RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
DENND3-220ENST00000523066 KDM3BQ7LBC6 1761 aa13.88□□□□□ -0.19
DENND3-220ENST00000523066 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
DENND3-220ENST00000523066 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
DENND3-220ENST00000523066 SGIP1Q9BQI5 828 aa13.87□□□□□ -0.19
DENND3-220ENST00000523066 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
DENND3-220ENST00000523066 CYP19A1P11511 503 aaPredicted RBP13.86□□□□□ -0.19
DENND3-220ENST00000523066 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
DENND3-220ENST00000523066 INTS5Q6P9B9 1019 aaKnown RBP13.86□□□□□ -0.19
DENND3-220ENST00000523066 HEG1Q9ULI3 1381 aa13.85□□□□□ -0.19
DENND3-220ENST00000523066 SSFA2P28290 1259 aa13.85□□□□□ -0.19
DENND3-220ENST00000523066 POLA2Q14181 598 aa13.85□□□□□ -0.19
DENND3-220ENST00000523066 RC3H1Q5TC82 1133 aaKnown RBP13.85□□□□□ -0.19
DENND3-220ENST00000523066 PNISRQ8TF01 805 aaKnown RBP13.85□□□□□ -0.19
DENND3-220ENST00000523066 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
DENND3-220ENST00000523066 RTCBQ9Y3I0 505 aaKnown RBP13.85□□□□□ -0.19
DENND3-220ENST00000523066 APAF1O14727 1248 aa13.84□□□□□ -0.19
DENND3-220ENST00000523066 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
DENND3-220ENST00000523066 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
DENND3-220ENST00000523066 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
DENND3-220ENST00000523066 PPP1R1BQ9UD71 204 aaPredicted RBP13.84□□□□□ -0.19
DENND3-220ENST00000523066 ZBTB1Q9Y2K1 713 aa13.84□□□□□ -0.19
DENND3-220ENST00000523066 VSIG10Q8N0Z9 540 aa13.83□□□□□ -0.2
DENND3-220ENST00000523066 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
DENND3-220ENST00000523066 FMNL2Q96PY5 1086 aa13.83□□□□□ -0.2
DENND3-220ENST00000523066 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
DENND3-220ENST00000523066 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
DENND3-220ENST00000523066 CANXP27824 592 aaKnown RBP13.82□□□□□ -0.2
DENND3-220ENST00000523066 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
DENND3-220ENST00000523066 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
DENND3-220ENST00000523066 TRAPPC3LQ5T215 181 aa13.82□□□□□ -0.2
DENND3-220ENST00000523066 SRP68Q9UHB9 627 aaKnown RBP13.82□□□□□ -0.2
DENND3-220ENST00000523066 A1BGP04217 495 aa13.81□□□□□ -0.2
DENND3-220ENST00000523066 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
DENND3-220ENST00000523066 ARXQ96QS3 562 aa13.81□□□□□ -0.2
DENND3-220ENST00000523066 LAMB4A4D0S4 1761 aa13.81□□□□□ -0.2
DENND3-220ENST00000523066 SRCAPQ6ZRS2 3230 aa13.8□□□□□ -0.2
DENND3-220ENST00000523066 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
DENND3-220ENST00000523066 FHDC1Q9C0D6 1143 aaPredicted RBP13.8□□□□□ -0.2
DENND3-220ENST00000523066 LAS1LQ9Y4W2 734 aaKnown RBP13.8□□□□□ -0.2
DENND3-220ENST00000523066 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
DENND3-220ENST00000523066 RFC4P35249 363 aa13.79□□□□□ -0.2
DENND3-220ENST00000523066 EIF4A1P60842 406 aaKnown RBP13.79□□□□□ -0.2
DENND3-220ENST00000523066 LMOD3Q0VAK6 560 aa13.79□□□□□ -0.2
DENND3-220ENST00000523066 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
DENND3-220ENST00000523066 TSPYL4Q9UJ04 414 aa13.79□□□□□ -0.2
DENND3-220ENST00000523066 ZNF330Q9Y3S2 320 aaPredicted RBP13.79□□□□□ -0.2
DENND3-220ENST00000523066 STARD3NLO95772 234 aa13.78□□□□□ -0.2
DENND3-220ENST00000523066 SNRPA1P09661 255 aaKnown RBP13.78□□□□□ -0.2
DENND3-220ENST00000523066 GYS1P13807 737 aa13.78□□□□□ -0.2
DENND3-220ENST00000523066 POLD1P28340 1107 aa13.78□□□□□ -0.2
DENND3-220ENST00000523066 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
DENND3-220ENST00000523066 COL15A1P39059 1388 aa13.78□□□□□ -0.2
DENND3-220ENST00000523066 USPL1Q5W0Q7 1092 aa13.77□□□□□ -0.21
DENND3-220ENST00000523066 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
DENND3-220ENST00000523066 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.21
DENND3-220ENST00000523066 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
DENND3-220ENST00000523066 EIF5P55010 431 aaKnown RBP13.76□□□□□ -0.21
DENND3-220ENST00000523066 SYT17Q9BSW7 474 aa13.76□□□□□ -0.21
DENND3-220ENST00000523066 SALL2Q9Y467 1007 aaPredicted RBP13.76□□□□□ -0.21
DENND3-220ENST00000523066 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
DENND3-220ENST00000523066 CHL1O00533 1208 aa13.75□□□□□ -0.21
DENND3-220ENST00000523066 MMP10P09238 476 aa13.75□□□□□ -0.21
DENND3-220ENST00000523066 NBPF10Q6P3W6 841 aaKnown RBP13.75□□□□□ -0.21
DENND3-220ENST00000523066 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
DENND3-220ENST00000523066 BCL2L12Q9HB09 334 aa13.75□□□□□ -0.21
DENND3-220ENST00000523066 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
DENND3-220ENST00000523066 AFDNP55196 1824 aaKnown RBP13.74□□□□□ -0.21
DENND3-220ENST00000523066 BCORQ6W2J9 1755 aa13.74□□□□□ -0.21
DENND3-220ENST00000523066 ABCB7O75027 752 aa13.74□□□□□ -0.21
DENND3-220ENST00000523066 NLGN2Q8NFZ4 835 aa13.74□□□□□ -0.21
DENND3-220ENST00000523066 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
DENND3-220ENST00000523066 SCN7AQ01118 1682 aa13.74□□□□□ -0.21
DENND3-220ENST00000523066 ZPR1O75312 459 aa13.73□□□□□ -0.21
DENND3-220ENST00000523066 IL6STP40189 918 aaPredicted RBP13.73□□□□□ -0.21
DENND3-220ENST00000523066 NLGN1Q8N2Q7 840 aa13.73□□□□□ -0.21
DENND3-220ENST00000523066 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
DENND3-220ENST00000523066 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
DENND3-220ENST00000523066 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
DENND3-220ENST00000523066 ZNF853P0CG23 659 aa13.72□□□□□ -0.21
DENND3-220ENST00000523066 EIF2S2P20042 333 aaKnown RBP13.72□□□□□ -0.21
DENND3-220ENST00000523066 DDR1Q08345 913 aa13.72□□□□□ -0.21
DENND3-220ENST00000523066 DIEXFQ68CQ4 756 aaKnown RBP13.72□□□□□ -0.21
DENND3-220ENST00000523066 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
DENND3-220ENST00000523066 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
DENND3-220ENST00000523066 KIF13BQ9NQT8 1826 aa13.71□□□□□ -0.21
DENND3-220ENST00000523066 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.21
DENND3-220ENST00000523066 ANXA1P04083 346 aa13.71□□□□□ -0.21
DENND3-220ENST00000523066 MYL6BP14649 208 aa13.71□□□□□ -0.21
DENND3-220ENST00000523066 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
DENND3-220ENST00000523066 MIER1Q8N108 512 aa13.71□□□□□ -0.21
DENND3-220ENST00000523066 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
DENND3-220ENST00000523066 KIAA1551Q9HCM1 1747 aa13.7□□□□□ -0.22
DENND3-220ENST00000523066 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
DENND3-220ENST00000523066 TM4SF1P30408 202 aa13.7□□□□□ -0.22
DENND3-220ENST00000523066 NFIXQ14938 502 aa13.7□□□□□ -0.22
DENND3-220ENST00000523066 TBC1D9BQ66K14 1250 aa13.7□□□□□ -0.22
DENND3-220ENST00000523066 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
DENND3-220ENST00000523066 DZIP3Q86Y13 1208 aaKnown RBP13.7□□□□□ -0.22
DENND3-220ENST00000523066 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms