RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 ERVV-2B6SEH9 535 aa12.23□□□□□ -0.45
SHPRH-209ENST00000521977 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-209ENST00000521977 HOXB7P09629 217 aa12.23□□□□□ -0.45
SHPRH-209ENST00000521977 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
SHPRH-209ENST00000521977 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
SHPRH-209ENST00000521977 TOGARAM1Q9Y4F4 1720 aa12.22□□□□□ -0.45
SHPRH-209ENST00000521977 EXOC5O00471 708 aa12.21□□□□□ -0.45
SHPRH-209ENST00000521977 KCNQ3O43525 872 aa12.21□□□□□ -0.45
SHPRH-209ENST00000521977 NFATC2IPQ8NCF5 419 aa12.21□□□□□ -0.45
SHPRH-209ENST00000521977 EXOC6Q8TAG9 804 aa12.21□□□□□ -0.45
SHPRH-209ENST00000521977 DDX54Q8TDD1 881 aaKnown RBP12.21□□□□□ -0.45
SHPRH-209ENST00000521977 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.45
SHPRH-209ENST00000521977 PPP4R2Q9NY27 417 aa12.21□□□□□ -0.45
SHPRH-209ENST00000521977 PAPPAQ13219 1627 aa12.2□□□□□ -0.46
SHPRH-209ENST00000521977 ZKSCAN2Q63HK3 967 aa12.2□□□□□ -0.46
SHPRH-209ENST00000521977 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
SHPRH-209ENST00000521977 ARHGAP45Q92619 1136 aa12.2□□□□□ -0.46
SHPRH-209ENST00000521977 FRAT1Q92837 279 aaPredicted RBP12.2□□□□□ -0.46
SHPRH-209ENST00000521977 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
SHPRH-209ENST00000521977 USP21Q9UK80 565 aa12.2□□□□□ -0.46
SHPRH-209ENST00000521977 NOB1Q9ULX3 412 aaKnown RBP12.2□□□□□ -0.46
SHPRH-209ENST00000521977 ATRNO75882 1429 aa12.2□□□□□ -0.46
SHPRH-209ENST00000521977 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
SHPRH-209ENST00000521977 CABP4P57796 275 aa12.19□□□□□ -0.46
SHPRH-209ENST00000521977 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
SHPRH-209ENST00000521977 ATF7IPQ6VMQ6 1270 aa12.19□□□□□ -0.46
SHPRH-209ENST00000521977 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
SHPRH-209ENST00000521977 TRPC6Q9Y210 931 aa12.19□□□□□ -0.46
SHPRH-209ENST00000521977 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
SHPRH-209ENST00000521977 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
SHPRH-209ENST00000521977 GLI3P10071 1580 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 AFF2P51816 1311 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 MS4A1P11836 297 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 RLBP1P12271 317 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 TRIM27P14373 513 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 CANXP27824 592 aaKnown RBP12.18□□□□□ -0.46
SHPRH-209ENST00000521977 DDB1Q16531 1140 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 TNNQ9UQP3 1299 aa12.18□□□□□ -0.46
SHPRH-209ENST00000521977 TTLL13PA6NNM8 815 aa12.17□□□□□ -0.46
SHPRH-209ENST00000521977 GIGYF1O75420 1035 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-209ENST00000521977 SLC39A6Q13433 755 aa12.17□□□□□ -0.46
SHPRH-209ENST00000521977 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
SHPRH-209ENST00000521977 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
SHPRH-209ENST00000521977 CCDC9Q9Y3X0 531 aaKnown RBP12.17□□□□□ -0.46
SHPRH-209ENST00000521977 ITGB4P16144 1822 aa12.16□□□□□ -0.46
SHPRH-209ENST00000521977 PTPRCP08575 1304 aa12.16□□□□□ -0.46
SHPRH-209ENST00000521977 TCERG1O14776 1098 aaKnown RBP12.16□□□□□ -0.46
SHPRH-209ENST00000521977 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
SHPRH-209ENST00000521977 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
SHPRH-209ENST00000521977 RGS12O14924 1447 aa12.16□□□□□ -0.46
SHPRH-209ENST00000521977 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
SHPRH-209ENST00000521977 ABCC4O15439 1325 aa12.15□□□□□ -0.46
SHPRH-209ENST00000521977 BCL9O00512 1426 aa12.15□□□□□ -0.46
SHPRH-209ENST00000521977 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-209ENST00000521977 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
SHPRH-209ENST00000521977 HDGFL1Q5TGJ6 251 aa12.15□□□□□ -0.46
SHPRH-209ENST00000521977 MAMSTRQ6ZN01 415 aa12.15□□□□□ -0.46
SHPRH-209ENST00000521977 IFNL1Q8IU54 200 aa12.15□□□□□ -0.46
SHPRH-209ENST00000521977 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-209ENST00000521977 ZNF496Q96IT1 587 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-209ENST00000521977 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-209ENST00000521977 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
SHPRH-209ENST00000521977 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
SHPRH-209ENST00000521977 C5P01031 1676 aa12.15□□□□□ -0.46
SHPRH-209ENST00000521977 AAMPQ13685 434 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 GSE1Q14687 1217 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
SHPRH-209ENST00000521977 FTSJ3Q8IY81 847 aaKnown RBP12.14□□□□□ -0.47
SHPRH-209ENST00000521977 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 PIGBQ92521 554 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 STK31Q9BXU1 1019 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
SHPRH-209ENST00000521977 SNRPA1P09661 255 aaKnown RBP12.13□□□□□ -0.47
SHPRH-209ENST00000521977 IER5LQ5T953 404 aa12.13□□□□□ -0.47
SHPRH-209ENST00000521977 TMEM57Q8N5G2 664 aa12.13□□□□□ -0.47
SHPRH-209ENST00000521977 TMOD3Q9NYL9 352 aa12.13□□□□□ -0.47
SHPRH-209ENST00000521977 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
SHPRH-209ENST00000521977 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
SHPRH-209ENST00000521977 G2E3Q7L622 706 aa12.12□□□□□ -0.47
SHPRH-209ENST00000521977 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
SHPRH-209ENST00000521977 EIF2S2P20042 333 aaKnown RBP12.11□□□□□ -0.47
SHPRH-209ENST00000521977 FLIIQ13045 1269 aa12.11□□□□□ -0.47
SHPRH-209ENST00000521977 PDIA6Q15084 440 aa12.11□□□□□ -0.47
SHPRH-209ENST00000521977 B4GALNT3Q6L9W6 998 aa12.11□□□□□ -0.47
SHPRH-209ENST00000521977 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
SHPRH-209ENST00000521977 ATG3Q9NT62 314 aa12.11□□□□□ -0.47
SHPRH-209ENST00000521977 CHPF2Q9P2E5 772 aa12.11□□□□□ -0.47
SHPRH-209ENST00000521977 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
SHPRH-209ENST00000521977 DDX19BQ9UMR2 479 aa12.11□□□□□ -0.47
SHPRH-209ENST00000521977 INTS3Q68E01 1043 aaKnown RBP12.1□□□□□ -0.47
SHPRH-209ENST00000521977 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
SHPRH-209ENST00000521977 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
SHPRH-209ENST00000521977 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
SHPRH-209ENST00000521977 ASAP1Q9ULH1 1129 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms