RNA–Protein interactions for RNA: ENST00000523720.1

R3HCC1-209, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-209ENST00000523720 YBX3P16989 372 aaKnown RBP eCLIP15.71■□□□□ 0.11
R3HCC1-209ENST00000523720 RALBP1Q15311 655 aa15.71■□□□□ 0.11
R3HCC1-209ENST00000523720 ZNF790Q6PG37 636 aa15.71■□□□□ 0.11
R3HCC1-209ENST00000523720 PARP3Q9Y6F1 533 aa15.71■□□□□ 0.11
R3HCC1-209ENST00000523720 DLEC1Q9Y238 1755 aa15.71■□□□□ 0.11
R3HCC1-209ENST00000523720 ZPR1O75312 459 aa15.7■□□□□ 0.1
R3HCC1-209ENST00000523720 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
R3HCC1-209ENST00000523720 ZBTB1Q9Y2K1 713 aa15.7■□□□□ 0.1
R3HCC1-209ENST00000523720 ZNF496Q96IT1 587 aaPredicted RBP15.69■□□□□ 0.1
R3HCC1-209ENST00000523720 TEX13AQ9BXU3 409 aaPredicted RBP15.69■□□□□ 0.1
R3HCC1-209ENST00000523720 SRP68Q9UHB9 627 aaKnown RBP15.69■□□□□ 0.1
R3HCC1-209ENST00000523720 MAPK8IP3Q9UPT6 1336 aa15.68■□□□□ 0.1
R3HCC1-209ENST00000523720 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
R3HCC1-209ENST00000523720 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
R3HCC1-209ENST00000523720 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
R3HCC1-209ENST00000523720 PNNQ9H307 717 aaKnown RBP15.68■□□□□ 0.1
R3HCC1-209ENST00000523720 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
R3HCC1-209ENST00000523720 FKBP8Q14318 412 aa15.67■□□□□ 0.1
R3HCC1-209ENST00000523720 MCM10Q7L590 875 aa15.67■□□□□ 0.1
R3HCC1-209ENST00000523720 UTRNP46939 3433 aa15.67■□□□□ 0.1
R3HCC1-209ENST00000523720 MYBBP1AQ9BQG0 1328 aaKnown RBP15.67■□□□□ 0.1
R3HCC1-209ENST00000523720 A0A087WZG4 1122 aa15.66■□□□□ 0.1
R3HCC1-209ENST00000523720 TGFB2P61812 414 aa15.66■□□□□ 0.1
R3HCC1-209ENST00000523720 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
R3HCC1-209ENST00000523720 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
R3HCC1-209ENST00000523720 ZNF784Q8NCA9 323 aaPredicted RBP15.66■□□□□ 0.1
R3HCC1-209ENST00000523720 NARFQ9UHQ1 456 aa15.66■□□□□ 0.1
R3HCC1-209ENST00000523720 CANXP27824 592 aaKnown RBP15.65■□□□□ 0.1
R3HCC1-209ENST00000523720 DDR1Q08345 913 aa15.64■□□□□ 0.09
R3HCC1-209ENST00000523720 NPM2Q86SE8 214 aaKnown RBP15.64■□□□□ 0.09
R3HCC1-209ENST00000523720 WWC3Q9ULE0 1092 aa15.64■□□□□ 0.09
R3HCC1-209ENST00000523720 GOLGB1Q14789 3259 aaKnown RBP15.64■□□□□ 0.09
R3HCC1-209ENST00000523720 POLRMTO00411 1230 aaKnown RBP15.63■□□□□ 0.09
R3HCC1-209ENST00000523720 PLEKHF1Q96S99 279 aa15.63■□□□□ 0.09
R3HCC1-209ENST00000523720 IL6STP40189 918 aaPredicted RBP15.62■□□□□ 0.09
R3HCC1-209ENST00000523720 EIF5P55010 431 aaKnown RBP15.62■□□□□ 0.09
R3HCC1-209ENST00000523720 DCTN1Q14203 1278 aa15.62■□□□□ 0.09
R3HCC1-209ENST00000523720 NFE2L2Q16236 605 aa15.62■□□□□ 0.09
R3HCC1-209ENST00000523720 ZNF330Q9Y3S2 320 aaPredicted RBP15.62■□□□□ 0.09
R3HCC1-209ENST00000523720 ANKRD31Q8N7Z5 1873 aa15.62■□□□□ 0.09
R3HCC1-209ENST00000523720 COL11A2P13942 1736 aaPredicted RBP15.61■□□□□ 0.09
R3HCC1-209ENST00000523720 KCNQ3O43525 872 aa15.61■□□□□ 0.09
R3HCC1-209ENST00000523720 SNRPA1P09661 255 aaKnown RBP15.61■□□□□ 0.09
R3HCC1-209ENST00000523720 PNISRQ8TF01 805 aaKnown RBP15.61■□□□□ 0.09
R3HCC1-209ENST00000523720 ADCY9O60503 1353 aa15.61■□□□□ 0.09
R3HCC1-209ENST00000523720 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
R3HCC1-209ENST00000523720 DPEP1P16444 411 aa15.6■□□□□ 0.09
R3HCC1-209ENST00000523720 TM4SF1P30408 202 aa15.6■□□□□ 0.09
R3HCC1-209ENST00000523720 NFIXQ14938 502 aa15.6■□□□□ 0.09
R3HCC1-209ENST00000523720 TAF7Q15545 349 aaPredicted RBP15.6■□□□□ 0.09
R3HCC1-209ENST00000523720 CACNA1SQ13698 1873 aa15.6■□□□□ 0.09
R3HCC1-209ENST00000523720 CARMIL3Q8ND23 1372 aa15.6■□□□□ 0.09
R3HCC1-209ENST00000523720 ARFGEF2Q9Y6D5 1785 aa15.59■□□□□ 0.09
R3HCC1-209ENST00000523720 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
R3HCC1-209ENST00000523720 BCS1LQ9Y276 419 aa15.59■□□□□ 0.09
R3HCC1-209ENST00000523720 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.08
R3HCC1-209ENST00000523720 WDR43Q15061 677 aaKnown RBP eCLIP15.58■□□□□ 0.08
R3HCC1-209ENST00000523720 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.08
R3HCC1-209ENST00000523720 A1BGP04217 495 aa15.57■□□□□ 0.08
R3HCC1-209ENST00000523720 SERPINB2P05120 415 aa15.56■□□□□ 0.08
R3HCC1-209ENST00000523720 BICDL1Q6ZP65 573 aa15.56■□□□□ 0.08
R3HCC1-209ENST00000523720 DZIP3Q86Y13 1208 aaKnown RBP15.56■□□□□ 0.08
R3HCC1-209ENST00000523720 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
R3HCC1-209ENST00000523720 TBC1D2BQ9UPU7 963 aa15.56■□□□□ 0.08
R3HCC1-209ENST00000523720 NUP98P52948 1817 aa15.56■□□□□ 0.08
R3HCC1-209ENST00000523720 SBF1O95248 1867 aa15.55■□□□□ 0.08
R3HCC1-209ENST00000523720 TIAM2Q8IVF5 1701 aa15.55■□□□□ 0.08
R3HCC1-209ENST00000523720 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
R3HCC1-209ENST00000523720 GIGYF1O75420 1035 aaPredicted RBP15.55■□□□□ 0.08
R3HCC1-209ENST00000523720 DALRD3Q5D0E6 543 aaKnown RBP15.55■□□□□ 0.08
R3HCC1-209ENST00000523720 THUMPD2Q9BTF0 503 aaKnown RBP15.55■□□□□ 0.08
R3HCC1-209ENST00000523720 ZNF652Q9Y2D9 606 aa15.55■□□□□ 0.08
R3HCC1-209ENST00000523720 USP16Q9Y5T5 823 aa15.55■□□□□ 0.08
R3HCC1-209ENST00000523720 CAMTA2O94983 1202 aa15.54■□□□□ 0.08
R3HCC1-209ENST00000523720 CHRNA5P30532 468 aa15.54■□□□□ 0.08
R3HCC1-209ENST00000523720 TBC1D9BQ66K14 1250 aa15.54■□□□□ 0.08
R3HCC1-209ENST00000523720 PRKRIP1Q9H875 184 aaPredicted RBP15.54■□□□□ 0.08
R3HCC1-209ENST00000523720 RGL2O15211 777 aa15.53■□□□□ 0.08
R3HCC1-209ENST00000523720 NPHP1O15259 732 aa15.53■□□□□ 0.08
R3HCC1-209ENST00000523720 KCNA3P22001 575 aa15.53■□□□□ 0.08
R3HCC1-209ENST00000523720 PIP4K2AP48426 406 aaPredicted RBP15.53■□□□□ 0.08
R3HCC1-209ENST00000523720 RIPK4P57078 832 aa15.53■□□□□ 0.08
R3HCC1-209ENST00000523720 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
R3HCC1-209ENST00000523720 ANKRD36CQ5JPF3 1778 aa15.53■□□□□ 0.08
R3HCC1-209ENST00000523720 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.08
R3HCC1-209ENST00000523720 CNBD1Q8NA66 436 aa15.52■□□□□ 0.08
R3HCC1-209ENST00000523720 SETDB2Q96T68 719 aa15.52■□□□□ 0.08
R3HCC1-209ENST00000523720 TSPYL4Q9UJ04 414 aa15.52■□□□□ 0.08
R3HCC1-209ENST00000523720 CCDC88AQ3V6T2 1871 aa15.52■□□□□ 0.07
R3HCC1-209ENST00000523720 TNRC6CQ9HCJ0 1690 aaKnown RBP15.51■□□□□ 0.07
R3HCC1-209ENST00000523720 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
R3HCC1-209ENST00000523720 ST5P78524 1137 aa15.51■□□□□ 0.07
R3HCC1-209ENST00000523720 ARHGAP27Q6ZUM4 889 aa15.51■□□□□ 0.07
R3HCC1-209ENST00000523720 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
R3HCC1-209ENST00000523720 RUNDC1Q96C34 613 aa15.51■□□□□ 0.07
R3HCC1-209ENST00000523720 GPBP1L1Q9HC44 474 aaPredicted RBP15.51■□□□□ 0.07
R3HCC1-209ENST00000523720 PDZRN3Q9UPQ7 1066 aa15.51■□□□□ 0.07
R3HCC1-209ENST00000523720 ERBB4Q15303 1308 aa15.5■□□□□ 0.07
R3HCC1-209ENST00000523720 NBPF26B4DH59 902 aa15.5■□□□□ 0.07
R3HCC1-209ENST00000523720 PRR5LQ6MZQ0 368 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms