RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-208ENST00000522501 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
CDKL3-208ENST00000522501 CCDC87Q9NVE4 849 aa11.93□□□□□ -0.5
CDKL3-208ENST00000522501 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
CDKL3-208ENST00000522501 PHKG2P15735 406 aa11.92□□□□□ -0.5
CDKL3-208ENST00000522501 DPEP1P16444 411 aa11.92□□□□□ -0.5
CDKL3-208ENST00000522501 HTRA3P83110 453 aa11.92□□□□□ -0.5
CDKL3-208ENST00000522501 FSTL1Q12841 308 aa11.92□□□□□ -0.5
CDKL3-208ENST00000522501 COL13A1Q5TAT6 717 aaPredicted RBP11.92□□□□□ -0.5
CDKL3-208ENST00000522501 ARHGAP27Q6ZUM4 889 aa11.92□□□□□ -0.5
CDKL3-208ENST00000522501 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
CDKL3-208ENST00000522501 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
CDKL3-208ENST00000522501 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
CDKL3-208ENST00000522501 KDM6AO15550 1401 aaPredicted RBP11.92□□□□□ -0.5
CDKL3-208ENST00000522501 COL11A2P13942 1736 aaPredicted RBP11.91□□□□□ -0.5
CDKL3-208ENST00000522501 ANKRD31Q8N7Z5 1873 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 FCHSD2O94868 740 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 GYS1P13807 737 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 TMF1P82094 1093 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 C9orf131Q5VYM1 1079 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
CDKL3-208ENST00000522501 UBR2Q8IWV8 1755 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 ARFGEF2Q9Y6D5 1785 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 FER1L6Q2WGJ9 1857 aa11.91□□□□□ -0.5
CDKL3-208ENST00000522501 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
CDKL3-208ENST00000522501 C16orf71Q8IYS4 520 aaPredicted RBP11.9□□□□□ -0.5
CDKL3-208ENST00000522501 IFNL2Q8IZJ0 200 aa11.9□□□□□ -0.5
CDKL3-208ENST00000522501 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
CDKL3-208ENST00000522501 SLC4A9Q96Q91 983 aa11.9□□□□□ -0.5
CDKL3-208ENST00000522501 SCN7AQ01118 1682 aa11.9□□□□□ -0.5
CDKL3-208ENST00000522501 KDM2BQ8NHM5 1336 aa11.89□□□□□ -0.51
CDKL3-208ENST00000522501 KCNA3P22001 575 aa11.89□□□□□ -0.51
CDKL3-208ENST00000522501 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
CDKL3-208ENST00000522501 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
CDKL3-208ENST00000522501 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
CDKL3-208ENST00000522501 DCAF5Q96JK2 942 aa11.89□□□□□ -0.51
CDKL3-208ENST00000522501 EYA1Q99502 592 aa11.89□□□□□ -0.51
CDKL3-208ENST00000522501 RGL2O15211 777 aa11.88□□□□□ -0.51
CDKL3-208ENST00000522501 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
CDKL3-208ENST00000522501 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
CDKL3-208ENST00000522501 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
CDKL3-208ENST00000522501 RNF181Q9P0P0 153 aa11.87□□□□□ -0.51
CDKL3-208ENST00000522501 MRC1P22897 1456 aa11.87□□□□□ -0.51
CDKL3-208ENST00000522501 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
CDKL3-208ENST00000522501 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
CDKL3-208ENST00000522501 ERVV-2B6SEH9 535 aa11.86□□□□□ -0.51
CDKL3-208ENST00000522501 PPM1GO15355 546 aaPredicted RBP11.86□□□□□ -0.51
CDKL3-208ENST00000522501 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
CDKL3-208ENST00000522501 RFC4P35249 363 aa11.86□□□□□ -0.51
CDKL3-208ENST00000522501 PRELPP51888 382 aa11.86□□□□□ -0.51
CDKL3-208ENST00000522501 DDR1Q08345 913 aa11.86□□□□□ -0.51
CDKL3-208ENST00000522501 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
CDKL3-208ENST00000522501 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
CDKL3-208ENST00000522501 CHRM1P11229 460 aaPredicted RBP11.85□□□□□ -0.51
CDKL3-208ENST00000522501 CDCA8Q53HL2 280 aa11.85□□□□□ -0.51
CDKL3-208ENST00000522501 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
CDKL3-208ENST00000522501 SMC1BQ8NDV3 1235 aa11.85□□□□□ -0.51
CDKL3-208ENST00000522501 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
CDKL3-208ENST00000522501 EIF4A2Q14240 407 aaKnown RBP11.84□□□□□ -0.51
CDKL3-208ENST00000522501 SIPA1L3O60292 1781 aaPredicted RBP11.83□□□□□ -0.52
CDKL3-208ENST00000522501 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
CDKL3-208ENST00000522501 CRKLP46109 303 aaKnown RBP11.83□□□□□ -0.52
CDKL3-208ENST00000522501 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
CDKL3-208ENST00000522501 POLKQ9UBT6 870 aa11.83□□□□□ -0.52
CDKL3-208ENST00000522501 SRP68Q9UHB9 627 aaKnown RBP11.83□□□□□ -0.52
CDKL3-208ENST00000522501 SCN4AP35499 1836 aa11.82□□□□□ -0.52
CDKL3-208ENST00000522501 POLRMTO00411 1230 aaKnown RBP11.82□□□□□ -0.52
CDKL3-208ENST00000522501 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
CDKL3-208ENST00000522501 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
CDKL3-208ENST00000522501 CHRNA5P30532 468 aa11.82□□□□□ -0.52
CDKL3-208ENST00000522501 RASSF7Q02833 373 aa11.82□□□□□ -0.52
CDKL3-208ENST00000522501 ZNF530Q6P9A1 599 aaPredicted RBP11.8□□□□□ -0.52
CDKL3-208ENST00000522501 GLTPD2A6NH11 291 aa11.79□□□□□ -0.52
CDKL3-208ENST00000522501 LMNB1P20700 586 aa11.79□□□□□ -0.52
CDKL3-208ENST00000522501 CABP4P57796 275 aa11.79□□□□□ -0.52
CDKL3-208ENST00000522501 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
CDKL3-208ENST00000522501 SOS1Q07889 1333 aaPredicted RBP11.79□□□□□ -0.52
CDKL3-208ENST00000522501 ADAMTSL1Q8N6G6 1762 aa11.79□□□□□ -0.52
CDKL3-208ENST00000522501 SLX4Q8IY92 1834 aa11.79□□□□□ -0.52
CDKL3-208ENST00000522501 COL15A1P39059 1388 aa11.79□□□□□ -0.52
CDKL3-208ENST00000522501 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
CDKL3-208ENST00000522501 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
CDKL3-208ENST00000522501 TM4SF1P30408 202 aa11.78□□□□□ -0.52
CDKL3-208ENST00000522501 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
CDKL3-208ENST00000522501 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
CDKL3-208ENST00000522501 THSD7BQ9C0I4 1608 aa11.78□□□□□ -0.52
CDKL3-208ENST00000522501 VEGFAP15692 232 aaPredicted RBP11.77□□□□□ -0.53
CDKL3-208ENST00000522501 INTS5Q6P9B9 1019 aaKnown RBP11.77□□□□□ -0.53
CDKL3-208ENST00000522501 NFKBIEO00221 500 aa11.76□□□□□ -0.53
CDKL3-208ENST00000522501 AMOTQ4VCS5 1084 aa11.76□□□□□ -0.53
CDKL3-208ENST00000522501 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
CDKL3-208ENST00000522501 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
CDKL3-208ENST00000522501 MTHFSP49914 203 aa11.75□□□□□ -0.53
CDKL3-208ENST00000522501 C1orf141Q5JVX7 400 aa11.75□□□□□ -0.53
CDKL3-208ENST00000522501 AEBP1Q8IUX7 1158 aa11.75□□□□□ -0.53
CDKL3-208ENST00000522501 POTECB2RU33 542 aa11.74□□□□□ -0.53
CDKL3-208ENST00000522501 ZPR1O75312 459 aa11.74□□□□□ -0.53
CDKL3-208ENST00000522501 NFIXQ14938 502 aa11.74□□□□□ -0.53
CDKL3-208ENST00000522501 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
CDKL3-208ENST00000522501 DNAJC10Q8IXB1 793 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms