RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 PLCH1Q4KWH8 1693 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 CDC42BPGQ6DT37 1551 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 SBNO1A3KN83 1393 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 TESPA1A2RU30 521 aaPredicted RBP5.72□□□□□ -1.49
NPM1-210ENST00000523339 FAM187AA6NFU0 413 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 GRIN3BO60391 1043 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 SLC4A3P48751 1232 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 FOXC1Q12948 553 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 SAFB2Q14151 953 aaKnown RBP eCLIP5.72□□□□□ -1.49
NPM1-210ENST00000523339 CHRNA2Q15822 529 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 PKDCCQ504Y2 493 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 MORN1Q5T089 497 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 LCE2AQ5TA79 106 aaPredicted RBP5.72□□□□□ -1.49
NPM1-210ENST00000523339 SPSB2Q99619 263 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 PDGFDQ9GZP0 370 aaPredicted RBP5.72□□□□□ -1.49
NPM1-210ENST00000523339 NRXN3Q9Y4C0 1643 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 DLC1Q96QB1 1528 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 VPS8Q8N3P4 1428 aa5.72□□□□□ -1.49
NPM1-210ENST00000523339 NWD2Q9ULI1 1742 aa5.71□□□□□ -1.49
NPM1-210ENST00000523339 NR1I2O75469 434 aa5.71□□□□□ -1.5
NPM1-210ENST00000523339 OATP04181 439 aa5.71□□□□□ -1.5
NPM1-210ENST00000523339 ZC3H6P61129 1189 aaKnown RBP5.71□□□□□ -1.5
NPM1-210ENST00000523339 TCP11L2Q8N4U5 519 aa5.71□□□□□ -1.5
NPM1-210ENST00000523339 NGDNQ8NEJ9 315 aaKnown RBP5.71□□□□□ -1.5
NPM1-210ENST00000523339 POGKQ9P215 609 aa5.71□□□□□ -1.5
NPM1-210ENST00000523339 RRBP1Q9P2E9 1410 aaKnown RBP5.71□□□□□ -1.5
NPM1-210ENST00000523339 IQGAP3Q86VI3 1631 aa5.7□□□□□ -1.5
NPM1-210ENST00000523339 FUT2Q10981 343 aa5.7□□□□□ -1.5
NPM1-210ENST00000523339 HIC1Q14526 733 aa5.7□□□□□ -1.5
NPM1-210ENST00000523339 SLC15A2Q16348 729 aa5.7□□□□□ -1.5
NPM1-210ENST00000523339 TMEM132EQ6IEE7 984 aa5.7□□□□□ -1.5
NPM1-210ENST00000523339 BARGINQ6ZT62 677 aa5.7□□□□□ -1.5
NPM1-210ENST00000523339 DAXXQ9UER7 740 aaPredicted RBP5.7□□□□□ -1.5
NPM1-210ENST00000523339 SLC27A5Q9Y2P5 690 aa5.7□□□□□ -1.5
NPM1-210ENST00000523339 TNS1Q9HBL0 1735 aaKnown RBP5.7□□□□□ -1.5
NPM1-210ENST00000523339 RPGRIP1LQ68CZ1 1315 aa5.7□□□□□ -1.5
NPM1-210ENST00000523339 E9PCH4 1651 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 KIF1AQ12756 1690 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 KIAA0232Q92628 1395 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 TECPR2O15040 1411 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 ATP10DQ9P241 1426 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 PLSCR1O15162 318 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 PRELPP51888 382 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 DDB1Q16531 1140 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 NUTM2GQ5VZR2 741 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 PRDM9Q9NQV7 894 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 TOR4AQ9NXH8 423 aa5.69□□□□□ -1.5
NPM1-210ENST00000523339 OVOS2A0A0G2JMS6 1433 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 OVOS2A0A0J9YW53 1432 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 OVOS2Q6IE36 1432 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 DDX11L8A8MPP1 907 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 GNPATO15228 680 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 GCGRP47871 477 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 TXNRD1Q16881 649 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 RGL3Q3MIN7 710 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 COL13A1Q5TAT6 717 aaPredicted RBP5.68□□□□□ -1.5
NPM1-210ENST00000523339 LARP1Q6PKG0 1096 aaKnown RBP5.68□□□□□ -1.5
NPM1-210ENST00000523339 THRAP3Q9Y2W1 955 aaKnown RBP5.68□□□□□ -1.5
NPM1-210ENST00000523339 MYOM1P52179 1685 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 NEXMIFQ5QGS0 1516 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 NUP188Q5SRE5 1749 aa5.68□□□□□ -1.5
NPM1-210ENST00000523339 PLEKHH1Q9ULM0 1364 aa5.67□□□□□ -1.5
NPM1-210ENST00000523339 COL14A1Q05707 1796 aaKnown RBP5.67□□□□□ -1.5
NPM1-210ENST00000523339 BRICD5Q6PL45 260 aa5.67□□□□□ -1.5
NPM1-210ENST00000523339 RNF19BQ6ZMZ0 732 aa5.67□□□□□ -1.5
NPM1-210ENST00000523339 C16orf71Q8IYS4 520 aaPredicted RBP5.67□□□□□ -1.5
NPM1-210ENST00000523339 FCF1Q9Y324 198 aaKnown RBP5.67□□□□□ -1.5
NPM1-210ENST00000523339 THSD7AQ9UPZ6 1657 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 NRXN1Q9ULB1 1477 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 ATP6V1AP38606 617 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 TREML4Q6UXN2 200 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 TOM1L2Q6ZVM7 507 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 RDH13Q8NBN7 331 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 PRAM1Q96QH2 718 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 HIRIP3Q9BW71 556 aaPredicted RBP5.66□□□□□ -1.5
NPM1-210ENST00000523339 WWC3Q9ULE0 1092 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 ACIN1Q9UKV3 1341 aaKnown RBP5.66□□□□□ -1.5
NPM1-210ENST00000523339 EIF3AQ14152 1382 aaKnown RBP5.66□□□□□ -1.5
NPM1-210ENST00000523339 DHX57Q6P158 1386 aaKnown RBP5.66□□□□□ -1.5
NPM1-210ENST00000523339 RREB1Q92766 1687 aa5.66□□□□□ -1.5
NPM1-210ENST00000523339 SSH2Q76I76 1423 aa5.65□□□□□ -1.5
NPM1-210ENST00000523339 PRAG1Q86YV5 1406 aa5.65□□□□□ -1.5
NPM1-210ENST00000523339 AVPP01185 164 aa5.65□□□□□ -1.5
NPM1-210ENST00000523339 CSB-PGBD3P0DP91 1061 aa5.65□□□□□ -1.5
NPM1-210ENST00000523339 RPIAP49247 311 aa5.65□□□□□ -1.5
NPM1-210ENST00000523339 GMPR2Q9P2T1 348 aaKnown RBP5.65□□□□□ -1.5
NPM1-210ENST00000523339 ABCC11Q96J66 1382 aa5.65□□□□□ -1.51
NPM1-210ENST00000523339 MAP3K5Q99683 1374 aa5.65□□□□□ -1.51
NPM1-210ENST00000523339 NRAPQ86VF7 1730 aa5.65□□□□□ -1.51
NPM1-210ENST00000523339 LCE2CQ5TA81 110 aa5.64□□□□□ -1.51
NPM1-210ENST00000523339 ABTB2Q8N961 1025 aa5.64□□□□□ -1.51
NPM1-210ENST00000523339 NLGN2Q8NFZ4 835 aa5.64□□□□□ -1.51
NPM1-210ENST00000523339 HLA-CQ95604 372 aa5.64□□□□□ -1.51
NPM1-210ENST00000523339 TFCP2L1Q9NZI6 479 aa5.64□□□□□ -1.51
NPM1-210ENST00000523339 ADGRF5Q8IZF2 1346 aa5.64□□□□□ -1.51
NPM1-210ENST00000523339 ROCK1Q13464 1354 aa5.64□□□□□ -1.51
NPM1-210ENST00000523339 AATKQ6ZMQ8 1374 aa5.64□□□□□ -1.51
NPM1-210ENST00000523339 EXOC5O00471 708 aa5.63□□□□□ -1.51
NPM1-210ENST00000523339 FMNL1O95466 1100 aaPredicted RBP5.63□□□□□ -1.51
NPM1-210ENST00000523339 YBX3P16989 372 aaKnown RBP eCLIP5.63□□□□□ -1.511e-48■□□□□ 10.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms