RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
CNOT8-220ENST00000522139 PSMA6P60900 246 aaKnown RBP8.78□□□□□ -1
CNOT8-220ENST00000522139 ECM1Q16610 540 aa8.78□□□□□ -1
CNOT8-220ENST00000522139 ZNF787Q6DD87 383 aa8.78□□□□□ -1
CNOT8-220ENST00000522139 NPM2Q86SE8 214 aaKnown RBP8.78□□□□□ -1
CNOT8-220ENST00000522139 MEIOBQ8N635 442 aa8.78□□□□□ -1
CNOT8-220ENST00000522139 C2orf49Q9BVC5 232 aaPredicted RBP8.78□□□□□ -1
CNOT8-220ENST00000522139 GLYCTKQ8IVS8 523 aa8.77□□□□□ -1.01
CNOT8-220ENST00000522139 ZNF295-AS1Q8N0V1 137 aa8.77□□□□□ -1.01
CNOT8-220ENST00000522139 SAP130Q9H0E3 1048 aa8.77□□□□□ -1.01
CNOT8-220ENST00000522139 ATP13A2Q9NQ11 1180 aa8.77□□□□□ -1.01
CNOT8-220ENST00000522139 FKBP4Q02790 459 aaKnown RBP eCLIP8.76□□□□□ -1.01
CNOT8-220ENST00000522139 SH3PXD2AQ5TCZ1 1133 aa8.76□□□□□ -1.01
CNOT8-220ENST00000522139 NBPF15Q8N660 670 aa8.76□□□□□ -1.01
CNOT8-220ENST00000522139 CABP1Q9NZU7 370 aa8.76□□□□□ -1.01
CNOT8-220ENST00000522139 DACH1Q9UI36 760 aa8.76□□□□□ -1.01
CNOT8-220ENST00000522139 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
CNOT8-220ENST00000522139 PARP3Q9Y6F1 533 aa8.76□□□□□ -1.01
CNOT8-220ENST00000522139 NPR3P17342 541 aa8.75□□□□□ -1.01
CNOT8-220ENST00000522139 SF3B2Q13435 895 aaKnown RBP8.75□□□□□ -1.01
CNOT8-220ENST00000522139 TEAD4Q15561 434 aa8.75□□□□□ -1.01
CNOT8-220ENST00000522139 TMEM214Q6NUQ4 689 aaKnown RBP8.75□□□□□ -1.01
CNOT8-220ENST00000522139 DNAJC14Q6Y2X3 702 aaPredicted RBP8.75□□□□□ -1.01
CNOT8-220ENST00000522139 PPARGC1BQ86YN6 1023 aaKnown RBP8.75□□□□□ -1.01
CNOT8-220ENST00000522139 HELQQ8TDG4 1101 aa8.75□□□□□ -1.01
CNOT8-220ENST00000522139 ZDHHC1Q8WTX9 485 aa8.75□□□□□ -1.01
CNOT8-220ENST00000522139 ZSCAN10Q96SZ4 725 aaPredicted RBP8.75□□□□□ -1.01
CNOT8-220ENST00000522139 INSM2Q96T92 566 aaPredicted RBP8.75□□□□□ -1.01
CNOT8-220ENST00000522139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.75□□□□□ -1.01
CNOT8-220ENST00000522139 SERTM1A2A2V5 107 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 EML1O00423 815 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 NOS2P35228 1153 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 MARSP56192 900 aaKnown RBP8.74□□□□□ -1.01
CNOT8-220ENST00000522139 COX20Q5RI15 118 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 C16orf46Q6P387 395 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 NGLY1Q96IV0 654 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 TSEN34Q9BSV6 310 aaKnown RBP8.74□□□□□ -1.01
CNOT8-220ENST00000522139 SENP2Q9HC62 589 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 HCN4Q9Y3Q4 1203 aa8.74□□□□□ -1.01
CNOT8-220ENST00000522139 HIRAP54198 1017 aaPredicted RBP8.73□□□□□ -1.01
CNOT8-220ENST00000522139 SLC27A3Q5K4L6 730 aa8.73□□□□□ -1.01
CNOT8-220ENST00000522139 L3MBTL2Q969R5 705 aa8.73□□□□□ -1.01
CNOT8-220ENST00000522139 GRIP2Q9C0E4 1043 aa8.73□□□□□ -1.01
CNOT8-220ENST00000522139 QTRT2Q9H974 415 aaKnown RBP8.73□□□□□ -1.01
CNOT8-220ENST00000522139 GMPR2Q9P2T1 348 aaKnown RBP8.73□□□□□ -1.01
CNOT8-220ENST00000522139 AMOTL2Q9Y2J4 779 aa8.73□□□□□ -1.01
CNOT8-220ENST00000522139 SPINT1O43278 529 aa8.72□□□□□ -1.01
CNOT8-220ENST00000522139 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
CNOT8-220ENST00000522139 NOM1Q5C9Z4 860 aaKnown RBP8.72□□□□□ -1.01
CNOT8-220ENST00000522139 LINC00528Q8N1L1 170 aa8.72□□□□□ -1.01
CNOT8-220ENST00000522139 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
CNOT8-220ENST00000522139 NIFKQ9BYG3 293 aaKnown RBP8.72□□□□□ -1.01
CNOT8-220ENST00000522139 POLMQ9NP87 494 aaPredicted RBP8.72□□□□□ -1.01
CNOT8-220ENST00000522139 UPP2O95045 317 aa8.71□□□□□ -1.02
CNOT8-220ENST00000522139 ERCC3P19447 782 aa8.71□□□□□ -1.02
CNOT8-220ENST00000522139 MPSTP25325 297 aa8.71□□□□□ -1.02
CNOT8-220ENST00000522139 CTSOP43234 321 aaPredicted RBP8.71□□□□□ -1.02
CNOT8-220ENST00000522139 RNF144AP50876 292 aaPredicted RBP8.71□□□□□ -1.02
CNOT8-220ENST00000522139 ARHGAP4P98171 946 aa8.71□□□□□ -1.02
CNOT8-220ENST00000522139 C6orf118Q5T5N4 469 aa8.71□□□□□ -1.02
CNOT8-220ENST00000522139 ALDH16A1Q8IZ83 802 aa8.71□□□□□ -1.02
CNOT8-220ENST00000522139 RHBDD1Q8TEB9 315 aa8.71□□□□□ -1.02
CNOT8-220ENST00000522139 LRFN2Q9ULH4 789 aa8.71□□□□□ -1.02
CNOT8-220ENST00000522139 POTECB2RU33 542 aa8.7□□□□□ -1.02
CNOT8-220ENST00000522139 C11orf95C9JLR9 678 aaPredicted RBP8.7□□□□□ -1.02
CNOT8-220ENST00000522139 TNFRSF10BO14763 440 aa8.7□□□□□ -1.02
CNOT8-220ENST00000522139 BMP1P13497 986 aa8.7□□□□□ -1.02
CNOT8-220ENST00000522139 GPC1P35052 558 aa8.7□□□□□ -1.02
CNOT8-220ENST00000522139 GNASQ5JWF2 1037 aa8.7□□□□□ -1.02
CNOT8-220ENST00000522139 ZNF428Q96B54 188 aa8.7□□□□□ -1.02
CNOT8-220ENST00000522139 MYO19Q96H55 970 aa8.7□□□□□ -1.02
CNOT8-220ENST00000522139 TRIM47Q96LD4 638 aa8.7□□□□□ -1.02
CNOT8-220ENST00000522139 FAM13AO94988 1023 aa8.69□□□□□ -1.02
CNOT8-220ENST00000522139 BMP2P12643 396 aa8.69□□□□□ -1.02
CNOT8-220ENST00000522139 SCARF1Q14162 830 aa8.69□□□□□ -1.02
CNOT8-220ENST00000522139 C4orf17Q53FE4 359 aa8.69□□□□□ -1.02
CNOT8-220ENST00000522139 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
CNOT8-220ENST00000522139 TRIM46Q7Z4K8 759 aa8.69□□□□□ -1.02
CNOT8-220ENST00000522139 PHACTR1Q9C0D0 580 aa8.69□□□□□ -1.02
CNOT8-220ENST00000522139 MAPK1P28482 360 aa8.68□□□□□ -1.02
CNOT8-220ENST00000522139 PHKA2P46019 1235 aa8.68□□□□□ -1.02
CNOT8-220ENST00000522139 PLA2G4AP47712 749 aa8.68□□□□□ -1.02
CNOT8-220ENST00000522139 STIM2Q9P246 746 aa8.68□□□□□ -1.02
CNOT8-220ENST00000522139 TXLNAP40222 546 aa8.67□□□□□ -1.02
CNOT8-220ENST00000522139 RTN1Q16799 776 aa8.67□□□□□ -1.02
CNOT8-220ENST00000522139 FAM26DQ5JW98 314 aa8.67□□□□□ -1.02
CNOT8-220ENST00000522139 DCTN4Q9UJW0 460 aa8.67□□□□□ -1.02
CNOT8-220ENST00000522139 ANKRD33BA6NCL7 494 aa8.66□□□□□ -1.02
CNOT8-220ENST00000522139 RBM25P49756 843 aaKnown RBP8.66□□□□□ -1.02
CNOT8-220ENST00000522139 POU4F2Q12837 409 aa8.66□□□□□ -1.02
CNOT8-220ENST00000522139 DGKZQ13574 1117 aa8.66□□□□□ -1.02
CNOT8-220ENST00000522139 PRICKLE2Q7Z3G6 844 aa8.66□□□□□ -1.02
CNOT8-220ENST00000522139 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
CNOT8-220ENST00000522139 KLK14Q9P0G3 267 aa8.66□□□□□ -1.02
CNOT8-220ENST00000522139 ZBTB39O15060 712 aa8.65□□□□□ -1.02
CNOT8-220ENST00000522139 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.02
CNOT8-220ENST00000522139 RANGAP1P46060 587 aaPredicted RBP8.65□□□□□ -1.02
CNOT8-220ENST00000522139 EIF1AXP47813 144 aaKnown RBP8.65□□□□□ -1.02
CNOT8-220ENST00000522139 AAMPQ13685 434 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms