RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PRIM1P49642 420 aaKnown RBP16.75■□□□□ 0.27
CPNE3-205ENST00000522240 ZNF496Q96IT1 587 aaPredicted RBP16.75■□□□□ 0.27
CPNE3-205ENST00000522240 BTAF1O14981 1849 aa16.75■□□□□ 0.27
CPNE3-205ENST00000522240 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
CPNE3-205ENST00000522240 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
CPNE3-205ENST00000522240 KRT27Q7Z3Y8 459 aa16.74■□□□□ 0.27
CPNE3-205ENST00000522240 SNRPA1P09661 255 aaKnown RBP16.73■□□□□ 0.27
CPNE3-205ENST00000522240 MRPL50Q8N5N7 158 aaKnown RBP16.73■□□□□ 0.27
CPNE3-205ENST00000522240 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
CPNE3-205ENST00000522240 ACSBG1Q96GR2 724 aa16.73■□□□□ 0.27
CPNE3-205ENST00000522240 BCL2L13Q9BXK5 485 aa16.73■□□□□ 0.27
CPNE3-205ENST00000522240 ATG3Q9NT62 314 aa16.73■□□□□ 0.27
CPNE3-205ENST00000522240 TJP1Q07157 1748 aa16.73■□□□□ 0.27
CPNE3-205ENST00000522240 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
CPNE3-205ENST00000522240 STK31Q9BXU1 1019 aa16.72■□□□□ 0.27
CPNE3-205ENST00000522240 ABCB7O75027 752 aa16.71■□□□□ 0.27
CPNE3-205ENST00000522240 DEFB132Q7Z7B7 95 aa16.71■□□□□ 0.27
CPNE3-205ENST00000522240 SMARCC1Q92922 1105 aaPredicted RBP16.71■□□□□ 0.27
CPNE3-205ENST00000522240 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.27
CPNE3-205ENST00000522240 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
CPNE3-205ENST00000522240 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
CPNE3-205ENST00000522240 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
CPNE3-205ENST00000522240 KAT6BQ8WYB5 2073 aa16.69■□□□□ 0.26
CPNE3-205ENST00000522240 PALLDQ8WX93 1383 aa16.69■□□□□ 0.26
CPNE3-205ENST00000522240 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
CPNE3-205ENST00000522240 PDE3AQ14432 1141 aa16.69■□□□□ 0.26
CPNE3-205ENST00000522240 ZKSCAN2Q63HK3 967 aa16.69■□□□□ 0.26
CPNE3-205ENST00000522240 ARHGAP45Q92619 1136 aa16.69■□□□□ 0.26
CPNE3-205ENST00000522240 LY75O60449 1722 aa16.69■□□□□ 0.26
CPNE3-205ENST00000522240 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
CPNE3-205ENST00000522240 PTPRCP08575 1304 aa16.69■□□□□ 0.26
CPNE3-205ENST00000522240 KCNQ2O43526 872 aa16.68■□□□□ 0.26
CPNE3-205ENST00000522240 MS4A1P11836 297 aa16.68■□□□□ 0.26
CPNE3-205ENST00000522240 TEX13AQ9BXU3 409 aaPredicted RBP16.68■□□□□ 0.26
CPNE3-205ENST00000522240 RREB1Q92766 1687 aa16.68■□□□□ 0.26
CPNE3-205ENST00000522240 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
CPNE3-205ENST00000522240 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
CPNE3-205ENST00000522240 PLIN1O60240 522 aa16.67■□□□□ 0.26
CPNE3-205ENST00000522240 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
CPNE3-205ENST00000522240 BAG6P46379 1132 aa16.67■□□□□ 0.26
CPNE3-205ENST00000522240 ATF7IPQ6VMQ6 1270 aa16.67■□□□□ 0.26
CPNE3-205ENST00000522240 FRAT1Q92837 279 aaPredicted RBP16.67■□□□□ 0.26
CPNE3-205ENST00000522240 DBF4Q9UBU7 674 aaPredicted RBP16.67■□□□□ 0.26
CPNE3-205ENST00000522240 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
CPNE3-205ENST00000522240 EIF2S2P20042 333 aaKnown RBP16.66■□□□□ 0.26
CPNE3-205ENST00000522240 FAM182BQ5T319 152 aa16.66■□□□□ 0.26
CPNE3-205ENST00000522240 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
CPNE3-205ENST00000522240 API5Q9BZZ5 524 aaKnown RBP16.66■□□□□ 0.26
CPNE3-205ENST00000522240 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
CPNE3-205ENST00000522240 CHPF2Q9P2E5 772 aa16.66■□□□□ 0.26
CPNE3-205ENST00000522240 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
CPNE3-205ENST00000522240 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
CPNE3-205ENST00000522240 TRIM27P14373 513 aa16.65■□□□□ 0.26
CPNE3-205ENST00000522240 RBM42Q9BTD8 480 aaKnown RBP16.65■□□□□ 0.26
CPNE3-205ENST00000522240 DDX21Q9NR30 783 aaKnown RBP eCLIP16.65■□□□□ 0.26
CPNE3-205ENST00000522240 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
CPNE3-205ENST00000522240 RGPD3A6NKT7 1758 aaPredicted RBP16.64■□□□□ 0.25
CPNE3-205ENST00000522240 RGPD4Q7Z3J3 1758 aa16.64■□□□□ 0.25
CPNE3-205ENST00000522240 LRP5O75197 1615 aa16.64■□□□□ 0.25
CPNE3-205ENST00000522240 VASPP50552 380 aaPredicted RBP16.64■□□□□ 0.25
CPNE3-205ENST00000522240 FLIIQ13045 1269 aa16.64■□□□□ 0.25
CPNE3-205ENST00000522240 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
CPNE3-205ENST00000522240 HYPKQ9NX55 129 aa16.64■□□□□ 0.25
CPNE3-205ENST00000522240 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
CPNE3-205ENST00000522240 ABCC4O15439 1325 aa16.64■□□□□ 0.25
CPNE3-205ENST00000522240 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
CPNE3-205ENST00000522240 SIK1P57059 783 aa16.63■□□□□ 0.25
CPNE3-205ENST00000522240 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
CPNE3-205ENST00000522240 DZIP1LQ8IYY4 767 aaKnown RBP16.63■□□□□ 0.25
CPNE3-205ENST00000522240 SLC4A9Q96Q91 983 aa16.63■□□□□ 0.25
CPNE3-205ENST00000522240 STARD3NLO95772 234 aa16.62■□□□□ 0.25
CPNE3-205ENST00000522240 PDIA6Q15084 440 aa16.62■□□□□ 0.25
CPNE3-205ENST00000522240 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
CPNE3-205ENST00000522240 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
CPNE3-205ENST00000522240 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
CPNE3-205ENST00000522240 G2E3Q7L622 706 aa16.61■□□□□ 0.25
CPNE3-205ENST00000522240 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
CPNE3-205ENST00000522240 GTF3C3Q9Y5Q9 886 aa16.61■□□□□ 0.25
CPNE3-205ENST00000522240 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
CPNE3-205ENST00000522240 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
CPNE3-205ENST00000522240 PTF1AQ7RTS3 328 aa16.6■□□□□ 0.25
CPNE3-205ENST00000522240 TNNQ9UQP3 1299 aa16.6■□□□□ 0.25
CPNE3-205ENST00000522240 TAF1LQ8IZX4 1826 aa16.6■□□□□ 0.25
CPNE3-205ENST00000522240 RLBP1P12271 317 aa16.59■□□□□ 0.25
CPNE3-205ENST00000522240 ATP6V1AP38606 617 aa16.59■□□□□ 0.25
CPNE3-205ENST00000522240 FKBP5Q13451 457 aaPredicted RBP16.59■□□□□ 0.25
CPNE3-205ENST00000522240 CRBNQ96SW2 442 aa16.59■□□□□ 0.25
CPNE3-205ENST00000522240 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
CPNE3-205ENST00000522240 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
CPNE3-205ENST00000522240 ANXA1P04083 346 aa16.58■□□□□ 0.24
CPNE3-205ENST00000522240 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
CPNE3-205ENST00000522240 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
CPNE3-205ENST00000522240 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
CPNE3-205ENST00000522240 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
CPNE3-205ENST00000522240 ATP10DQ9P241 1426 aa16.58■□□□□ 0.24
CPNE3-205ENST00000522240 ADCY9O60503 1353 aa16.57■□□□□ 0.24
CPNE3-205ENST00000522240 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
CPNE3-205ENST00000522240 TRIM37O94972 964 aa16.57■□□□□ 0.24
CPNE3-205ENST00000522240 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
CPNE3-205ENST00000522240 ITPK1Q13572 414 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms