RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 CCNL1Q9UK58 526 aaPredicted RBP15.73■□□□□ 0.11
SPIDR-219ENST00000522321 SUPT16HQ9Y5B9 1047 aaKnown RBP15.73■□□□□ 0.11
SPIDR-219ENST00000522321 BCAR3O75815 825 aa15.72■□□□□ 0.11
SPIDR-219ENST00000522321 RRP1P56182 461 aaKnown RBP15.72■□□□□ 0.11
SPIDR-219ENST00000522321 NBPF14Q5TI25 921 aa15.72■□□□□ 0.11
SPIDR-219ENST00000522321 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
SPIDR-219ENST00000522321 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
SPIDR-219ENST00000522321 DBF4Q9UBU7 674 aaPredicted RBP15.72■□□□□ 0.11
SPIDR-219ENST00000522321 BTAF1O14981 1849 aa15.72■□□□□ 0.11
SPIDR-219ENST00000522321 ERBB4Q15303 1308 aa15.71■□□□□ 0.11
SPIDR-219ENST00000522321 IPO8O15397 1037 aaKnown RBP15.71■□□□□ 0.11
SPIDR-219ENST00000522321 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
SPIDR-219ENST00000522321 CAMKK2Q96RR4 588 aa15.71■□□□□ 0.11
SPIDR-219ENST00000522321 LAMB4A4D0S4 1761 aa15.71■□□□□ 0.11
SPIDR-219ENST00000522321 HMGB2P26583 209 aaKnown RBP15.7■□□□□ 0.1
SPIDR-219ENST00000522321 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
SPIDR-219ENST00000522321 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
SPIDR-219ENST00000522321 USP16Q9Y5T5 823 aa15.7■□□□□ 0.1
SPIDR-219ENST00000522321 C5P01031 1676 aa15.7■□□□□ 0.1
SPIDR-219ENST00000522321 MYL6BP14649 208 aa15.69■□□□□ 0.1
SPIDR-219ENST00000522321 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
SPIDR-219ENST00000522321 FTSJ3Q8IY81 847 aaKnown RBP15.69■□□□□ 0.1
SPIDR-219ENST00000522321 HYPKQ9NX55 129 aa15.69■□□□□ 0.1
SPIDR-219ENST00000522321 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
SPIDR-219ENST00000522321 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
SPIDR-219ENST00000522321 MS4A1P11836 297 aa15.68■□□□□ 0.1
SPIDR-219ENST00000522321 SLC27A3Q5K4L6 730 aa15.68■□□□□ 0.1
SPIDR-219ENST00000522321 SLC4A9Q96Q91 983 aa15.68■□□□□ 0.1
SPIDR-219ENST00000522321 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
SPIDR-219ENST00000522321 SBF2Q86WG5 1849 aa15.68■□□□□ 0.1
SPIDR-219ENST00000522321 PTPRCP08575 1304 aa15.68■□□□□ 0.1
SPIDR-219ENST00000522321 DDX58O95786 925 aaKnown RBP15.67■□□□□ 0.1
SPIDR-219ENST00000522321 ANXA1P04083 346 aa15.67■□□□□ 0.1
SPIDR-219ENST00000522321 FKBP5Q13451 457 aaPredicted RBP15.67■□□□□ 0.1
SPIDR-219ENST00000522321 ITPK1Q13572 414 aa15.67■□□□□ 0.1
SPIDR-219ENST00000522321 API5Q9BZZ5 524 aaKnown RBP15.67■□□□□ 0.1
SPIDR-219ENST00000522321 CCDC87Q9NVE4 849 aa15.67■□□□□ 0.1
SPIDR-219ENST00000522321 NOB1Q9ULX3 412 aaKnown RBP15.67■□□□□ 0.1
SPIDR-219ENST00000522321 TJP1Q07157 1748 aa15.66■□□□□ 0.1
SPIDR-219ENST00000522321 PLIN1O60240 522 aa15.66■□□□□ 0.1
SPIDR-219ENST00000522321 A1BGP04217 495 aa15.66■□□□□ 0.1
SPIDR-219ENST00000522321 CYP19A1P11511 503 aaPredicted RBP15.66■□□□□ 0.1
SPIDR-219ENST00000522321 PIP4K2AP48426 406 aaPredicted RBP15.66■□□□□ 0.1
SPIDR-219ENST00000522321 BRPF1P55201 1214 aaPredicted RBP15.66■□□□□ 0.1
SPIDR-219ENST00000522321 FLIIQ13045 1269 aa15.66■□□□□ 0.1
SPIDR-219ENST00000522321 AK7Q96M32 723 aa15.66■□□□□ 0.1
SPIDR-219ENST00000522321 PLSCR1O15162 318 aa15.65■□□□□ 0.1
SPIDR-219ENST00000522321 CRKLP46109 303 aaKnown RBP15.65■□□□□ 0.1
SPIDR-219ENST00000522321 KCNQ4P56696 695 aa15.65■□□□□ 0.1
SPIDR-219ENST00000522321 AIMP1Q12904 312 aaKnown RBP15.65■□□□□ 0.1
SPIDR-219ENST00000522321 TXNRD1Q16881 649 aa15.65■□□□□ 0.1
SPIDR-219ENST00000522321 KIF6Q6ZMV9 814 aa15.65■□□□□ 0.1
SPIDR-219ENST00000522321 LINC00116Q8NCU8 138 aa15.65■□□□□ 0.1
SPIDR-219ENST00000522321 ARXQ96QS3 562 aa15.65■□□□□ 0.1
SPIDR-219ENST00000522321 ZBTB1Q9Y2K1 713 aa15.65■□□□□ 0.1
SPIDR-219ENST00000522321 CNTNAP4Q9C0A0 1308 aa15.65■□□□□ 0.1
SPIDR-219ENST00000522321 CICQ96RK0 1608 aaPredicted RBP15.65■□□□□ 0.1
SPIDR-219ENST00000522321 KAT6BQ8WYB5 2073 aa15.64■□□□□ 0.09
SPIDR-219ENST00000522321 PROSER3Q2NL68 480 aa15.64■□□□□ 0.09
SPIDR-219ENST00000522321 ATF7IPQ6VMQ6 1270 aa15.64■□□□□ 0.09
SPIDR-219ENST00000522321 TNS1Q9HBL0 1735 aaKnown RBP15.64■□□□□ 0.09
SPIDR-219ENST00000522321 XAGE3Q8WTP9 111 aa15.63■□□□□ 0.09
SPIDR-219ENST00000522321 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
SPIDR-219ENST00000522321 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
SPIDR-219ENST00000522321 SPON1Q9HCB6 807 aa15.63■□□□□ 0.09
SPIDR-219ENST00000522321 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
SPIDR-219ENST00000522321 NBPF26B4DH59 902 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 GNPATO15228 680 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 TRIM27P14373 513 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 YY1P25490 414 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 IL6STP40189 918 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-219ENST00000522321 NBPF10Q6P3W6 841 aaKnown RBP15.62■□□□□ 0.09
SPIDR-219ENST00000522321 G2E3Q7L622 706 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
SPIDR-219ENST00000522321 NBPF15Q8N660 670 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 CLUAP1Q96AJ1 413 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 LY75O60449 1722 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 RNF123Q5XPI4 1314 aa15.62■□□□□ 0.09
SPIDR-219ENST00000522321 IRX6P78412 446 aaPredicted RBP15.61■□□□□ 0.09
SPIDR-219ENST00000522321 PDIA6Q15084 440 aa15.61■□□□□ 0.09
SPIDR-219ENST00000522321 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
SPIDR-219ENST00000522321 COPS6Q7L5N1 327 aa15.61■□□□□ 0.09
SPIDR-219ENST00000522321 RIC3Q7Z5B4 369 aa15.61■□□□□ 0.09
SPIDR-219ENST00000522321 A0A087WZG4 1122 aa15.6■□□□□ 0.09
SPIDR-219ENST00000522321 PDE3AQ14432 1141 aa15.6■□□□□ 0.09
SPIDR-219ENST00000522321 RC3H1Q5TC82 1133 aaKnown RBP15.6■□□□□ 0.09
SPIDR-219ENST00000522321 INTS5Q6P9B9 1019 aaKnown RBP15.6■□□□□ 0.09
SPIDR-219ENST00000522321 RTCBQ9Y3I0 505 aaKnown RBP15.6■□□□□ 0.09
SPIDR-219ENST00000522321 COL15A1P39059 1388 aa15.6■□□□□ 0.09
SPIDR-219ENST00000522321 NEXNQ0ZGT2 675 aa15.59■□□□□ 0.09
SPIDR-219ENST00000522321 ITPRIPQ8IWB1 547 aa15.59■□□□□ 0.09
SPIDR-219ENST00000522321 PANK1Q8TE04 598 aa15.59■□□□□ 0.09
SPIDR-219ENST00000522321 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
SPIDR-219ENST00000522321 RGPD3A6NKT7 1758 aaPredicted RBP15.59■□□□□ 0.09
SPIDR-219ENST00000522321 RGPD4Q7Z3J3 1758 aa15.59■□□□□ 0.09
SPIDR-219ENST00000522321 C4BP0C0L5 1744 aa15.58■□□□□ 0.08
SPIDR-219ENST00000522321 COL5A3P25940 1745 aaPredicted RBP15.58■□□□□ 0.08
SPIDR-219ENST00000522321 F6X3S4 739 aa15.58■□□□□ 0.08
SPIDR-219ENST00000522321 PHF14O94880 888 aa15.58■□□□□ 0.08
SPIDR-219ENST00000522321 KSR2Q6VAB6 950 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms