RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 ABCC10Q5T3U5 1492 aa8.23□□□□□ -1.09
TGFBR3-207ENST00000525962 DHX37Q8IY37 1157 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 EDC3Q96F86 508 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 EID1Q9Y6B2 187 aa8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 WASLO00401 505 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 POLR3DP05423 398 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 CWF19L2Q2TBE0 894 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 ZNF692Q9BU19 519 aaPredicted RBP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 RIOK3O14730 519 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 ZNF445P59923 1031 aa8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 HAND2P61296 217 aa8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 ATP5J2-PTCD1G3V325 749 aa8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 PTCD1O75127 700 aaKnown RBP8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 KIF1BPQ96EK5 621 aa8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 CHPF2Q9P2E5 772 aa8.22□□□□□ -1.09
TGFBR3-207ENST00000525962 BTBD11A6QL63 1104 aa8.21□□□□□ -1.09
TGFBR3-207ENST00000525962 ZC3H6P61129 1189 aaKnown RBP8.21□□□□□ -1.09
TGFBR3-207ENST00000525962 UBE2HP62256 183 aa8.21□□□□□ -1.09
TGFBR3-207ENST00000525962 STK38Q15208 465 aa8.21□□□□□ -1.09
TGFBR3-207ENST00000525962 SYNE3Q6ZMZ3 975 aa8.21□□□□□ -1.09
TGFBR3-207ENST00000525962 IL16Q14005 1332 aa8.21□□□□□ -1.09
TGFBR3-207ENST00000525962 GNAT3A8MTJ3 354 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 VGLL3A8MV65 326 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 TRHP20396 242 aaPredicted RBP8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 NAA30Q147X3 362 aaPredicted RBP8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 PTPN21Q16825 1174 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 HSP90AB3PQ58FF7 597 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 RRP12Q5JTH9 1297 aaKnown RBP8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 DDX46Q7L014 1031 aaKnown RBP8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 PIBF1Q8WXW3 757 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 ARHGAP45Q92619 1136 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 SLC52A1Q9NWF4 448 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 ADGRL1O94910 1474 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 F13A1P00488 732 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 NBPF7P0C2Y1 421 aaPredicted RBP8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 PSMA5P28066 241 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 ESCO1Q5FWF5 840 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 NFXL1Q6ZNB6 911 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 CCDC144CPQ8IYA2 1237 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 PPP1R9BQ96SB3 815 aa8.21□□□□□ -1.1
TGFBR3-207ENST00000525962 ADGRL2O95490 1459 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 PTPN14Q15678 1187 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 OSCARQ8IYS5 282 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 NRBP1Q9UHY1 535 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 PYCARDQ9ULZ3 195 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 ACEP12821 1306 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 LETM1O95202 739 aaPredicted RBP8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 SERPINC1P01008 464 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 SLC39A6Q13433 755 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 HSP90AB4PQ58FF6 505 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 RASEFQ8IZ41 740 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 GOLGA6L1Q8N7Z2 621 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 BRF1Q92994 677 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 FAM227BQ96M60 508 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 ZDHHC9Q9Y397 364 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 PPRC1Q5VV67 1664 aaKnown RBP8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 RIMBP3CA6NJZ7 1639 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 RIMBP3BA6NNM3 1639 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 RIMBP3Q9UFD9 1639 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 IL13P35225 146 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 CCDC129Q6ZRS4 1044 aa8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 RBM8AQ9Y5S9 174 aaKnown RBP8.2□□□□□ -1.1
TGFBR3-207ENST00000525962 GLRX3O76003 335 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 TPM3P06753 285 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 PDCP20941 246 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 TTC5Q8N0Z6 440 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 CHMP4AQ9BY43 222 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 MAP3K2Q9Y2U5 619 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 ERVK-7P63135 1459 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 URI1O94763 535 aaPredicted RBP8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 GTF2F1P35269 517 aaKnown RBP eCLIP8.19□□□□□ -1.12e-6■□□□□ 9.9
TGFBR3-207ENST00000525962 TYRO3Q06418 890 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 OTUD7BQ6GQQ9 843 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 BCL2L12Q9HB09 334 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 HDAC5Q9UQL6 1122 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 USP16Q9Y5T5 823 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 LIG1P18858 919 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 CPLX3Q8WVH0 158 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 DNAAF4Q8WXU2 420 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 FANCAO15360 1455 aa8.19□□□□□ -1.1
TGFBR3-207ENST00000525962 KIF13AQ9H1H9 1805 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 PLCD3Q8N3E9 789 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 LRRC59Q96AG4 307 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 SNX14Q9Y5W7 946 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 JAK2O60674 1132 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 BRD1O95696 1058 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 DDX58O95786 925 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 ATP8B2P98198 1209 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 ADCK5Q3MIX3 580 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 TEX35Q5T0J7 233 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 LARP1Q6PKG0 1096 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 RNF216Q9NWF9 866 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 RPGRIP1LQ68CZ1 1315 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 LARGE1O95461 756 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 SKILP12757 684 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 PTH1RQ03431 593 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 CDC37L1Q7L3B6 337 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 TMC6Q7Z403 805 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms