRNA5P30532 468 aa22.3■■□□□ 1.16
CCS-203ENST00000526058 APAF1O14727 1248 aa22.29■■□□□ 1.16
CCS-203ENST00000526058 ANP32CO43423 234 aa22.29■■□□□ 1.16
CCS-203ENST00000526058 BABAM1Q9NWV8 329 aa22.29■■□□□ 1.16
CCS-203ENST00000526058 BCS1LQ9Y276 419 aa22.29■■□□□ 1.16
CCS-203ENST00000526058 ZNF784Q8NCA9 323 aaPredicted RBP22.28■■□□□ 1.16
CCS-203ENST00000526058 CARMIL3Q8ND23 1372 aa22.27■■□□□ 1.16
CCS-203ENST00000526058 NGEFQ8N5V2 710 aa22.27■■□□□ 1.16
CCS-203ENST00000526058 LAS1LQ9Y4W2 734 aaKnown RBP22.27■■□□□ 1.16
CCS-203ENST00000526058 CHL1O00533 1208 aa22.26■■□□□ 1.15
CCS-203ENST00000526058 CCDC24Q8N4L8 307 aa22.26■■□□□ 1.15
CCS-203ENST00000526058 SETDB2Q96T68 719 aa22.26■■□□□ 1.15
CCS-203ENST00000526058 MYL6BP14649 208 aa22.25■■□□□ 1.15
CCS-203ENST00000526058 PIM2Q9P1W9 311 aa22.25■■□□□ 1.15
CCS-203ENST00000526058 ANKRD31Q8N7Z5 1873 aa22.24■■□□□ 1.15
CCS-203ENST00000526058 EIF2S2P20042 333 aaKnown RBP22.24■■□□□ 1.15
CCS-203ENST00000526058 PRR5LQ6MZQ0 368 aa22.24■■□□□ 1.15
CCS-203ENST00000526058 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
CCS-203ENST00000526058 ARFGEF1Q9Y6D6 1849 aa22.24■■□□□ 1.15
CCS-203ENST00000526058 HLFQ16534 295 aa22.23■■□□□ 1.15
CCS-203ENST00000526058 KRT24Q2M2I5 525 aa22.23■■□□□ 1.15
CCS-203ENST00000526058 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
CCS-203ENST00000526058 DALRD3Q5D0E6 543 aaKnown RBP22.22■■□□□ 1.15
CCS-203ENST00000526058 TTLL7Q6ZT98 887 aa22.22■■□□□ 1.15
CCS-203ENST00000526058 ZNF652Q9Y2D9 606 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms