RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 MMP10P09238 476 aa16.85■□□□□ 0.29
HDAC2-217ENST00000524334 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
HDAC2-217ENST00000524334 MIS18AQ9NYP9 233 aa16.85■□□□□ 0.29
HDAC2-217ENST00000524334 USP42Q9H9J4 1324 aaKnown RBP16.85■□□□□ 0.29
HDAC2-217ENST00000524334 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
HDAC2-217ENST00000524334 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
HDAC2-217ENST00000524334 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
HDAC2-217ENST00000524334 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
HDAC2-217ENST00000524334 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
HDAC2-217ENST00000524334 NARFQ9UHQ1 456 aa16.84■□□□□ 0.29
HDAC2-217ENST00000524334 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
HDAC2-217ENST00000524334 RRP7AQ9Y3A4 280 aaKnown RBP16.83■□□□□ 0.28
HDAC2-217ENST00000524334 USP16Q9Y5T5 823 aa16.83■□□□□ 0.28
HDAC2-217ENST00000524334 PARP3Q9Y6F1 533 aa16.83■□□□□ 0.28
HDAC2-217ENST00000524334 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
HDAC2-217ENST00000524334 A1BGP04217 495 aa16.82■□□□□ 0.28
HDAC2-217ENST00000524334 UBR3Q6ZT12 1888 aa16.82■□□□□ 0.28
HDAC2-217ENST00000524334 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
HDAC2-217ENST00000524334 COL15A1P39059 1388 aa16.81■□□□□ 0.28
HDAC2-217ENST00000524334 EIF4A1P60842 406 aaKnown RBP16.81■□□□□ 0.28
HDAC2-217ENST00000524334 FKBP8Q14318 412 aa16.81■□□□□ 0.28
HDAC2-217ENST00000524334 USPL1Q5W0Q7 1092 aa16.81■□□□□ 0.28
HDAC2-217ENST00000524334 TSPYL4Q9UJ04 414 aa16.81■□□□□ 0.28
HDAC2-217ENST00000524334 TJP1Q07157 1748 aa16.81■□□□□ 0.28
HDAC2-217ENST00000524334 COL24A1Q17RW2 1714 aa16.81■□□□□ 0.28
HDAC2-217ENST00000524334 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
HDAC2-217ENST00000524334 TM4SF1P30408 202 aa16.8■□□□□ 0.28
HDAC2-217ENST00000524334 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
HDAC2-217ENST00000524334 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
HDAC2-217ENST00000524334 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
HDAC2-217ENST00000524334 APAF1O14727 1248 aa16.79■□□□□ 0.28
HDAC2-217ENST00000524334 GPR162Q16538 588 aa16.79■□□□□ 0.28
HDAC2-217ENST00000524334 CCDC184Q52MB2 194 aa16.79■□□□□ 0.28
HDAC2-217ENST00000524334 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
HDAC2-217ENST00000524334 CALD1Q05682 793 aaKnown RBP16.78■□□□□ 0.28
HDAC2-217ENST00000524334 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
HDAC2-217ENST00000524334 UBR2Q8IWV8 1755 aa16.78■□□□□ 0.28
HDAC2-217ENST00000524334 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.28
HDAC2-217ENST00000524334 CHL1O00533 1208 aa16.77■□□□□ 0.28
HDAC2-217ENST00000524334 TGFB2P61812 414 aa16.77■□□□□ 0.28
HDAC2-217ENST00000524334 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
HDAC2-217ENST00000524334 GRIN3BO60391 1043 aa16.75■□□□□ 0.27
HDAC2-217ENST00000524334 NFIXQ14938 502 aa16.75■□□□□ 0.27
HDAC2-217ENST00000524334 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
HDAC2-217ENST00000524334 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
HDAC2-217ENST00000524334 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
HDAC2-217ENST00000524334 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
HDAC2-217ENST00000524334 POLRMTO00411 1230 aaKnown RBP16.74■□□□□ 0.27
HDAC2-217ENST00000524334 RGL2O15211 777 aa16.74■□□□□ 0.27
HDAC2-217ENST00000524334 DDR1Q08345 913 aa16.74■□□□□ 0.27
HDAC2-217ENST00000524334 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
HDAC2-217ENST00000524334 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
HDAC2-217ENST00000524334 CFAP44Q96MT7 982 aa16.74■□□□□ 0.27
HDAC2-217ENST00000524334 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
HDAC2-217ENST00000524334 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
HDAC2-217ENST00000524334 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
HDAC2-217ENST00000524334 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
HDAC2-217ENST00000524334 ERBB4Q15303 1308 aa16.72■□□□□ 0.27
HDAC2-217ENST00000524334 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
HDAC2-217ENST00000524334 SERPINB2P05120 415 aa16.72■□□□□ 0.27
HDAC2-217ENST00000524334 PIP4K2AP48426 406 aaPredicted RBP16.72■□□□□ 0.27
HDAC2-217ENST00000524334 ZNF652Q9Y2D9 606 aa16.72■□□□□ 0.27
HDAC2-217ENST00000524334 GNAI1P63096 354 aa16.71■□□□□ 0.27
HDAC2-217ENST00000524334 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
HDAC2-217ENST00000524334 SETDB2Q96T68 719 aa16.71■□□□□ 0.27
HDAC2-217ENST00000524334 C10orf71Q711Q0 1435 aa16.7■□□□□ 0.26
HDAC2-217ENST00000524334 VIRMAQ69YN4 1812 aaKnown RBP16.7■□□□□ 0.26
HDAC2-217ENST00000524334 A0A0G2JLW4 131 aa16.7■□□□□ 0.26
HDAC2-217ENST00000524334 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
HDAC2-217ENST00000524334 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
HDAC2-217ENST00000524334 IFT57Q9NWB7 429 aa16.7■□□□□ 0.26
HDAC2-217ENST00000524334 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
HDAC2-217ENST00000524334 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDAC2-217ENST00000524334 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
HDAC2-217ENST00000524334 YY1P25490 414 aa16.69■□□□□ 0.26
HDAC2-217ENST00000524334 ERVV-1B6SEH8 477 aa16.68■□□□□ 0.26
HDAC2-217ENST00000524334 HOXB7P09629 217 aa16.68■□□□□ 0.26
HDAC2-217ENST00000524334 MYL6BP14649 208 aa16.68■□□□□ 0.26
HDAC2-217ENST00000524334 DPEP1P16444 411 aa16.68■□□□□ 0.26
HDAC2-217ENST00000524334 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
HDAC2-217ENST00000524334 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
HDAC2-217ENST00000524334 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
HDAC2-217ENST00000524334 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
HDAC2-217ENST00000524334 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
HDAC2-217ENST00000524334 PIM2Q9P1W9 311 aa16.67■□□□□ 0.26
HDAC2-217ENST00000524334 C4AP0C0L4 1744 aa16.67■□□□□ 0.26
HDAC2-217ENST00000524334 KCNA3P22001 575 aa16.66■□□□□ 0.26
HDAC2-217ENST00000524334 WWC1Q8IX03 1113 aa16.66■□□□□ 0.26
HDAC2-217ENST00000524334 BRIP1Q9BX63 1249 aa16.66■□□□□ 0.26
HDAC2-217ENST00000524334 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
HDAC2-217ENST00000524334 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
HDAC2-217ENST00000524334 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
HDAC2-217ENST00000524334 NPHP1O15259 732 aa16.65■□□□□ 0.26
HDAC2-217ENST00000524334 PDIA6Q15084 440 aa16.65■□□□□ 0.26
HDAC2-217ENST00000524334 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
HDAC2-217ENST00000524334 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
HDAC2-217ENST00000524334 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
HDAC2-217ENST00000524334 H0YIN7 160 aa16.64■□□□□ 0.25
HDAC2-217ENST00000524334 PDE6BP35913 854 aa16.64■□□□□ 0.25
HDAC2-217ENST00000524334 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms