RNA–Protein interactions for RNA: ENST00000524798.1

LTBP3-203, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-203ENST00000524798 N4BP2Q86UW6 1770 aaPredicted RBP26.23■■□□□ 1.79
LTBP3-203ENST00000524798 USPL1Q5W0Q7 1092 aa26.22■■□□□ 1.79
LTBP3-203ENST00000524798 ZNF790Q6PG37 636 aa26.22■■□□□ 1.79
LTBP3-203ENST00000524798 POLRMTO00411 1230 aaKnown RBP26.21■■□□□ 1.79
LTBP3-203ENST00000524798 KCNA3P22001 575 aa26.21■■□□□ 1.79
LTBP3-203ENST00000524798 ZNF496Q96IT1 587 aaPredicted RBP26.21■■□□□ 1.79
LTBP3-203ENST00000524798 COL15A1P39059 1388 aa26.2■■□□□ 1.79
LTBP3-203ENST00000524798 FCHSD2O94868 740 aa26.2■■□□□ 1.78
LTBP3-203ENST00000524798 STARD3NLO95772 234 aa26.2■■□□□ 1.78
LTBP3-203ENST00000524798 BCS1LQ9Y276 419 aa26.2■■□□□ 1.78
LTBP3-203ENST00000524798 SIPA1L3O60292 1781 aaPredicted RBP26.2■■□□□ 1.78
LTBP3-203ENST00000524798 TEX13AQ9BXU3 409 aaPredicted RBP26.19■■□□□ 1.78
LTBP3-203ENST00000524798 HEG1Q9ULI3 1381 aa26.19■■□□□ 1.78
LTBP3-203ENST00000524798 U2AF1L5P0DN76 240 aaPredicted RBP26.18■■□□□ 1.78
LTBP3-203ENST00000524798 U2AF1Q01081 240 aaKnown RBP eCLIP26.18■■□□□ 1.78
LTBP3-203ENST00000524798 BRCA1P38398 1863 aaKnown RBP26.17■■□□□ 1.78
LTBP3-203ENST00000524798 EIF5P55010 431 aaKnown RBP26.17■■□□□ 1.78
LTBP3-203ENST00000524798 BCL2L12Q9HB09 334 aa26.17■■□□□ 1.78
LTBP3-203ENST00000524798 CANXP27824 592 aaKnown RBP26.16■■□□□ 1.78
LTBP3-203ENST00000524798 NFIXQ14938 502 aa26.16■■□□□ 1.78
LTBP3-203ENST00000524798 GPBP1L1Q9HC44 474 aaPredicted RBP26.16■■□□□ 1.78
LTBP3-203ENST00000524798 PIM2Q9P1W9 311 aa26.16■■□□□ 1.78
LTBP3-203ENST00000524798 FMNL2Q96PY5 1086 aa26.15■■□□□ 1.78
LTBP3-203ENST00000524798 A0A087WZG4 1122 aa26.13■■□□□ 1.77
LTBP3-203ENST00000524798 BTBD11A6QL63 1104 aa26.12■■□□□ 1.77
LTBP3-203ENST00000524798 ARHGAP27Q6ZUM4 889 aa26.12■■□□□ 1.77
LTBP3-203ENST00000524798 SENP3-EIF4A1A0A087X0R7 540 aa26.11■■□□□ 1.77
LTBP3-203ENST00000524798 KCNQ3O43525 872 aa26.11■■□□□ 1.77
LTBP3-203ENST00000524798 HTATSF1O43719 755 aaKnown RBP26.11■■□□□ 1.77
LTBP3-203ENST00000524798 IL6STP40189 918 aaPredicted RBP26.1■■□□□ 1.77
LTBP3-203ENST00000524798 DALRD3Q5D0E6 543 aaKnown RBP26.1■■□□□ 1.77
LTBP3-203ENST00000524798 RTF1Q92541 710 aaKnown RBP26.1■■□□□ 1.77
LTBP3-203ENST00000524798 NRXN2Q9P2S2 1712 aa26.1■■□□□ 1.77
LTBP3-203ENST00000524798 ARFGEF1Q9Y6D6 1849 aa26.09■■□□□ 1.77
LTBP3-203ENST00000524798 SERPINB2P05120 415 aa26.09■■□□□ 1.77
LTBP3-203ENST00000524798 CHRNA5P30532 468 aa26.09■■□□□ 1.77
LTBP3-203ENST00000524798 ZNF526Q8TF50 670 aaPredicted RBP26.08■■□□□ 1.77
LTBP3-203ENST00000524798 AFDNP55196 1824 aaKnown RBP26.07■■□□□ 1.76
LTBP3-203ENST00000524798 A1BGP04217 495 aa26.07■■□□□ 1.76
LTBP3-203ENST00000524798 MCM10Q7L590 875 aa26.07■■□□□ 1.76
LTBP3-203ENST00000524798 TBC1D2BQ9UPU7 963 aa26.04■■□□□ 1.76
LTBP3-203ENST00000524798 USP16Q9Y5T5 823 aa26.04■■□□□ 1.76
LTBP3-203ENST00000524798 DCTN1Q14203 1278 aa26.03■■□□□ 1.76
LTBP3-203ENST00000524798 TBC1D9BQ66K14 1250 aa26.03■■□□□ 1.76
LTBP3-203ENST00000524798 KIF3CO14782 793 aa26.02■■□□□ 1.76
LTBP3-203ENST00000524798 SNRPA1P09661 255 aaKnown RBP26.02■■□□□ 1.76
LTBP3-203ENST00000524798 BICDL1Q6ZP65 573 aa26.01■■□□□ 1.75
LTBP3-203ENST00000524798 PLEKHF1Q96S99 279 aa26.01■■□□□ 1.75
LTBP3-203ENST00000524798 ZNF330Q9Y3S2 320 aaPredicted RBP26.01■■□□□ 1.75
LTBP3-203ENST00000524798 SCN7AQ01118 1682 aa26■■□□□ 1.75
LTBP3-203ENST00000524798 CAMTA2O94983 1202 aa26■■□□□ 1.75
LTBP3-203ENST00000524798 TAF7Q15545 349 aaPredicted RBP26■■□□□ 1.75
LTBP3-203ENST00000524798 C9orf131Q5VYM1 1079 aa26■■□□□ 1.75
LTBP3-203ENST00000524798 NPM2Q86SE8 214 aaKnown RBP26■■□□□ 1.75
LTBP3-203ENST00000524798 PRAMEF22A3QJZ6 481 aa25.99■■□□□ 1.75
LTBP3-203ENST00000524798 NEFMP07197 916 aa25.99■■□□□ 1.75
LTBP3-203ENST00000524798 CARMIL3Q8ND23 1372 aa25.98■■□□□ 1.75
LTBP3-203ENST00000524798 H0YIN7 160 aa25.97■■□□□ 1.75
LTBP3-203ENST00000524798 DZIP3Q86Y13 1208 aaKnown RBP25.97■■□□□ 1.75
LTBP3-203ENST00000524798 C2CD5Q86YS7 1000 aa25.97■■□□□ 1.75
LTBP3-203ENST00000524798 TTLL6Q8N841 843 aa25.97■■□□□ 1.75
LTBP3-203ENST00000524798 BRIP1Q9BX63 1249 aa25.97■■□□□ 1.75
LTBP3-203ENST00000524798 PDZRN3Q9UPQ7 1066 aa25.97■■□□□ 1.75
LTBP3-203ENST00000524798 DLEC1Q9Y238 1755 aa25.97■■□□□ 1.75
LTBP3-203ENST00000524798 PRR5LQ6MZQ0 368 aa25.95■■□□□ 1.74
LTBP3-203ENST00000524798 SETDB2Q96T68 719 aa25.95■■□□□ 1.74
LTBP3-203ENST00000524798 PNNQ9H307 717 aaKnown RBP25.95■■□□□ 1.74
LTBP3-203ENST00000524798 RALBP1Q15311 655 aa25.94■■□□□ 1.74
LTBP3-203ENST00000524798 NFE2L2Q16236 605 aa25.94■■□□□ 1.74
LTBP3-203ENST00000524798 CLEC4GQ6UXB4 293 aa25.94■■□□□ 1.74
LTBP3-203ENST00000524798 PNISRQ8TF01 805 aaKnown RBP25.94■■□□□ 1.74
LTBP3-203ENST00000524798 NBPF26B4DH59 902 aa25.93■■□□□ 1.74
LTBP3-203ENST00000524798 RGL2O15211 777 aa25.93■■□□□ 1.74
LTBP3-203ENST00000524798 PDE6BP35913 854 aa25.93■■□□□ 1.74
LTBP3-203ENST00000524798 PIP4K2AP48426 406 aaPredicted RBP25.93■■□□□ 1.74
LTBP3-203ENST00000524798 NBPF10Q6P3W6 841 aaKnown RBP25.93■■□□□ 1.74
LTBP3-203ENST00000524798 NBPF15Q8N660 670 aa25.93■■□□□ 1.74
LTBP3-203ENST00000524798 RNF181Q9P0P0 153 aa25.93■■□□□ 1.74
LTBP3-203ENST00000524798 HSPA6P17066 643 aa25.92■■□□□ 1.74
LTBP3-203ENST00000524798 MIS18AQ9NYP9 233 aa25.92■■□□□ 1.74
LTBP3-203ENST00000524798 DLG5Q8TDM6 1919 aa25.92■■□□□ 1.74
LTBP3-203ENST00000524798 SBF1O95248 1867 aa25.91■■□□□ 1.74
LTBP3-203ENST00000524798 ANKRD31Q8N7Z5 1873 aa25.91■■□□□ 1.74
LTBP3-203ENST00000524798 BCORQ6W2J9 1755 aa25.91■■□□□ 1.74
LTBP3-203ENST00000524798 CNBD1Q8NA66 436 aa25.9■■□□□ 1.74
LTBP3-203ENST00000524798 NMRK2Q9NPI5 230 aa25.9■■□□□ 1.74
LTBP3-203ENST00000524798 TOMM70O94826 608 aa25.89■■□□□ 1.74
LTBP3-203ENST00000524798 ZNF652Q9Y2D9 606 aa25.89■■□□□ 1.74
LTBP3-203ENST00000524798 CCDC24Q8N4L8 307 aa25.88■■□□□ 1.73
LTBP3-203ENST00000524798 ZC3H4Q9UPT8 1303 aaKnown RBP25.88■■□□□ 1.73
LTBP3-203ENST00000524798 LMNB1P20700 586 aa25.87■■□□□ 1.73
LTBP3-203ENST00000524798 RASSF7Q02833 373 aa25.87■■□□□ 1.73
LTBP3-203ENST00000524798 KDM3BQ7LBC6 1761 aa25.87■■□□□ 1.73
LTBP3-203ENST00000524798 KDM2BQ8NHM5 1336 aa25.87■■□□□ 1.73
LTBP3-203ENST00000524798 MAPK8IP3Q9UPT6 1336 aa25.87■■□□□ 1.73
LTBP3-203ENST00000524798 PRELPP51888 382 aa25.86■■□□□ 1.73
LTBP3-203ENST00000524798 EIF4A1P60842 406 aaKnown RBP25.86■■□□□ 1.73
LTBP3-203ENST00000524798 ST5P78524 1137 aa25.86■■□□□ 1.73
LTBP3-203ENST00000524798 ZNF622Q969S3 477 aaKnown RBP eCLIP25.86■■□□□ 1.73
LTBP3-203ENST00000524798 DDX10Q13206 875 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms