RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 CRKLP46109 303 aaKnown RBP16.9■□□□□ 0.3
CLP1-202ENST00000525602 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
CLP1-202ENST00000525602 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
CLP1-202ENST00000525602 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
CLP1-202ENST00000525602 RTCBQ9Y3I0 505 aaKnown RBP16.9■□□□□ 0.3
CLP1-202ENST00000525602 PCNTO95613 3336 aa16.9■□□□□ 0.3
CLP1-202ENST00000525602 IFFO2Q5TF58 517 aa16.89■□□□□ 0.3
CLP1-202ENST00000525602 ZNF790Q6PG37 636 aa16.89■□□□□ 0.3
CLP1-202ENST00000525602 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.3
CLP1-202ENST00000525602 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
CLP1-202ENST00000525602 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
CLP1-202ENST00000525602 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.29
CLP1-202ENST00000525602 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.29
CLP1-202ENST00000525602 BCS1LQ9Y276 419 aa16.89■□□□□ 0.29
CLP1-202ENST00000525602 GYS1P13807 737 aa16.88■□□□□ 0.29
CLP1-202ENST00000525602 DPEP1P16444 411 aa16.88■□□□□ 0.29
CLP1-202ENST00000525602 ADRA2BP18089 450 aa16.88■□□□□ 0.29
CLP1-202ENST00000525602 TRAPPC3LQ5T215 181 aa16.88■□□□□ 0.29
CLP1-202ENST00000525602 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
CLP1-202ENST00000525602 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
CLP1-202ENST00000525602 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
CLP1-202ENST00000525602 CYP19A1P11511 503 aaPredicted RBP16.87■□□□□ 0.29
CLP1-202ENST00000525602 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
CLP1-202ENST00000525602 KCNQ3O43525 872 aa16.86■□□□□ 0.29
CLP1-202ENST00000525602 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
CLP1-202ENST00000525602 CCDC87Q9NVE4 849 aa16.86■□□□□ 0.29
CLP1-202ENST00000525602 SRP68Q9UHB9 627 aaKnown RBP16.86■□□□□ 0.29
CLP1-202ENST00000525602 CCDC146Q8IYE0 955 aa16.85■□□□□ 0.29
CLP1-202ENST00000525602 KDM3BQ7LBC6 1761 aa16.84■□□□□ 0.29
CLP1-202ENST00000525602 RFC4P35249 363 aa16.84■□□□□ 0.29
CLP1-202ENST00000525602 ARHGAP27Q6ZUM4 889 aa16.84■□□□□ 0.29
CLP1-202ENST00000525602 NLGN1Q8N2Q7 840 aa16.84■□□□□ 0.29
CLP1-202ENST00000525602 NMRK2Q9NPI5 230 aa16.84■□□□□ 0.29
CLP1-202ENST00000525602 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
CLP1-202ENST00000525602 ZBTB1Q9Y2K1 713 aa16.84■□□□□ 0.29
CLP1-202ENST00000525602 SOS1Q07889 1333 aaPredicted RBP16.84■□□□□ 0.29
CLP1-202ENST00000525602 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
CLP1-202ENST00000525602 DDR1Q08345 913 aa16.83■□□□□ 0.28
CLP1-202ENST00000525602 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
CLP1-202ENST00000525602 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
CLP1-202ENST00000525602 THUMPD2Q9BTF0 503 aaKnown RBP16.83■□□□□ 0.28
CLP1-202ENST00000525602 STARD3NLO95772 234 aa16.82■□□□□ 0.28
CLP1-202ENST00000525602 RIPK4P57078 832 aa16.82■□□□□ 0.28
CLP1-202ENST00000525602 TGFB2P61812 414 aa16.82■□□□□ 0.28
CLP1-202ENST00000525602 FKBP8Q14318 412 aa16.82■□□□□ 0.28
CLP1-202ENST00000525602 ANP32CO43423 234 aa16.81■□□□□ 0.28
CLP1-202ENST00000525602 KCNA3P22001 575 aa16.81■□□□□ 0.28
CLP1-202ENST00000525602 TEX13AQ9BXU3 409 aaPredicted RBP16.81■□□□□ 0.28
CLP1-202ENST00000525602 PARP3Q9Y6F1 533 aa16.81■□□□□ 0.28
CLP1-202ENST00000525602 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
CLP1-202ENST00000525602 COL15A1P39059 1388 aa16.81■□□□□ 0.28
CLP1-202ENST00000525602 WDR90Q96KV7 1748 aa16.81■□□□□ 0.28
CLP1-202ENST00000525602 AFDNP55196 1824 aaKnown RBP16.8■□□□□ 0.28
CLP1-202ENST00000525602 LMOD3Q0VAK6 560 aa16.8■□□□□ 0.28
CLP1-202ENST00000525602 CCDC184Q52MB2 194 aa16.8■□□□□ 0.28
CLP1-202ENST00000525602 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
CLP1-202ENST00000525602 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
CLP1-202ENST00000525602 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
CLP1-202ENST00000525602 SBF1O95248 1867 aa16.8■□□□□ 0.28
CLP1-202ENST00000525602 CANXP27824 592 aaKnown RBP16.79■□□□□ 0.28
CLP1-202ENST00000525602 CHRNA5P30532 468 aa16.79■□□□□ 0.28
CLP1-202ENST00000525602 LAMB4A4D0S4 1761 aa16.79■□□□□ 0.28
CLP1-202ENST00000525602 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
CLP1-202ENST00000525602 C9orf131Q5VYM1 1079 aa16.78■□□□□ 0.28
CLP1-202ENST00000525602 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
CLP1-202ENST00000525602 HTRA3P83110 453 aa16.77■□□□□ 0.28
CLP1-202ENST00000525602 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
CLP1-202ENST00000525602 A1BGP04217 495 aa16.77■□□□□ 0.27
CLP1-202ENST00000525602 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.27
CLP1-202ENST00000525602 USP16Q9Y5T5 823 aa16.77■□□□□ 0.27
CLP1-202ENST00000525602 SCN7AQ01118 1682 aa16.76■□□□□ 0.27
CLP1-202ENST00000525602 ZPR1O75312 459 aa16.76■□□□□ 0.27
CLP1-202ENST00000525602 TOMM70O94826 608 aa16.76■□□□□ 0.27
CLP1-202ENST00000525602 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
CLP1-202ENST00000525602 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
CLP1-202ENST00000525602 TRIM35Q9UPQ4 493 aa16.76■□□□□ 0.27
CLP1-202ENST00000525602 DLEC1Q9Y238 1755 aa16.75■□□□□ 0.27
CLP1-202ENST00000525602 POLRMTO00411 1230 aaKnown RBP16.75■□□□□ 0.27
CLP1-202ENST00000525602 IL6STP40189 918 aaPredicted RBP16.75■□□□□ 0.27
CLP1-202ENST00000525602 APLP1P51693 650 aa16.75■□□□□ 0.27
CLP1-202ENST00000525602 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
CLP1-202ENST00000525602 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
CLP1-202ENST00000525602 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
CLP1-202ENST00000525602 PIM2Q9P1W9 311 aa16.75■□□□□ 0.27
CLP1-202ENST00000525602 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
CLP1-202ENST00000525602 A0A087WZG4 1122 aa16.74■□□□□ 0.27
CLP1-202ENST00000525602 DNAJC5GQ8N7S2 189 aa16.74■□□□□ 0.27
CLP1-202ENST00000525602 RNF181Q9P0P0 153 aa16.74■□□□□ 0.27
CLP1-202ENST00000525602 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
CLP1-202ENST00000525602 NRXN2Q9P2S2 1712 aa16.74■□□□□ 0.27
CLP1-202ENST00000525602 TNRC6CQ9HCJ0 1690 aaKnown RBP16.74■□□□□ 0.27
CLP1-202ENST00000525602 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
CLP1-202ENST00000525602 APAF1O14727 1248 aa16.73■□□□□ 0.27
CLP1-202ENST00000525602 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
CLP1-202ENST00000525602 RASSF7Q02833 373 aa16.73■□□□□ 0.27
CLP1-202ENST00000525602 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
CLP1-202ENST00000525602 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
CLP1-202ENST00000525602 BCORQ6W2J9 1755 aa16.73■□□□□ 0.27
CLP1-202ENST00000525602 CCDC88AQ3V6T2 1871 aa16.72■□□□□ 0.27
CLP1-202ENST00000525602 CARMIL3Q8ND23 1372 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms