RNA–Protein interactions for RNA: ENST00000525554.1

IFITM1-203, Transcript of interferon induced transmembrane protein 1, humanhuman

TSL 3

Gene IFITM1, Length 80 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-203ENST00000525554 KCPQ6ZWJ8 1503 aa18.4■□□□□ 0.54
IFITM1-203ENST00000525554 DALRD3Q5D0E6 543 aaKnown RBP18.4■□□□□ 0.54
IFITM1-203ENST00000525554 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
IFITM1-203ENST00000525554 A0A087WZG4 1122 aa18.39■□□□□ 0.53
IFITM1-203ENST00000525554 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
IFITM1-203ENST00000525554 ZNF526Q8TF50 670 aaPredicted RBP18.39■□□□□ 0.53
IFITM1-203ENST00000525554 NUDCQ9Y266 331 aa18.39■□□□□ 0.53
IFITM1-203ENST00000525554 ZBTB1Q9Y2K1 713 aa18.38■□□□□ 0.53
IFITM1-203ENST00000525554 COL15A1P39059 1388 aa18.38■□□□□ 0.53
IFITM1-203ENST00000525554 CEP350Q5VT06 3117 aa18.38■□□□□ 0.53
IFITM1-203ENST00000525554 EIF5P55010 431 aaKnown RBP18.37■□□□□ 0.53
IFITM1-203ENST00000525554 NFIXQ14938 502 aa18.37■□□□□ 0.53
IFITM1-203ENST00000525554 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
IFITM1-203ENST00000525554 KIF3CO14782 793 aa18.36■□□□□ 0.53
IFITM1-203ENST00000525554 HSPA6P17066 643 aa18.36■□□□□ 0.53
IFITM1-203ENST00000525554 VIRMAQ69YN4 1812 aaKnown RBP18.36■□□□□ 0.53
IFITM1-203ENST00000525554 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
IFITM1-203ENST00000525554 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
IFITM1-203ENST00000525554 CEMIPQ8WUJ3 1361 aa18.35■□□□□ 0.53
IFITM1-203ENST00000525554 HEG1Q9ULI3 1381 aa18.35■□□□□ 0.53
IFITM1-203ENST00000525554 CANXP27824 592 aaKnown RBP18.35■□□□□ 0.53
IFITM1-203ENST00000525554 BCL2L12Q9HB09 334 aa18.35■□□□□ 0.53
IFITM1-203ENST00000525554 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
IFITM1-203ENST00000525554 FMNL2Q96PY5 1086 aa18.34■□□□□ 0.53
IFITM1-203ENST00000525554 TOMM70O94826 608 aa18.33■□□□□ 0.52
IFITM1-203ENST00000525554 SERPINB2P05120 415 aa18.33■□□□□ 0.52
IFITM1-203ENST00000525554 CHRNA5P30532 468 aa18.33■□□□□ 0.52
IFITM1-203ENST00000525554 PRKAR2BP31323 418 aa18.33■□□□□ 0.52
IFITM1-203ENST00000525554 IL6STP40189 918 aaPredicted RBP18.33■□□□□ 0.52
IFITM1-203ENST00000525554 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
IFITM1-203ENST00000525554 C9orf131Q5VYM1 1079 aa18.33■□□□□ 0.52
IFITM1-203ENST00000525554 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.52
IFITM1-203ENST00000525554 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
IFITM1-203ENST00000525554 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
IFITM1-203ENST00000525554 BTBD11A6QL63 1104 aa18.31■□□□□ 0.52
IFITM1-203ENST00000525554 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
IFITM1-203ENST00000525554 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
IFITM1-203ENST00000525554 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
IFITM1-203ENST00000525554 NRXN2Q9P2S2 1712 aa18.3■□□□□ 0.52
IFITM1-203ENST00000525554 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
IFITM1-203ENST00000525554 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
IFITM1-203ENST00000525554 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
IFITM1-203ENST00000525554 KDM2BQ8NHM5 1336 aa18.29■□□□□ 0.52
IFITM1-203ENST00000525554 ZC3H4Q9UPT8 1303 aaKnown RBP18.29■□□□□ 0.52
IFITM1-203ENST00000525554 H0YIN7 160 aa18.29■□□□□ 0.52
IFITM1-203ENST00000525554 TTLL6Q8N841 843 aa18.29■□□□□ 0.52
IFITM1-203ENST00000525554 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
IFITM1-203ENST00000525554 BRIP1Q9BX63 1249 aa18.28■□□□□ 0.52
IFITM1-203ENST00000525554 PDE6BP35913 854 aa18.27■□□□□ 0.52
IFITM1-203ENST00000525554 APLP1P51693 650 aa18.27■□□□□ 0.52
IFITM1-203ENST00000525554 RNF181Q9P0P0 153 aa18.27■□□□□ 0.52
IFITM1-203ENST00000525554 AFDNP55196 1824 aaKnown RBP18.27■□□□□ 0.52
IFITM1-203ENST00000525554 A1BGP04217 495 aa18.26■□□□□ 0.51
IFITM1-203ENST00000525554 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
IFITM1-203ENST00000525554 TBC1D9BQ66K14 1250 aa18.26■□□□□ 0.51
IFITM1-203ENST00000525554 C2CD5Q86YS7 1000 aa18.26■□□□□ 0.51
IFITM1-203ENST00000525554 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
IFITM1-203ENST00000525554 NMRK2Q9NPI5 230 aa18.26■□□□□ 0.51
IFITM1-203ENST00000525554 TBC1D2BQ9UPU7 963 aa18.26■□□□□ 0.51
IFITM1-203ENST00000525554 CARMIL3Q8ND23 1372 aa18.26■□□□□ 0.51
IFITM1-203ENST00000525554 RGL2O15211 777 aa18.25■□□□□ 0.51
IFITM1-203ENST00000525554 LMNB1P20700 586 aa18.25■□□□□ 0.51
IFITM1-203ENST00000525554 CLEC4GQ6UXB4 293 aa18.25■□□□□ 0.51
IFITM1-203ENST00000525554 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
IFITM1-203ENST00000525554 SETDB2Q96T68 719 aa18.25■□□□□ 0.51
IFITM1-203ENST00000525554 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
IFITM1-203ENST00000525554 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
IFITM1-203ENST00000525554 KCNQ3O43525 872 aa18.23■□□□□ 0.51
IFITM1-203ENST00000525554 CAMTA2O94983 1202 aa18.23■□□□□ 0.51
IFITM1-203ENST00000525554 NEFMP07197 916 aa18.23■□□□□ 0.51
IFITM1-203ENST00000525554 FSTL1Q12841 308 aa18.23■□□□□ 0.51
IFITM1-203ENST00000525554 ZNF330Q9Y3S2 320 aaPredicted RBP18.23■□□□□ 0.51
IFITM1-203ENST00000525554 SBF1O95248 1867 aa18.22■□□□□ 0.51
IFITM1-203ENST00000525554 TAF7Q15545 349 aaPredicted RBP18.22■□□□□ 0.51
IFITM1-203ENST00000525554 PRR5LQ6MZQ0 368 aa18.22■□□□□ 0.51
IFITM1-203ENST00000525554 MCM10Q7L590 875 aa18.22■□□□□ 0.51
IFITM1-203ENST00000525554 DZIP3Q86Y13 1208 aaKnown RBP18.22■□□□□ 0.51
IFITM1-203ENST00000525554 PNNQ9H307 717 aaKnown RBP18.21■□□□□ 0.51
IFITM1-203ENST00000525554 ZNF652Q9Y2D9 606 aa18.21■□□□□ 0.51
IFITM1-203ENST00000525554 DLEC1Q9Y238 1755 aa18.21■□□□□ 0.51
IFITM1-203ENST00000525554 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
IFITM1-203ENST00000525554 SCN7AQ01118 1682 aa18.19■□□□□ 0.5
IFITM1-203ENST00000525554 GLTPD2A6NH11 291 aa18.19■□□□□ 0.5
IFITM1-203ENST00000525554 ST5P78524 1137 aa18.19■□□□□ 0.5
IFITM1-203ENST00000525554 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
IFITM1-203ENST00000525554 CNKSR1Q969H4 720 aa18.19■□□□□ 0.5
IFITM1-203ENST00000525554 ZNF622Q969S3 477 aaKnown RBP eCLIP18.19■□□□□ 0.5
IFITM1-203ENST00000525554 RRAGCQ9HB90 399 aa18.19■□□□□ 0.5
IFITM1-203ENST00000525554 NPHP1O15259 732 aa18.18■□□□□ 0.5
IFITM1-203ENST00000525554 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
IFITM1-203ENST00000525554 NFKBIEO00221 500 aa18.17■□□□□ 0.5
IFITM1-203ENST00000525554 VEGFAP15692 232 aaPredicted RBP18.17■□□□□ 0.5
IFITM1-203ENST00000525554 RASSF7Q02833 373 aa18.17■□□□□ 0.5
IFITM1-203ENST00000525554 SOGA3Q5TF21 947 aa18.17■□□□□ 0.5
IFITM1-203ENST00000525554 DNAJC5GQ8N7S2 189 aa18.17■□□□□ 0.5
IFITM1-203ENST00000525554 SRGNP10124 158 aa18.16■□□□□ 0.5
IFITM1-203ENST00000525554 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
IFITM1-203ENST00000525554 DPY19L2Q6NUT2 758 aa18.16■□□□□ 0.5
IFITM1-203ENST00000525554 TPTE2Q6XPS3 522 aa18.16■□□□□ 0.5
IFITM1-203ENST00000525554 MASTLQ96GX5 879 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms