RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 NUTM2EB1AL46 878 aaPredicted RBP10.65□□□□□ -0.7
SDCBP-210ENST00000522843 NR5A1Q13285 461 aa10.65□□□□□ -0.7
SDCBP-210ENST00000522843 RSBN1LQ6PCB5 846 aaPredicted RBP10.65□□□□□ -0.7
SDCBP-210ENST00000522843 NUTM2AQ8IVF1 878 aaPredicted RBP10.65□□□□□ -0.7
SDCBP-210ENST00000522843 PCDHB15Q9Y5E8 787 aa10.65□□□□□ -0.7
SDCBP-210ENST00000522843 CFAP99D6REC4 459 aa10.64□□□□□ -0.71
SDCBP-210ENST00000522843 ZMYND10O75800 440 aa10.64□□□□□ -0.71
SDCBP-210ENST00000522843 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
SDCBP-210ENST00000522843 ZFYVE9O95405 1425 aa10.64□□□□□ -0.71
SDCBP-210ENST00000522843 NOS1P29475 1434 aa10.64□□□□□ -0.71
SDCBP-210ENST00000522843 NCOA3Q9Y6Q9 1424 aa10.64□□□□□ -0.71
SDCBP-210ENST00000522843 MAN1A2O60476 641 aa10.63□□□□□ -0.71
SDCBP-210ENST00000522843 F12P00748 615 aaPredicted RBP10.63□□□□□ -0.71
SDCBP-210ENST00000522843 RBM6P78332 1123 aaKnown RBP10.63□□□□□ -0.71
SDCBP-210ENST00000522843 BRINP3Q76B58 766 aa10.63□□□□□ -0.71
SDCBP-210ENST00000522843 ITPKCQ96DU7 683 aa10.63□□□□□ -0.71
SDCBP-210ENST00000522843 LMTK2Q8IWU2 1503 aa10.63□□□□□ -0.71
SDCBP-210ENST00000522843 EP400Q96L91 3159 aa10.63□□□□□ -0.71
SDCBP-210ENST00000522843 HRCP23327 699 aa10.62□□□□□ -0.71
SDCBP-210ENST00000522843 GRM5P41594 1212 aa10.62□□□□□ -0.71
SDCBP-210ENST00000522843 C6orf118Q5T5N4 469 aa10.62□□□□□ -0.71
SDCBP-210ENST00000522843 ZBTB3Q9H5J0 574 aa10.62□□□□□ -0.71
SDCBP-210ENST00000522843 QTRT2Q9H974 415 aaKnown RBP10.62□□□□□ -0.71
SDCBP-210ENST00000522843 MAP10Q9P2G4 905 aa10.62□□□□□ -0.71
SDCBP-210ENST00000522843 PLEKHG1Q9ULL1 1385 aa10.62□□□□□ -0.71
SDCBP-210ENST00000522843 ERBINQ96RT1 1412 aa10.61□□□□□ -0.71
SDCBP-210ENST00000522843 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
SDCBP-210ENST00000522843 SPTLC1O15269 473 aa10.61□□□□□ -0.71
SDCBP-210ENST00000522843 NR3C2P08235 984 aa10.61□□□□□ -0.71
SDCBP-210ENST00000522843 AGERQ15109 404 aa10.61□□□□□ -0.71
SDCBP-210ENST00000522843 NUTM2DQ5VT03 806 aaPredicted RBP10.61□□□□□ -0.71
SDCBP-210ENST00000522843 KIF15Q9NS87 1388 aa10.61□□□□□ -0.71
SDCBP-210ENST00000522843 ADAMTS13Q76LX8 1427 aa10.6□□□□□ -0.71
SDCBP-210ENST00000522843 UPP2O95045 317 aa10.6□□□□□ -0.71
SDCBP-210ENST00000522843 C4orf48Q5BLP8 95 aa10.6□□□□□ -0.71
SDCBP-210ENST00000522843 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
SDCBP-210ENST00000522843 MYO5BQ9ULV0 1848 aa10.6□□□□□ -0.71
SDCBP-210ENST00000522843 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
SDCBP-210ENST00000522843 PPFIA3O75145 1194 aa10.59□□□□□ -0.71
SDCBP-210ENST00000522843 BMP2P12643 396 aa10.59□□□□□ -0.71
SDCBP-210ENST00000522843 PRPF38BQ5VTL8 546 aaKnown RBP10.59□□□□□ -0.71
SDCBP-210ENST00000522843 BCANQ96GW7 911 aa10.59□□□□□ -0.71
SDCBP-210ENST00000522843 C8orf37Q96NL8 207 aa10.59□□□□□ -0.71
SDCBP-210ENST00000522843 C19orf44Q9H6X5 657 aa10.59□□□□□ -0.71
SDCBP-210ENST00000522843 TBX22Q9Y458 520 aa10.59□□□□□ -0.71
SDCBP-210ENST00000522843 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
SDCBP-210ENST00000522843 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
SDCBP-210ENST00000522843 ATAD2Q6PL18 1390 aa10.58□□□□□ -0.72
SDCBP-210ENST00000522843 RRP7BPQ9NSQ0 103 aa10.58□□□□□ -0.72
SDCBP-210ENST00000522843 ABCC5O15440 1437 aa10.58□□□□□ -0.72
SDCBP-210ENST00000522843 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
SDCBP-210ENST00000522843 PNPLA6Q8IY17 1366 aa10.57□□□□□ -0.72
SDCBP-210ENST00000522843 ATF3P18847 181 aa10.57□□□□□ -0.72
SDCBP-210ENST00000522843 RIC3Q7Z5B4 369 aa10.57□□□□□ -0.72
SDCBP-210ENST00000522843 C14orf37Q86TY3 774 aa10.57□□□□□ -0.72
SDCBP-210ENST00000522843 DDX17Q92841 729 aaKnown RBP10.57□□□□□ -0.72
SDCBP-210ENST00000522843 TMEM131LA2VDJ0 1609 aa10.56□□□□□ -0.72
SDCBP-210ENST00000522843 LOC100996750A0A140TA64 210 aa10.56□□□□□ -0.72
SDCBP-210ENST00000522843 LINC00528Q8N1L1 170 aa10.56□□□□□ -0.72
SDCBP-210ENST00000522843 KRTAP4-6Q9BYQ5 205 aa10.56□□□□□ -0.72
SDCBP-210ENST00000522843 MST1RQ04912 1400 aa10.56□□□□□ -0.72
SDCBP-210ENST00000522843 MYOM3Q5VTT5 1437 aa10.56□□□□□ -0.72
SDCBP-210ENST00000522843 CROCC2H7BZ55 1655 aa10.56□□□□□ -0.72
SDCBP-210ENST00000522843 GCC2Q8IWJ2 1684 aa10.56□□□□□ -0.72
SDCBP-210ENST00000522843 PER1O15534 1290 aaPredicted RBP10.55□□□□□ -0.72
SDCBP-210ENST00000522843 KCNMA1Q12791 1236 aa10.55□□□□□ -0.72
SDCBP-210ENST00000522843 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
SDCBP-210ENST00000522843 MEIOBQ8N635 442 aa10.55□□□□□ -0.72
SDCBP-210ENST00000522843 CABLES1Q8TDN4 633 aa10.55□□□□□ -0.72
SDCBP-210ENST00000522843 SLC52A1Q9NWF4 448 aa10.55□□□□□ -0.72
SDCBP-210ENST00000522843 SOS2Q07890 1332 aaPredicted RBP10.55□□□□□ -0.72
SDCBP-210ENST00000522843 KANK1Q14678 1352 aa10.54□□□□□ -0.72
SDCBP-210ENST00000522843 KANK4Q5T7N3 995 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-210ENST00000522843 ARMC2Q8NEN0 867 aa10.54□□□□□ -0.72
SDCBP-210ENST00000522843 PIK3R4Q99570 1358 aa10.53□□□□□ -0.72
SDCBP-210ENST00000522843 DCCP43146 1447 aa10.53□□□□□ -0.72
SDCBP-210ENST00000522843 LRRC59Q96AG4 307 aaKnown RBP10.53□□□□□ -0.72
SDCBP-210ENST00000522843 ATRNO75882 1429 aa10.52□□□□□ -0.73
SDCBP-210ENST00000522843 PPP1R15AO75807 674 aaPredicted RBP10.52□□□□□ -0.73
SDCBP-210ENST00000522843 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
SDCBP-210ENST00000522843 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
SDCBP-210ENST00000522843 NGLY1Q96IV0 654 aa10.52□□□□□ -0.73
SDCBP-210ENST00000522843 TSEN34Q9BSV6 310 aaKnown RBP10.52□□□□□ -0.73
SDCBP-210ENST00000522843 C1QTNF2Q9BXJ5 285 aa10.52□□□□□ -0.73
SDCBP-210ENST00000522843 DNMT3LQ9UJW3 386 aa10.52□□□□□ -0.73
SDCBP-210ENST00000522843 AMOTL2Q9Y2J4 779 aa10.52□□□□□ -0.73
SDCBP-210ENST00000522843 SH3RF1Q7Z6J0 888 aa10.51□□□□□ -0.73
SDCBP-210ENST00000522843 TSC1Q92574 1164 aa10.51□□□□□ -0.73
SDCBP-210ENST00000522843 MAP4K5Q9Y4K4 846 aa10.51□□□□□ -0.73
SDCBP-210ENST00000522843 TRPM2O94759 1503 aa10.51□□□□□ -0.73
SDCBP-210ENST00000522843 DAPK1P53355 1430 aa10.5□□□□□ -0.73
SDCBP-210ENST00000522843 XRN1Q8IZH2 1706 aaKnown RBP10.5□□□□□ -0.73
SDCBP-210ENST00000522843 VASH1Q7L8A9 365 aaPredicted RBP10.5□□□□□ -0.73
SDCBP-210ENST00000522843 FNBP4Q8N3X1 1017 aaPredicted RBP10.5□□□□□ -0.73
SDCBP-210ENST00000522843 USP21Q9UK80 565 aa10.5□□□□□ -0.73
SDCBP-210ENST00000522843 LRP5O75197 1615 aa10.5□□□□□ -0.73
SDCBP-210ENST00000522843 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
SDCBP-210ENST00000522843 UNC13BO14795 1591 aa10.49□□□□□ -0.73
SDCBP-210ENST00000522843 NRXN3Q9Y4C0 1643 aa10.49□□□□□ -0.73
SDCBP-210ENST00000522843 TRIM66O15016 1216 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms