RNA–Protein interactions for RNA: ENST00000521562.5

PTK2-233, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-233ENST00000521562 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
PTK2-233ENST00000521562 HTATSF1O43719 755 aaKnown RBP12.65□□□□□ -0.38
PTK2-233ENST00000521562 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTK2-233ENST00000521562 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
PTK2-233ENST00000521562 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
PTK2-233ENST00000521562 NLGN1Q8N2Q7 840 aa12.65□□□□□ -0.38
PTK2-233ENST00000521562 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
PTK2-233ENST00000521562 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
PTK2-233ENST00000521562 KDM3BQ7LBC6 1761 aa12.65□□□□□ -0.38
PTK2-233ENST00000521562 COL15A1P39059 1388 aa12.65□□□□□ -0.38
PTK2-233ENST00000521562 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
PTK2-233ENST00000521562 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
PTK2-233ENST00000521562 MIS18AQ9NYP9 233 aa12.64□□□□□ -0.39
PTK2-233ENST00000521562 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
PTK2-233ENST00000521562 C10orf71Q711Q0 1435 aa12.63□□□□□ -0.39
PTK2-233ENST00000521562 STARD3NLO95772 234 aa12.63□□□□□ -0.39
PTK2-233ENST00000521562 A1BGP04217 495 aa12.63□□□□□ -0.39
PTK2-233ENST00000521562 DDR1Q08345 913 aa12.63□□□□□ -0.39
PTK2-233ENST00000521562 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 AFDNP55196 1824 aaKnown RBP12.62□□□□□ -0.39
PTK2-233ENST00000521562 PXDNLA1KZ92 1463 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 ZPR1O75312 459 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 NEFMP07197 916 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 TM4SF1P30408 202 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 EIF5P55010 431 aaKnown RBP12.62□□□□□ -0.39
PTK2-233ENST00000521562 TAF7Q15545 349 aaPredicted RBP12.62□□□□□ -0.39
PTK2-233ENST00000521562 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 BCL2L12Q9HB09 334 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 USP16Q9Y5T5 823 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 PARP3Q9Y6F1 533 aa12.62□□□□□ -0.39
PTK2-233ENST00000521562 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
PTK2-233ENST00000521562 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
PTK2-233ENST00000521562 TEX13AQ9BXU3 409 aaPredicted RBP12.61□□□□□ -0.39
PTK2-233ENST00000521562 PNNQ9H307 717 aaKnown RBP12.61□□□□□ -0.39
PTK2-233ENST00000521562 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
PTK2-233ENST00000521562 BRCA1P38398 1863 aaKnown RBP12.61□□□□□ -0.39
PTK2-233ENST00000521562 LAMB4A4D0S4 1761 aa12.61□□□□□ -0.39
PTK2-233ENST00000521562 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
PTK2-233ENST00000521562 ADAMTS8Q9UP79 889 aa12.6□□□□□ -0.39
PTK2-233ENST00000521562 NRXN2Q9P2S2 1712 aa12.59□□□□□ -0.39
PTK2-233ENST00000521562 BCORQ6W2J9 1755 aa12.59□□□□□ -0.39
PTK2-233ENST00000521562 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
PTK2-233ENST00000521562 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
PTK2-233ENST00000521562 RIPK4P57078 832 aa12.59□□□□□ -0.39
PTK2-233ENST00000521562 NFIXQ14938 502 aa12.59□□□□□ -0.39
PTK2-233ENST00000521562 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
PTK2-233ENST00000521562 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
PTK2-233ENST00000521562 ZNF330Q9Y3S2 320 aaPredicted RBP12.59□□□□□ -0.39
PTK2-233ENST00000521562 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
PTK2-233ENST00000521562 SNRPA1P09661 255 aaKnown RBP12.58□□□□□ -0.4
PTK2-233ENST00000521562 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
PTK2-233ENST00000521562 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTK2-233ENST00000521562 A0A087WZG4 1122 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 NBPF26B4DH59 902 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 GRIN3BO60391 1043 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 DPEP1P16444 411 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 KCNA3P22001 575 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 TGFB2P61812 414 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 NEUROD2Q15784 382 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 NBPF10Q6P3W6 841 aaKnown RBP12.57□□□□□ -0.4
PTK2-233ENST00000521562 NBPF15Q8N660 670 aa12.57□□□□□ -0.4
PTK2-233ENST00000521562 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
PTK2-233ENST00000521562 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
PTK2-233ENST00000521562 TBC1D9BQ66K14 1250 aa12.56□□□□□ -0.4
PTK2-233ENST00000521562 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
PTK2-233ENST00000521562 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
PTK2-233ENST00000521562 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
PTK2-233ENST00000521562 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
PTK2-233ENST00000521562 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
PTK2-233ENST00000521562 SERPINB2P05120 415 aa12.55□□□□□ -0.4
PTK2-233ENST00000521562 ZNF784Q8NCA9 323 aaPredicted RBP12.55□□□□□ -0.4
PTK2-233ENST00000521562 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
PTK2-233ENST00000521562 CARMIL3Q8ND23 1372 aa12.55□□□□□ -0.4
PTK2-233ENST00000521562 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
PTK2-233ENST00000521562 CHRNA5P30532 468 aa12.54□□□□□ -0.4
PTK2-233ENST00000521562 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
PTK2-233ENST00000521562 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
PTK2-233ENST00000521562 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
PTK2-233ENST00000521562 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
PTK2-233ENST00000521562 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.41
PTK2-233ENST00000521562 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
PTK2-233ENST00000521562 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.41
PTK2-233ENST00000521562 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
PTK2-233ENST00000521562 NGEFQ8N5V2 710 aa12.51□□□□□ -0.41
PTK2-233ENST00000521562 NUP98P52948 1817 aa12.51□□□□□ -0.41
PTK2-233ENST00000521562 APAF1O14727 1248 aa12.5□□□□□ -0.41
PTK2-233ENST00000521562 MYL6BP14649 208 aa12.5□□□□□ -0.41
PTK2-233ENST00000521562 HLFQ16534 295 aa12.5□□□□□ -0.41
PTK2-233ENST00000521562 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
PTK2-233ENST00000521562 PRR5LQ6MZQ0 368 aa12.5□□□□□ -0.41
PTK2-233ENST00000521562 PIM2Q9P1W9 311 aa12.5□□□□□ -0.41
PTK2-233ENST00000521562 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
PTK2-233ENST00000521562 ADCY9O60503 1353 aa12.49□□□□□ -0.41
PTK2-233ENST00000521562 SENP3-EIF4A1A0A087X0R7 540 aa12.49□□□□□ -0.41
PTK2-233ENST00000521562 CHL1O00533 1208 aa12.49□□□□□ -0.41
PTK2-233ENST00000521562 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
PTK2-233ENST00000521562 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
PTK2-233ENST00000521562 BABAM1Q9NWV8 329 aa12.49□□□□□ -0.41
PTK2-233ENST00000521562 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms