RNA–Protein interactions for RNA: ENST00000523248.1

PDGFRL-202, Transcript of platelet derived growth factor receptor like, humanhuman

TSL 3

Gene PDGFRL, Length 644 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRL-202ENST00000523248 NARFQ9UHQ1 456 aa17.79■□□□□ 0.44
PDGFRL-202ENST00000523248 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
PDGFRL-202ENST00000523248 COL15A1P39059 1388 aa17.78■□□□□ 0.44
PDGFRL-202ENST00000523248 BRCA1P38398 1863 aaKnown RBP17.78■□□□□ 0.44
PDGFRL-202ENST00000523248 ZPR1O75312 459 aa17.77■□□□□ 0.44
PDGFRL-202ENST00000523248 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
PDGFRL-202ENST00000523248 ZNF790Q6PG37 636 aa17.77■□□□□ 0.44
PDGFRL-202ENST00000523248 ZNF496Q96IT1 587 aaPredicted RBP17.77■□□□□ 0.44
PDGFRL-202ENST00000523248 FCHSD2O94868 740 aa17.76■□□□□ 0.43
PDGFRL-202ENST00000523248 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
PDGFRL-202ENST00000523248 EIF5P55010 431 aaKnown RBP17.76■□□□□ 0.43
PDGFRL-202ENST00000523248 NFIXQ14938 502 aa17.76■□□□□ 0.43
PDGFRL-202ENST00000523248 ZNF526Q8TF50 670 aaPredicted RBP17.76■□□□□ 0.43
PDGFRL-202ENST00000523248 TTC5Q8N0Z6 440 aa17.75■□□□□ 0.43
PDGFRL-202ENST00000523248 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
PDGFRL-202ENST00000523248 HEG1Q9ULI3 1381 aa17.75■□□□□ 0.43
PDGFRL-202ENST00000523248 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
PDGFRL-202ENST00000523248 CHRNA5P30532 468 aa17.74■□□□□ 0.43
PDGFRL-202ENST00000523248 TEFQ10587 303 aa17.74■□□□□ 0.43
PDGFRL-202ENST00000523248 ARHGAP27Q6ZUM4 889 aa17.74■□□□□ 0.43
PDGFRL-202ENST00000523248 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
PDGFRL-202ENST00000523248 KIF3CO14782 793 aa17.73■□□□□ 0.43
PDGFRL-202ENST00000523248 KCNQ3O43525 872 aa17.73■□□□□ 0.43
PDGFRL-202ENST00000523248 STARD3NLO95772 234 aa17.73■□□□□ 0.43
PDGFRL-202ENST00000523248 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
PDGFRL-202ENST00000523248 DALRD3Q5D0E6 543 aaKnown RBP17.72■□□□□ 0.43
PDGFRL-202ENST00000523248 NRXN2Q9P2S2 1712 aa17.72■□□□□ 0.43
PDGFRL-202ENST00000523248 TEX13AQ9BXU3 409 aaPredicted RBP17.71■□□□□ 0.43
PDGFRL-202ENST00000523248 NUDCQ9Y266 331 aa17.71■□□□□ 0.43
PDGFRL-202ENST00000523248 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
PDGFRL-202ENST00000523248 SERPINB2P05120 415 aa17.7■□□□□ 0.42
PDGFRL-202ENST00000523248 U2AF1L5P0DN76 240 aaPredicted RBP17.7■□□□□ 0.42
PDGFRL-202ENST00000523248 U2AF1Q01081 240 aaKnown RBP eCLIP17.7■□□□□ 0.42
PDGFRL-202ENST00000523248 FMNL2Q96PY5 1086 aa17.7■□□□□ 0.42
PDGFRL-202ENST00000523248 A0A087WZG4 1122 aa17.69■□□□□ 0.42
PDGFRL-202ENST00000523248 BTBD11A6QL63 1104 aa17.69■□□□□ 0.42
PDGFRL-202ENST00000523248 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
PDGFRL-202ENST00000523248 A1BGP04217 495 aa17.68■□□□□ 0.42
PDGFRL-202ENST00000523248 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
PDGFRL-202ENST00000523248 C9orf131Q5VYM1 1079 aa17.68■□□□□ 0.42
PDGFRL-202ENST00000523248 CARMIL3Q8ND23 1372 aa17.67■□□□□ 0.42
PDGFRL-202ENST00000523248 TBC1D9BQ66K14 1250 aa17.67■□□□□ 0.42
PDGFRL-202ENST00000523248 MCM10Q7L590 875 aa17.67■□□□□ 0.42
PDGFRL-202ENST00000523248 TBC1D2BQ9UPU7 963 aa17.67■□□□□ 0.42
PDGFRL-202ENST00000523248 PRAMEF22A3QJZ6 481 aa17.66■□□□□ 0.42
PDGFRL-202ENST00000523248 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
PDGFRL-202ENST00000523248 HTATSF1O43719 755 aaKnown RBP17.65■□□□□ 0.42
PDGFRL-202ENST00000523248 CAMTA2O94983 1202 aa17.65■□□□□ 0.42
PDGFRL-202ENST00000523248 HSPA6P17066 643 aa17.65■□□□□ 0.42
PDGFRL-202ENST00000523248 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
PDGFRL-202ENST00000523248 BICDL1Q6ZP65 573 aa17.65■□□□□ 0.42
PDGFRL-202ENST00000523248 NMRK2Q9NPI5 230 aa17.64■□□□□ 0.41
PDGFRL-202ENST00000523248 SCN7AQ01118 1682 aa17.64■□□□□ 0.41
PDGFRL-202ENST00000523248 PRELPP51888 382 aa17.63■□□□□ 0.41
PDGFRL-202ENST00000523248 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
PDGFRL-202ENST00000523248 PRR5LQ6MZQ0 368 aa17.62■□□□□ 0.41
PDGFRL-202ENST00000523248 TTLL6Q8N841 843 aa17.62■□□□□ 0.41
PDGFRL-202ENST00000523248 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
PDGFRL-202ENST00000523248 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
PDGFRL-202ENST00000523248 RNF181Q9P0P0 153 aa17.62■□□□□ 0.41
PDGFRL-202ENST00000523248 ZNF330Q9Y3S2 320 aaPredicted RBP17.62■□□□□ 0.41
PDGFRL-202ENST00000523248 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
PDGFRL-202ENST00000523248 TOMM70O94826 608 aa17.61■□□□□ 0.41
PDGFRL-202ENST00000523248 SNRPA1P09661 255 aaKnown RBP17.61■□□□□ 0.41
PDGFRL-202ENST00000523248 PIP4K2AP48426 406 aaPredicted RBP17.61■□□□□ 0.41
PDGFRL-202ENST00000523248 RASSF7Q02833 373 aa17.61■□□□□ 0.41
PDGFRL-202ENST00000523248 BRIP1Q9BX63 1249 aa17.61■□□□□ 0.41
PDGFRL-202ENST00000523248 NBPF26B4DH59 902 aa17.6■□□□□ 0.41
PDGFRL-202ENST00000523248 H0YIN7 160 aa17.6■□□□□ 0.41
PDGFRL-202ENST00000523248 NBPF10Q6P3W6 841 aaKnown RBP17.6■□□□□ 0.41
PDGFRL-202ENST00000523248 DZIP3Q86Y13 1208 aaKnown RBP17.6■□□□□ 0.41
PDGFRL-202ENST00000523248 NBPF15Q8N660 670 aa17.6■□□□□ 0.41
PDGFRL-202ENST00000523248 SBF1O95248 1867 aa17.6■□□□□ 0.41
PDGFRL-202ENST00000523248 ANKRD31Q8N7Z5 1873 aa17.6■□□□□ 0.41
PDGFRL-202ENST00000523248 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
PDGFRL-202ENST00000523248 CCDC24Q8N4L8 307 aa17.59■□□□□ 0.41
PDGFRL-202ENST00000523248 NFKBIEO00221 500 aa17.58■□□□□ 0.4
PDGFRL-202ENST00000523248 SETDB2Q96T68 719 aa17.58■□□□□ 0.4
PDGFRL-202ENST00000523248 MIS18AQ9NYP9 233 aa17.58■□□□□ 0.4
PDGFRL-202ENST00000523248 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
PDGFRL-202ENST00000523248 LMNB1P20700 586 aa17.57■□□□□ 0.4
PDGFRL-202ENST00000523248 PDE6BP35913 854 aa17.57■□□□□ 0.4
PDGFRL-202ENST00000523248 CLEC4GQ6UXB4 293 aa17.57■□□□□ 0.4
PDGFRL-202ENST00000523248 BCORQ6W2J9 1755 aa17.56■□□□□ 0.4
PDGFRL-202ENST00000523248 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
PDGFRL-202ENST00000523248 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
PDGFRL-202ENST00000523248 RGL2O15211 777 aa17.55■□□□□ 0.4
PDGFRL-202ENST00000523248 NPM2Q86SE8 214 aaKnown RBP17.55■□□□□ 0.4
PDGFRL-202ENST00000523248 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
PDGFRL-202ENST00000523248 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
PDGFRL-202ENST00000523248 COL11A2P13942 1736 aaPredicted RBP17.55■□□□□ 0.4
PDGFRL-202ENST00000523248 SRGNP10124 158 aa17.54■□□□□ 0.4
PDGFRL-202ENST00000523248 NFE2L2Q16236 605 aa17.54■□□□□ 0.4
PDGFRL-202ENST00000523248 ZNF622Q969S3 477 aaKnown RBP eCLIP17.54■□□□□ 0.4
PDGFRL-202ENST00000523248 RRAGCQ9HB90 399 aa17.54■□□□□ 0.4
PDGFRL-202ENST00000523248 APLP1P51693 650 aa17.53■□□□□ 0.4
PDGFRL-202ENST00000523248 DNAJC5GQ8N7S2 189 aa17.53■□□□□ 0.4
PDGFRL-202ENST00000523248 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
PDGFRL-202ENST00000523248 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
PDGFRL-202ENST00000523248 C21orf2O43822 256 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms