RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 ANKRD31Q8N7Z5 1873 aa28.46■■■□□ 2.15
PACSIN3-203ENST00000525725 SBF1O95248 1867 aa28.45■■■□□ 2.15
PACSIN3-203ENST00000525725 A0A0G2JLW4 131 aa28.45■■■□□ 2.14
PACSIN3-203ENST00000525725 DPEP1P16444 411 aa28.45■■■□□ 2.14
PACSIN3-203ENST00000525725 HEG1Q9ULI3 1381 aa28.45■■■□□ 2.14
PACSIN3-203ENST00000525725 KCNA3P22001 575 aa28.44■■■□□ 2.14
PACSIN3-203ENST00000525725 PPP2R1AP30153 589 aa28.44■■■□□ 2.14
PACSIN3-203ENST00000525725 TM4SF1P30408 202 aa28.44■■■□□ 2.14
PACSIN3-203ENST00000525725 CNGB1Q14028 1251 aaPredicted RBP28.44■■■□□ 2.14
PACSIN3-203ENST00000525725 CFAP53Q96M91 514 aa28.44■■■□□ 2.14
PACSIN3-203ENST00000525725 PRKAR2BP31323 418 aa28.43■■■□□ 2.14
PACSIN3-203ENST00000525725 NARFQ9UHQ1 456 aa28.43■■■□□ 2.14
PACSIN3-203ENST00000525725 LAMB4A4D0S4 1761 aa28.42■■■□□ 2.14
PACSIN3-203ENST00000525725 USPL1Q5W0Q7 1092 aa28.42■■■□□ 2.14
PACSIN3-203ENST00000525725 ZNF790Q6PG37 636 aa28.42■■■□□ 2.14
PACSIN3-203ENST00000525725 PHACTR3Q96KR7 559 aa28.42■■■□□ 2.14
PACSIN3-203ENST00000525725 COL11A2P13942 1736 aaPredicted RBP28.41■■■□□ 2.14
PACSIN3-203ENST00000525725 ZNF496Q96IT1 587 aaPredicted RBP28.41■■■□□ 2.14
PACSIN3-203ENST00000525725 BCL2L12Q9HB09 334 aa28.41■■■□□ 2.14
PACSIN3-203ENST00000525725 TEFQ10587 303 aa28.4■■■□□ 2.14
PACSIN3-203ENST00000525725 TTC5Q8N0Z6 440 aa28.4■■■□□ 2.14
PACSIN3-203ENST00000525725 ZPR1O75312 459 aa28.39■■■□□ 2.14
PACSIN3-203ENST00000525725 BCS1LQ9Y276 419 aa28.39■■■□□ 2.14
PACSIN3-203ENST00000525725 KDM3BQ7LBC6 1761 aa28.39■■■□□ 2.13
PACSIN3-203ENST00000525725 EIF5P55010 431 aaKnown RBP28.38■■■□□ 2.13
PACSIN3-203ENST00000525725 GPBP1L1Q9HC44 474 aaPredicted RBP28.38■■■□□ 2.13
PACSIN3-203ENST00000525725 SENP3-EIF4A1A0A087X0R7 540 aa28.37■■■□□ 2.13
PACSIN3-203ENST00000525725 NFIXQ14938 502 aa28.37■■■□□ 2.13
PACSIN3-203ENST00000525725 NUDCQ9Y266 331 aa28.35■■■□□ 2.13
PACSIN3-203ENST00000525725 STARD3NLO95772 234 aa28.34■■■□□ 2.13
PACSIN3-203ENST00000525725 CARMIL3Q8ND23 1372 aa28.34■■■□□ 2.13
PACSIN3-203ENST00000525725 ARFGEF2Q9Y6D5 1785 aa28.34■■■□□ 2.13
PACSIN3-203ENST00000525725 FCHSD2O94868 740 aa28.33■■■□□ 2.13
PACSIN3-203ENST00000525725 PIM2Q9P1W9 311 aa28.33■■■□□ 2.13
PACSIN3-203ENST00000525725 FMNL2Q96PY5 1086 aa28.32■■■□□ 2.12
PACSIN3-203ENST00000525725 U2AF1L5P0DN76 240 aaPredicted RBP28.31■■■□□ 2.12
PACSIN3-203ENST00000525725 CANXP27824 592 aaKnown RBP28.31■■■□□ 2.12
PACSIN3-203ENST00000525725 U2AF1Q01081 240 aaKnown RBP eCLIP28.31■■■□□ 2.12
PACSIN3-203ENST00000525725 TEX13AQ9BXU3 409 aaPredicted RBP28.31■■■□□ 2.12
PACSIN3-203ENST00000525725 TNRC6CQ9HCJ0 1690 aaKnown RBP28.31■■■□□ 2.12
PACSIN3-203ENST00000525725 TIAM2Q8IVF5 1701 aa28.31■■■□□ 2.12
PACSIN3-203ENST00000525725 CHRNA5P30532 468 aa28.3■■■□□ 2.12
PACSIN3-203ENST00000525725 IL6STP40189 918 aaPredicted RBP28.29■■■□□ 2.12
PACSIN3-203ENST00000525725 DALRD3Q5D0E6 543 aaKnown RBP28.29■■■□□ 2.12
PACSIN3-203ENST00000525725 ZNF526Q8TF50 670 aaPredicted RBP28.29■■■□□ 2.12
PACSIN3-203ENST00000525725 A0A087WZG4 1122 aa28.28■■■□□ 2.12
PACSIN3-203ENST00000525725 KIF3CO14782 793 aa28.28■■■□□ 2.12
PACSIN3-203ENST00000525725 KCNQ3O43525 872 aa28.28■■■□□ 2.12
PACSIN3-203ENST00000525725 CCDC88AQ3V6T2 1871 aa28.27■■■□□ 2.12
PACSIN3-203ENST00000525725 BTBD11A6QL63 1104 aa28.27■■■□□ 2.12
PACSIN3-203ENST00000525725 CACNA1SQ13698 1873 aa28.26■■■□□ 2.11
PACSIN3-203ENST00000525725 FER1L6Q2WGJ9 1857 aa28.26■■■□□ 2.11
PACSIN3-203ENST00000525725 ARHGAP27Q6ZUM4 889 aa28.26■■■□□ 2.11
PACSIN3-203ENST00000525725 HTATSF1O43719 755 aaKnown RBP28.25■■■□□ 2.11
PACSIN3-203ENST00000525725 SERPINB2P05120 415 aa28.25■■■□□ 2.11
PACSIN3-203ENST00000525725 MCM10Q7L590 875 aa28.24■■■□□ 2.11
PACSIN3-203ENST00000525725 DICER1Q9UPY3 1922 aaKnown RBP28.24■■■□□ 2.11
PACSIN3-203ENST00000525725 A1BGP04217 495 aa28.22■■■□□ 2.11
PACSIN3-203ENST00000525725 TBC1D9BQ66K14 1250 aa28.22■■■□□ 2.11
PACSIN3-203ENST00000525725 CAMTA2O94983 1202 aa28.21■■■□□ 2.11
PACSIN3-203ENST00000525725 RTF1Q92541 710 aaKnown RBP28.21■■■□□ 2.11
PACSIN3-203ENST00000525725 C9orf131Q5VYM1 1079 aa28.2■■■□□ 2.1
PACSIN3-203ENST00000525725 PLEKHF1Q96S99 279 aa28.19■■■□□ 2.1
PACSIN3-203ENST00000525725 PRAMEF22A3QJZ6 481 aa28.18■■■□□ 2.1
PACSIN3-203ENST00000525725 DCTN1Q14203 1278 aa28.18■■■□□ 2.1
PACSIN3-203ENST00000525725 TBC1D2BQ9UPU7 963 aa28.18■■■□□ 2.1
PACSIN3-203ENST00000525725 USP16Q9Y5T5 823 aa28.18■■■□□ 2.1
PACSIN3-203ENST00000525725 SLX4Q8IY92 1834 aa28.16■■■□□ 2.1
PACSIN3-203ENST00000525725 SNRPA1P09661 255 aaKnown RBP28.16■■■□□ 2.1
PACSIN3-203ENST00000525725 PRR5LQ6MZQ0 368 aa28.16■■■□□ 2.1
PACSIN3-203ENST00000525725 ZC3H4Q9UPT8 1303 aaKnown RBP28.16■■■□□ 2.1
PACSIN3-203ENST00000525725 NUP98P52948 1817 aa28.15■■■□□ 2.1
PACSIN3-203ENST00000525725 RGL2O15211 777 aa28.15■■■□□ 2.1
PACSIN3-203ENST00000525725 HSPA6P17066 643 aa28.15■■■□□ 2.1
PACSIN3-203ENST00000525725 BICDL1Q6ZP65 573 aa28.15■■■□□ 2.1
PACSIN3-203ENST00000525725 ZNF330Q9Y3S2 320 aaPredicted RBP28.15■■■□□ 2.1
PACSIN3-203ENST00000525725 C2CD5Q86YS7 1000 aa28.14■■■□□ 2.1
PACSIN3-203ENST00000525725 WDR90Q96KV7 1748 aa28.13■■■□□ 2.09
PACSIN3-203ENST00000525725 DZIP3Q86Y13 1208 aaKnown RBP28.13■■■□□ 2.09
PACSIN3-203ENST00000525725 TTLL6Q8N841 843 aa28.13■■■□□ 2.09
PACSIN3-203ENST00000525725 BRIP1Q9BX63 1249 aa28.13■■■□□ 2.09
PACSIN3-203ENST00000525725 NMRK2Q9NPI5 230 aa28.13■■■□□ 2.09
PACSIN3-203ENST00000525725 RNF181Q9P0P0 153 aa28.13■■■□□ 2.09
PACSIN3-203ENST00000525725 RASSF7Q02833 373 aa28.12■■■□□ 2.09
PACSIN3-203ENST00000525725 PDZRN3Q9UPQ7 1066 aa28.12■■■□□ 2.09
PACSIN3-203ENST00000525725 NBPF26B4DH59 902 aa28.11■■■□□ 2.09
PACSIN3-203ENST00000525725 PIP4K2AP48426 406 aaPredicted RBP28.11■■■□□ 2.09
PACSIN3-203ENST00000525725 PRELPP51888 382 aa28.11■■■□□ 2.09
PACSIN3-203ENST00000525725 TAF7Q15545 349 aaPredicted RBP28.11■■■□□ 2.09
PACSIN3-203ENST00000525725 NBPF10Q6P3W6 841 aaKnown RBP28.11■■■□□ 2.09
PACSIN3-203ENST00000525725 NBPF15Q8N660 670 aa28.11■■■□□ 2.09
PACSIN3-203ENST00000525725 H0YIN7 160 aa28.1■■■□□ 2.09
PACSIN3-203ENST00000525725 CLEC4GQ6UXB4 293 aa28.1■■■□□ 2.09
PACSIN3-203ENST00000525725 NFKBIEO00221 500 aa28.09■■■□□ 2.09
PACSIN3-203ENST00000525725 TOMM70O94826 608 aa28.09■■■□□ 2.09
PACSIN3-203ENST00000525725 NFE2L2Q16236 605 aa28.09■■■□□ 2.09
PACSIN3-203ENST00000525725 CNBD1Q8NA66 436 aa28.09■■■□□ 2.09
PACSIN3-203ENST00000525725 PDE6BP35913 854 aa28.08■■■□□ 2.09
PACSIN3-203ENST00000525725 SETDB2Q96T68 719 aa28.08■■■□□ 2.09
PACSIN3-203ENST00000525725 LMNB1P20700 586 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms