RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 PPP2R2DQ66LE6 453 aa5.7□□□□□ -1.5
CSDE1-209ENST00000525132 EMID1Q96A84 441 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-209ENST00000525132 SAMD9LQ8IVG5 1584 aa5.7□□□□□ -1.5
CSDE1-209ENST00000525132 IQGAP2Q13576 1575 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 PRAG1Q86YV5 1406 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 DXOO77932 396 aaKnown RBP5.69□□□□□ -1.5
CSDE1-209ENST00000525132 CLK2P49760 499 aaKnown RBP5.69□□□□□ -1.5
CSDE1-209ENST00000525132 QPCTQ16769 361 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 GGT6Q6P531 493 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 FAM196AQ6ZSG2 479 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 RIC3Q7Z5B4 369 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 RETREG3Q86VR2 466 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 SLC26A8Q96RN1 970 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 TMEM131LA2VDJ0 1609 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 PZPP20742 1482 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 ARHGAP35Q9NRY4 1499 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 SLIT2O94813 1529 aa5.69□□□□□ -1.5
CSDE1-209ENST00000525132 CHD8Q9HCK8 2581 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 IGF1RP08069 1367 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 ZFHX4Q86UP3 3567 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 USP32Q8NFA0 1604 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 FMNL1O95466 1100 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-209ENST00000525132 Q3C1V9 767 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 SYMPKQ92797 1274 aaKnown RBP5.68□□□□□ -1.5
CSDE1-209ENST00000525132 SPSB2Q99619 263 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 RSPH6AQ9H0K4 717 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 RRAGCQ9HB90 399 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 PRDM9Q9NQV7 894 aa5.68□□□□□ -1.5
CSDE1-209ENST00000525132 CNTNAP1P78357 1384 aa5.67□□□□□ -1.5
CSDE1-209ENST00000525132 NKTRP30414 1462 aaKnown RBP5.67□□□□□ -1.5
CSDE1-209ENST00000525132 ZNF518AQ6AHZ1 1483 aa5.67□□□□□ -1.5
CSDE1-209ENST00000525132 CFAP99D6REC4 459 aa5.67□□□□□ -1.5
CSDE1-209ENST00000525132 GFRA3O60609 400 aa5.67□□□□□ -1.5
CSDE1-209ENST00000525132 DESI1Q6ICB0 168 aa5.67□□□□□ -1.5
CSDE1-209ENST00000525132 PROCA1Q8NCQ7 364 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-209ENST00000525132 USB1Q9BQ65 265 aaKnown RBP5.67□□□□□ -1.5
CSDE1-209ENST00000525132 C19orf44Q9H6X5 657 aa5.67□□□□□ -1.5
CSDE1-209ENST00000525132 NCOA2Q15596 1464 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 NLRP1Q9C000 1473 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-209ENST00000525132 RNF223E7ERA6 249 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 S1PR4O95977 384 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 MTMR2Q13614 643 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 PLA2G2CQ5R387 149 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 LCE2AQ5TA79 106 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-209ENST00000525132 PPP1R18Q6NYC8 613 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 IL27Q8NEV9 243 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 CABLES1Q8TDN4 633 aa5.66□□□□□ -1.5
CSDE1-209ENST00000525132 MIA2Q96PC5 1412 aa5.65□□□□□ -1.5
CSDE1-209ENST00000525132 LAMB4A4D0S4 1761 aa5.65□□□□□ -1.5
CSDE1-209ENST00000525132 SPDYE5A6NIY4 337 aa5.65□□□□□ -1.5
CSDE1-209ENST00000525132 RTL5Q5HYW3 569 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-209ENST00000525132 ZBTB3Q9H5J0 574 aa5.65□□□□□ -1.5
CSDE1-209ENST00000525132 MARF1Q9Y4F3 1742 aaKnown RBP5.65□□□□□ -1.51
CSDE1-209ENST00000525132 SETXQ7Z333 2677 aaKnown RBP5.64□□□□□ -1.51
CSDE1-209ENST00000525132 TRANK1O15050 2925 aa5.64□□□□□ -1.51
CSDE1-209ENST00000525132 JUNDP17535 347 aa5.64□□□□□ -1.51
CSDE1-209ENST00000525132 MAP2K1Q02750 393 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-209ENST00000525132 SLC15A2Q16348 729 aa5.64□□□□□ -1.51
CSDE1-209ENST00000525132 MAP3K11Q16584 847 aa5.64□□□□□ -1.51
CSDE1-209ENST00000525132 ANKLE1Q8NAG6 615 aa5.64□□□□□ -1.51
CSDE1-209ENST00000525132 SLC6A16Q9GZN6 736 aa5.64□□□□□ -1.51
CSDE1-209ENST00000525132 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.64□□□□□ -1.51
CSDE1-209ENST00000525132 POLR3EQ9NVU0 708 aa5.64□□□□□ -1.51
CSDE1-209ENST00000525132 TIMELESSQ9UNS1 1208 aa5.64□□□□□ -1.51
CSDE1-209ENST00000525132 ABCA3Q99758 1704 aa5.63□□□□□ -1.51
CSDE1-209ENST00000525132 F12P00748 615 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-209ENST00000525132 STK32BQ9NY57 414 aa5.63□□□□□ -1.51
CSDE1-209ENST00000525132 MYOM2P54296 1465 aa5.63□□□□□ -1.51
CSDE1-209ENST00000525132 MLH3Q9UHC1 1453 aa5.63□□□□□ -1.51
CSDE1-209ENST00000525132 LYPD8Q6UX82 237 aa5.62□□□□□ -1.51
CSDE1-209ENST00000525132 PRR7Q8TB68 274 aa5.62□□□□□ -1.51
CSDE1-209ENST00000525132 GTF3C3Q9Y5Q9 886 aa5.62□□□□□ -1.51
CSDE1-209ENST00000525132 PXDNLA1KZ92 1463 aa5.62□□□□□ -1.51
CSDE1-209ENST00000525132 GPATCH8Q9UKJ3 1502 aaKnown RBP5.62□□□□□ -1.51
CSDE1-209ENST00000525132 MUC3AQ02505 3323 aa5.62□□□□□ -1.51
CSDE1-209ENST00000525132 VIRMAQ69YN4 1812 aaKnown RBP5.62□□□□□ -1.51
CSDE1-209ENST00000525132 C6orf229H3BNL8 230 aa5.61□□□□□ -1.51
CSDE1-209ENST00000525132 GPR37L1O60883 481 aa5.61□□□□□ -1.51
CSDE1-209ENST00000525132 POLD1P28340 1107 aa5.61□□□□□ -1.51
CSDE1-209ENST00000525132 FOXK2Q01167 660 aa5.61□□□□□ -1.51
CSDE1-209ENST00000525132 PTPRNQ16849 979 aa5.61□□□□□ -1.51
CSDE1-209ENST00000525132 TMEM132AQ24JP5 1023 aa5.61□□□□□ -1.51
CSDE1-209ENST00000525132 TREML4Q6UXN2 200 aa5.61□□□□□ -1.51
CSDE1-209ENST00000525132 TRIOBPQ9H2D6 2365 aa5.61□□□□□ -1.51
CSDE1-209ENST00000525132 PIEZO1Q92508 2521 aa5.6□□□□□ -1.51
CSDE1-209ENST00000525132 UGGT2Q9NYU1 1516 aa5.6□□□□□ -1.51
CSDE1-209ENST00000525132 PER1O15534 1290 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-209ENST00000525132 RFC5P40937 340 aa5.6□□□□□ -1.51
CSDE1-209ENST00000525132 EID1Q9Y6B2 187 aa5.6□□□□□ -1.51
CSDE1-209ENST00000525132 NCOA3Q9Y6Q9 1424 aa5.59□□□□□ -1.51
CSDE1-209ENST00000525132 SOS2Q07890 1332 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-209ENST00000525132 NRG2O14511 850 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-209ENST00000525132 MRE11P49959 708 aa5.59□□□□□ -1.51
CSDE1-209ENST00000525132 CSPP1Q1MSJ5 1256 aa5.59□□□□□ -1.51
CSDE1-209ENST00000525132 LIAT1Q6ZQX7 453 aa5.59□□□□□ -1.51
CSDE1-209ENST00000525132 PMFBP1Q8TBY8 1022 aa5.59□□□□□ -1.51
CSDE1-209ENST00000525132 PCMTD1Q96MG8 357 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-209ENST00000525132 FCF1Q9Y324 198 aaKnown RBP5.59□□□□□ -1.51
CSDE1-209ENST00000525132 COL22A1Q8NFW1 1626 aaPredicted RBP5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms