RNA–Protein interactions for RNA: ENST00000524089.1

CDH15-203, Transcript of cadherin 15, humanhuman

TSL 2

Gene CDH15, Length 1,587 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15-203ENST00000524089 KCNQ2O43526 872 aa20.95■□□□□ 0.94
CDH15-203ENST00000524089 IGHDP01880 384 aa20.95■□□□□ 0.94
CDH15-203ENST00000524089 ZKSCAN2Q63HK3 967 aa20.95■□□□□ 0.94
CDH15-203ENST00000524089 PANK1Q8TE04 598 aa20.95■□□□□ 0.94
CDH15-203ENST00000524089 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
CDH15-203ENST00000524089 ASAP1Q9ULH1 1129 aa20.95■□□□□ 0.94
CDH15-203ENST00000524089 LY75O60449 1722 aa20.95■□□□□ 0.94
CDH15-203ENST00000524089 TJP1Q07157 1748 aa20.95■□□□□ 0.94
CDH15-203ENST00000524089 CICQ96RK0 1608 aaPredicted RBP20.95■□□□□ 0.94
CDH15-203ENST00000524089 HOXB7P09629 217 aa20.94■□□□□ 0.94
CDH15-203ENST00000524089 ZNF831Q5JPB2 1677 aa20.94■□□□□ 0.94
CDH15-203ENST00000524089 GIGYF1O75420 1035 aaPredicted RBP20.93■□□□□ 0.94
CDH15-203ENST00000524089 ALDH1L2Q3SY69 923 aa20.93■□□□□ 0.94
CDH15-203ENST00000524089 RWDD1Q9H446 243 aaPredicted RBP20.93■□□□□ 0.94
CDH15-203ENST00000524089 FAM196AQ6ZSG2 479 aa20.93■□□□□ 0.94
CDH15-203ENST00000524089 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
CDH15-203ENST00000524089 SSH1Q8WYL5 1049 aa20.93■□□□□ 0.94
CDH15-203ENST00000524089 BCL2L13Q9BXK5 485 aa20.93■□□□□ 0.94
CDH15-203ENST00000524089 MVPQ14764 893 aaKnown RBP20.92■□□□□ 0.94
CDH15-203ENST00000524089 FRAT1Q92837 279 aaPredicted RBP20.92■□□□□ 0.94
CDH15-203ENST00000524089 SMC4Q9NTJ3 1288 aa20.92■□□□□ 0.94
CDH15-203ENST00000524089 PTCD1O75127 700 aaKnown RBP20.91■□□□□ 0.94
CDH15-203ENST00000524089 RGS3P49796 1198 aa20.91■□□□□ 0.94
CDH15-203ENST00000524089 DAXXQ9UER7 740 aaPredicted RBP20.91■□□□□ 0.94
CDH15-203ENST00000524089 COL5A3P25940 1745 aaPredicted RBP20.91■□□□□ 0.94
CDH15-203ENST00000524089 SNRPA1P09661 255 aaKnown RBP20.9■□□□□ 0.94
CDH15-203ENST00000524089 TNS1Q9HBL0 1735 aaKnown RBP20.89■□□□□ 0.94
CDH15-203ENST00000524089 PRAMEF22A3QJZ6 481 aa20.89■□□□□ 0.94
CDH15-203ENST00000524089 HDGFL1Q5TGJ6 251 aa20.89■□□□□ 0.94
CDH15-203ENST00000524089 TAF1LQ8IZX4 1826 aa20.89■□□□□ 0.93
CDH15-203ENST00000524089 CCDC30Q5VVM6 783 aa20.89■□□□□ 0.93
CDH15-203ENST00000524089 PTF1AQ7RTS3 328 aa20.89■□□□□ 0.93
CDH15-203ENST00000524089 CHMP4AQ9BY43 222 aa20.89■□□□□ 0.93
CDH15-203ENST00000524089 PALLDQ8WX93 1383 aa20.88■□□□□ 0.93
CDH15-203ENST00000524089 EIF2S2P20042 333 aaKnown RBP20.88■□□□□ 0.93
CDH15-203ENST00000524089 DZIP1LQ8IYY4 767 aaKnown RBP20.88■□□□□ 0.93
CDH15-203ENST00000524089 SMARCC1Q92922 1105 aaPredicted RBP20.88■□□□□ 0.93
CDH15-203ENST00000524089 BCL11AQ9H165 835 aa20.88■□□□□ 0.93
CDH15-203ENST00000524089 BRPF1P55201 1214 aaPredicted RBP20.87■□□□□ 0.93
CDH15-203ENST00000524089 NECTIN2Q92692 538 aa20.87■□□□□ 0.93
CDH15-203ENST00000524089 RBM42Q9BTD8 480 aaKnown RBP20.87■□□□□ 0.93
CDH15-203ENST00000524089 KIF16BQ96L93 1317 aa20.87■□□□□ 0.93
CDH15-203ENST00000524089 RLBP1P12271 317 aa20.86■□□□□ 0.93
CDH15-203ENST00000524089 VSIG10Q8N0Z9 540 aa20.86■□□□□ 0.93
CDH15-203ENST00000524089 MRPL50Q8N5N7 158 aaKnown RBP20.86■□□□□ 0.93
CDH15-203ENST00000524089 STK31Q9BXU1 1019 aa20.86■□□□□ 0.93
CDH15-203ENST00000524089 BCL11BQ9C0K0 894 aaPredicted RBP20.86■□□□□ 0.93
CDH15-203ENST00000524089 SOCS7O14512 581 aa20.85■□□□□ 0.93
CDH15-203ENST00000524089 DDX19BQ9UMR2 479 aa20.85■□□□□ 0.93
CDH15-203ENST00000524089 MYH14Q7Z406 1995 aaKnown RBP20.85■□□□□ 0.93
CDH15-203ENST00000524089 IPO8O15397 1037 aaKnown RBP20.85■□□□□ 0.93
CDH15-203ENST00000524089 HDAC1Q13547 482 aaPredicted RBP20.85■□□□□ 0.93
CDH15-203ENST00000524089 FTSJ3Q8IY81 847 aaKnown RBP20.85■□□□□ 0.93
CDH15-203ENST00000524089 PCDHB15Q9Y5E8 787 aa20.85■□□□□ 0.93
CDH15-203ENST00000524089 USP16Q9Y5T5 823 aa20.84■□□□□ 0.93
CDH15-203ENST00000524089 N4BP2Q86UW6 1770 aaPredicted RBP20.83■□□□□ 0.93
CDH15-203ENST00000524089 RREB1Q92766 1687 aa20.83■□□□□ 0.93
CDH15-203ENST00000524089 TRIM37O94972 964 aa20.83■□□□□ 0.92
CDH15-203ENST00000524089 SLC4A2P04920 1241 aa20.83■□□□□ 0.92
CDH15-203ENST00000524089 SLC4A9Q96Q91 983 aa20.83■□□□□ 0.92
CDH15-203ENST00000524089 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.92
CDH15-203ENST00000524089 RGPD3A6NKT7 1758 aaPredicted RBP20.83■□□□□ 0.92
CDH15-203ENST00000524089 RGPD4Q7Z3J3 1758 aa20.83■□□□□ 0.92
CDH15-203ENST00000524089 LOC102724428A0A0B4J2F2 783 aa20.82■□□□□ 0.92
CDH15-203ENST00000524089 SIK1P57059 783 aa20.82■□□□□ 0.92
CDH15-203ENST00000524089 TEX13AQ9BXU3 409 aaPredicted RBP20.82■□□□□ 0.92
CDH15-203ENST00000524089 DBF4Q9UBU7 674 aaPredicted RBP20.82■□□□□ 0.92
CDH15-203ENST00000524089 ATF7IPQ6VMQ6 1270 aa20.81■□□□□ 0.92
CDH15-203ENST00000524089 DNAJC10Q8IXB1 793 aa20.81■□□□□ 0.92
CDH15-203ENST00000524089 CHMP4BQ9H444 224 aaKnown RBP20.81■□□□□ 0.92
CDH15-203ENST00000524089 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
CDH15-203ENST00000524089 ERBB4Q15303 1308 aa20.8■□□□□ 0.92
CDH15-203ENST00000524089 ATP6V1AP38606 617 aa20.79■□□□□ 0.92
CDH15-203ENST00000524089 BECN1Q14457 450 aa20.79■□□□□ 0.92
CDH15-203ENST00000524089 UPF2Q9HAU5 1272 aaKnown RBP20.79■□□□□ 0.92
CDH15-203ENST00000524089 DDX21Q9NR30 783 aaKnown RBP eCLIP20.79■□□□□ 0.92
CDH15-203ENST00000524089 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
CDH15-203ENST00000524089 ARFGEF2Q9Y6D5 1785 aa20.78■□□□□ 0.92
CDH15-203ENST00000524089 STARD3NLO95772 234 aa20.78■□□□□ 0.92
CDH15-203ENST00000524089 TRIM27P14373 513 aa20.78■□□□□ 0.92
CDH15-203ENST00000524089 PTPRCP08575 1304 aa20.78■□□□□ 0.92
CDH15-203ENST00000524089 ANXA1P04083 346 aa20.77■□□□□ 0.92
CDH15-203ENST00000524089 PDIA6Q15084 440 aa20.77■□□□□ 0.92
CDH15-203ENST00000524089 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
CDH15-203ENST00000524089 G2E3Q7L622 706 aa20.77■□□□□ 0.92
CDH15-203ENST00000524089 ARHGAP45Q92619 1136 aa20.77■□□□□ 0.92
CDH15-203ENST00000524089 NUP188Q5SRE5 1749 aa20.77■□□□□ 0.92
CDH15-203ENST00000524089 CYP19A1P11511 503 aaPredicted RBP20.76■□□□□ 0.91
CDH15-203ENST00000524089 FLIIQ13045 1269 aa20.76■□□□□ 0.91
CDH15-203ENST00000524089 HYPKQ9NX55 129 aa20.76■□□□□ 0.91
CDH15-203ENST00000524089 C4BP0C0L5 1744 aa20.76■□□□□ 0.91
CDH15-203ENST00000524089 ITPK1Q13572 414 aa20.76■□□□□ 0.91
CDH15-203ENST00000524089 A1BGP04217 495 aa20.75■□□□□ 0.91
CDH15-203ENST00000524089 MYL6BP14649 208 aa20.75■□□□□ 0.91
CDH15-203ENST00000524089 PHAXQ9H814 394 aaKnown RBP20.75■□□□□ 0.91
CDH15-203ENST00000524089 TNNQ9UQP3 1299 aa20.75■□□□□ 0.91
CDH15-203ENST00000524089 NBPF26B4DH59 902 aa20.74■□□□□ 0.91
CDH15-203ENST00000524089 PIP4K2AP48426 406 aaPredicted RBP20.74■□□□□ 0.91
CDH15-203ENST00000524089 NBPF14Q5TI25 921 aa20.74■□□□□ 0.91
CDH15-203ENST00000524089 NBPF10Q6P3W6 841 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms