RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
SGCE-211ENST00000522045 GALNT6Q8NCL4 622 aa11.1□□□□□ -0.63
SGCE-211ENST00000522045 ZCCHC2Q9C0B9 1178 aaKnown RBP11.1□□□□□ -0.63
SGCE-211ENST00000522045 DNAAF2Q9NVR5 837 aaKnown RBP11.1□□□□□ -0.63
SGCE-211ENST00000522045 ZDHHC3Q9NYG2 299 aa11.1□□□□□ -0.63
SGCE-211ENST00000522045 CABP1Q9NZU7 370 aa11.1□□□□□ -0.63
SGCE-211ENST00000522045 PCDHGC4Q9Y5F7 938 aa11.1□□□□□ -0.63
SGCE-211ENST00000522045 USP17L5A8MUK1 530 aa11.09□□□□□ -0.63
SGCE-211ENST00000522045 SHISA8B8ZZ34 492 aa11.08□□□□□ -0.64
SGCE-211ENST00000522045 CTBSQ01459 385 aa11.08□□□□□ -0.64
SGCE-211ENST00000522045 EDARADDQ8WWZ3 215 aa11.08□□□□□ -0.64
SGCE-211ENST00000522045 USP3Q9Y6I4 520 aa11.08□□□□□ -0.64
SGCE-211ENST00000522045 A0A1W2PNR3 127 aa11.07□□□□□ -0.64
SGCE-211ENST00000522045 C2CD2LO14523 706 aa11.07□□□□□ -0.64
SGCE-211ENST00000522045 ATXN7O15265 892 aaPredicted RBP11.07□□□□□ -0.64
SGCE-211ENST00000522045 SLCO4C1Q6ZQN7 724 aa11.07□□□□□ -0.64
SGCE-211ENST00000522045 C1orf229Q6ZS94 237 aaPredicted RBP11.07□□□□□ -0.64
SGCE-211ENST00000522045 DEPDC4Q8N2C3 294 aa11.07□□□□□ -0.64
SGCE-211ENST00000522045 ZNF358Q9NW07 568 aa11.07□□□□□ -0.64
SGCE-211ENST00000522045 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
SGCE-211ENST00000522045 DCAF5Q96JK2 942 aa11.06□□□□□ -0.64
SGCE-211ENST00000522045 GGA1Q9UJY5 639 aa11.06□□□□□ -0.64
SGCE-211ENST00000522045 POM121CA8CG34 1229 aa11.05□□□□□ -0.64
SGCE-211ENST00000522045 TRIM50Q86XT4 487 aa11.05□□□□□ -0.64
SGCE-211ENST00000522045 RRAGCQ9HB90 399 aa11.05□□□□□ -0.64
SGCE-211ENST00000522045 SCHIP1Q9P0W5 487 aaPredicted RBP11.05□□□□□ -0.64
SGCE-211ENST00000522045 MKL2Q9ULH7 1088 aa11.05□□□□□ -0.64
SGCE-211ENST00000522045 GJA3Q9Y6H8 435 aa11.05□□□□□ -0.64
SGCE-211ENST00000522045 DCDC2BA2VCK2 349 aa11.04□□□□□ -0.64
SGCE-211ENST00000522045 ARAFP10398 606 aa11.04□□□□□ -0.64
SGCE-211ENST00000522045 SNRPNP63162 240 aaKnown RBP11.04□□□□□ -0.64
SGCE-211ENST00000522045 AMPD1P23109 780 aa11.03□□□□□ -0.64
SGCE-211ENST00000522045 SUZ12Q15022 739 aaKnown RBP11.03□□□□□ -0.64
SGCE-211ENST00000522045 BICDL1Q6ZP65 573 aa11.03□□□□□ -0.64
SGCE-211ENST00000522045 PLEKHM2Q8IWE5 1019 aa11.03□□□□□ -0.64
SGCE-211ENST00000522045 ADAMTS19Q8TE59 1207 aa11.03□□□□□ -0.64
SGCE-211ENST00000522045 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
SGCE-211ENST00000522045 PARP3Q9Y6F1 533 aa11.03□□□□□ -0.64
SGCE-211ENST00000522045 KHNYNO15037 678 aaKnown RBP11.02□□□□□ -0.65
SGCE-211ENST00000522045 MAPTP10636 758 aaKnown RBP11.02□□□□□ -0.65
SGCE-211ENST00000522045 ATP1A2P50993 1020 aa11.02□□□□□ -0.65
SGCE-211ENST00000522045 TNP2Q05952 138 aa11.02□□□□□ -0.65
SGCE-211ENST00000522045 PLA2G4EQ3MJ16 856 aa11.02□□□□□ -0.65
SGCE-211ENST00000522045 FAM182BQ5T319 152 aa11.02□□□□□ -0.65
SGCE-211ENST00000522045 USP17L3A6NCW0 530 aa11.01□□□□□ -0.65
SGCE-211ENST00000522045 USP17L4A6NCW7 530 aa11.01□□□□□ -0.65
SGCE-211ENST00000522045 FAM157BP0CG42 384 aa11.01□□□□□ -0.65
SGCE-211ENST00000522045 HDGFL1Q5TGJ6 251 aa11.01□□□□□ -0.65
SGCE-211ENST00000522045 USP17L2Q6R6M4 530 aa11.01□□□□□ -0.65
SGCE-211ENST00000522045 USP17L1Q7RTZ2 530 aa11.01□□□□□ -0.65
SGCE-211ENST00000522045 NEURL1BA8MQ27 555 aa11□□□□□ -0.65
SGCE-211ENST00000522045 EPXP11678 715 aa11□□□□□ -0.65
SGCE-211ENST00000522045 CD33P20138 364 aa11□□□□□ -0.65
SGCE-211ENST00000522045 EPHA4P54764 986 aa11□□□□□ -0.65
SGCE-211ENST00000522045 TEAD4Q15561 434 aa11□□□□□ -0.65
SGCE-211ENST00000522045 SAMD5Q5TGI4 173 aa11□□□□□ -0.65
SGCE-211ENST00000522045 SLC9A9Q8IVB4 645 aa11□□□□□ -0.65
SGCE-211ENST00000522045 ZDHHC1Q8WTX9 485 aa11□□□□□ -0.65
SGCE-211ENST00000522045 L3MBTL2Q969R5 705 aa11□□□□□ -0.65
SGCE-211ENST00000522045 UCN2Q96RP3 112 aa11□□□□□ -0.65
SGCE-211ENST00000522045 ATP9BO43861 1147 aa10.99□□□□□ -0.65
SGCE-211ENST00000522045 TXLNAP40222 546 aa10.99□□□□□ -0.65
SGCE-211ENST00000522045 TPCN2Q8NHX9 752 aa10.99□□□□□ -0.65
SGCE-211ENST00000522045 AVENQ9NQS1 362 aaPredicted RBP10.99□□□□□ -0.65
SGCE-211ENST00000522045 PIK3R2O00459 728 aa10.98□□□□□ -0.65
SGCE-211ENST00000522045 MSTNO14793 375 aa10.98□□□□□ -0.65
SGCE-211ENST00000522045 ADH6P28332 368 aa10.98□□□□□ -0.65
SGCE-211ENST00000522045 NOS2P35228 1153 aa10.98□□□□□ -0.65
SGCE-211ENST00000522045 CCDC102BQ68D86 513 aa10.98□□□□□ -0.65
SGCE-211ENST00000522045 ALYREFQ86V81 257 aaKnown RBP10.98□□□□□ -0.65
SGCE-211ENST00000522045 TNS4Q8IZW8 715 aa10.98□□□□□ -0.65
SGCE-211ENST00000522045 ZNF232Q9UNY5 417 aa10.98□□□□□ -0.65
SGCE-211ENST00000522045 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
SGCE-211ENST00000522045 CLDN10P78369 228 aa10.96□□□□□ -0.65
SGCE-211ENST00000522045 TBCELQ5QJ74 424 aa10.96□□□□□ -0.65
SGCE-211ENST00000522045 BTBD6Q96KE9 485 aa10.96□□□□□ -0.65
SGCE-211ENST00000522045 MARK1Q9P0L2 795 aa10.96□□□□□ -0.65
SGCE-211ENST00000522045 HCN2Q9UL51 889 aa10.96□□□□□ -0.65
SGCE-211ENST00000522045 GPC6Q9Y625 555 aaPredicted RBP10.96□□□□□ -0.65
SGCE-211ENST00000522045 SERTM1A2A2V5 107 aa10.95□□□□□ -0.66
SGCE-211ENST00000522045 EML1O00423 815 aa10.95□□□□□ -0.66
SGCE-211ENST00000522045 ZBTB7BO15156 539 aaPredicted RBP10.95□□□□□ -0.66
SGCE-211ENST00000522045 LAMC2Q13753 1193 aa10.95□□□□□ -0.66
SGCE-211ENST00000522045 LARGE2Q8N3Y3 721 aa10.95□□□□□ -0.66
SGCE-211ENST00000522045 OGFOD1Q8N543 542 aa10.95□□□□□ -0.66
SGCE-211ENST00000522045 SPOCK3Q9BQ16 436 aa10.95□□□□□ -0.66
SGCE-211ENST00000522045 PRR12Q9ULL5 1215 aa10.95□□□□□ -0.66
SGCE-211ENST00000522045 PALM3A6NDB9 673 aaPredicted RBP10.94□□□□□ -0.66
SGCE-211ENST00000522045 GNB5O14775 395 aa10.94□□□□□ -0.66
SGCE-211ENST00000522045 EFSO43281 561 aa10.94□□□□□ -0.66
SGCE-211ENST00000522045 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
SGCE-211ENST00000522045 TMEM132AQ24JP5 1023 aa10.94□□□□□ -0.66
SGCE-211ENST00000522045 NEUROD4Q9HD90 331 aa10.94□□□□□ -0.66
SGCE-211ENST00000522045 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
SGCE-211ENST00000522045 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
SGCE-211ENST00000522045 ITGB2P05107 769 aa10.93□□□□□ -0.66
SGCE-211ENST00000522045 PSMA6P60900 246 aaKnown RBP10.93□□□□□ -0.66
SGCE-211ENST00000522045 ZNF468Q5VIY5 522 aaPredicted RBP10.93□□□□□ -0.66
SGCE-211ENST00000522045 LINC00114Q6XXX2 140 aa10.93□□□□□ -0.66
SGCE-211ENST00000522045 LRRC69Q6ZNQ3 347 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms