RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 MYBBP1AQ9BQG0 1328 aaKnown RBP28.62■■■□□ 2.17
HOXA3-204ENST00000521401 COL15A1P39059 1388 aa28.62■■■□□ 2.17
HOXA3-204ENST00000521401 CANXP27824 592 aaKnown RBP28.61■■■□□ 2.17
HOXA3-204ENST00000521401 DDR1Q08345 913 aa28.61■■■□□ 2.17
HOXA3-204ENST00000521401 NARFQ9UHQ1 456 aa28.61■■■□□ 2.17
HOXA3-204ENST00000521401 PARP3Q9Y6F1 533 aa28.61■■■□□ 2.17
HOXA3-204ENST00000521401 C10orf71Q711Q0 1435 aa28.6■■■□□ 2.17
HOXA3-204ENST00000521401 GRIN3BO60391 1043 aa28.6■■■□□ 2.17
HOXA3-204ENST00000521401 TM4SF1P30408 202 aa28.6■■■□□ 2.17
HOXA3-204ENST00000521401 EIF5P55010 431 aaKnown RBP28.6■■■□□ 2.17
HOXA3-204ENST00000521401 ZPR1O75312 459 aa28.59■■■□□ 2.17
HOXA3-204ENST00000521401 NEFMP07197 916 aa28.59■■■□□ 2.17
HOXA3-204ENST00000521401 NFE2L2Q16236 605 aa28.59■■■□□ 2.17
HOXA3-204ENST00000521401 BCL2L12Q9HB09 334 aa28.59■■■□□ 2.17
HOXA3-204ENST00000521401 ZEB1P37275 1124 aaPredicted RBP28.57■■■□□ 2.16
HOXA3-204ENST00000521401 PNNQ9H307 717 aaKnown RBP28.57■■■□□ 2.16
HOXA3-204ENST00000521401 PXDNLA1KZ92 1463 aa28.57■■■□□ 2.16
HOXA3-204ENST00000521401 PRAMEF22A3QJZ6 481 aa28.56■■■□□ 2.16
HOXA3-204ENST00000521401 A1BGP04217 495 aa28.56■■■□□ 2.16
HOXA3-204ENST00000521401 TGFB2P61812 414 aa28.56■■■□□ 2.16
HOXA3-204ENST00000521401 TAF7Q15545 349 aaPredicted RBP28.56■■■□□ 2.16
HOXA3-204ENST00000521401 WWC3Q9ULE0 1092 aa28.56■■■□□ 2.16
HOXA3-204ENST00000521401 POLRMTO00411 1230 aaKnown RBP28.55■■■□□ 2.16
HOXA3-204ENST00000521401 USP16Q9Y5T5 823 aa28.55■■■□□ 2.16
HOXA3-204ENST00000521401 ZNF784Q8NCA9 323 aaPredicted RBP28.54■■■□□ 2.16
HOXA3-204ENST00000521401 PRKRIP1Q9H875 184 aaPredicted RBP28.54■■■□□ 2.16
HOXA3-204ENST00000521401 MIS18AQ9NYP9 233 aa28.54■■■□□ 2.16
HOXA3-204ENST00000521401 MAPK8IP3Q9UPT6 1336 aa28.53■■■□□ 2.16
HOXA3-204ENST00000521401 IL6STP40189 918 aaPredicted RBP28.53■■■□□ 2.16
HOXA3-204ENST00000521401 NFIXQ14938 502 aa28.53■■■□□ 2.16
HOXA3-204ENST00000521401 KIF13BQ9NQT8 1826 aa28.53■■■□□ 2.16
HOXA3-204ENST00000521401 A0A0G2JLW4 131 aa28.52■■■□□ 2.16
HOXA3-204ENST00000521401 SNRPA1P09661 255 aaKnown RBP28.52■■■□□ 2.16
HOXA3-204ENST00000521401 THUMPD2Q9BTF0 503 aaKnown RBP28.52■■■□□ 2.16
HOXA3-204ENST00000521401 A0A087WZG4 1122 aa28.51■■■□□ 2.15
HOXA3-204ENST00000521401 KIAA1551Q9HCM1 1747 aa28.51■■■□□ 2.15
HOXA3-204ENST00000521401 DPEP1P16444 411 aa28.5■■■□□ 2.15
HOXA3-204ENST00000521401 CHD4Q14839 1912 aa28.48■■■□□ 2.15
HOXA3-204ENST00000521401 KCNA3P22001 575 aa28.48■■■□□ 2.15
HOXA3-204ENST00000521401 TBC1D2BQ9UPU7 963 aa28.48■■■□□ 2.15
HOXA3-204ENST00000521401 PIP4K2AP48426 406 aaPredicted RBP28.47■■■□□ 2.15
HOXA3-204ENST00000521401 PNISRQ8TF01 805 aaKnown RBP28.47■■■□□ 2.15
HOXA3-204ENST00000521401 ZNF330Q9Y3S2 320 aaPredicted RBP28.47■■■□□ 2.15
HOXA3-204ENST00000521401 TMPOP42166 694 aaKnown RBP28.45■■■□□ 2.14
HOXA3-204ENST00000521401 RIPK4P57078 832 aa28.45■■■□□ 2.14
HOXA3-204ENST00000521401 DLG5Q8TDM6 1919 aa28.45■■■□□ 2.14
HOXA3-204ENST00000521401 CAMTA2O94983 1202 aa28.44■■■□□ 2.14
HOXA3-204ENST00000521401 SERPINB2P05120 415 aa28.44■■■□□ 2.14
HOXA3-204ENST00000521401 NBPF26B4DH59 902 aa28.43■■■□□ 2.14
HOXA3-204ENST00000521401 EIF4A1P60842 406 aaKnown RBP28.43■■■□□ 2.14
HOXA3-204ENST00000521401 TBC1D9BQ66K14 1250 aa28.43■■■□□ 2.14
HOXA3-204ENST00000521401 NBPF10Q6P3W6 841 aaKnown RBP28.43■■■□□ 2.14
HOXA3-204ENST00000521401 CCDC146Q8IYE0 955 aa28.43■■■□□ 2.14
HOXA3-204ENST00000521401 NBPF15Q8N660 670 aa28.43■■■□□ 2.14
HOXA3-204ENST00000521401 ADAMTS8Q9UP79 889 aa28.42■■■□□ 2.14
HOXA3-204ENST00000521401 BCS1LQ9Y276 419 aa28.42■■■□□ 2.14
HOXA3-204ENST00000521401 N4BP2Q86UW6 1770 aaPredicted RBP28.42■■■□□ 2.14
HOXA3-204ENST00000521401 GIGYF1O75420 1035 aaPredicted RBP28.41■■■□□ 2.14
HOXA3-204ENST00000521401 BICDL1Q6ZP65 573 aa28.41■■■□□ 2.14
HOXA3-204ENST00000521401 CHRNA5P30532 468 aa28.4■■■□□ 2.14
HOXA3-204ENST00000521401 WDR43Q15061 677 aaKnown RBP eCLIP28.4■■■□□ 2.14
HOXA3-204ENST00000521401 DZIP3Q86Y13 1208 aaKnown RBP28.4■■■□□ 2.14
HOXA3-204ENST00000521401 RUNDC1Q96C34 613 aa28.39■■■□□ 2.14
HOXA3-204ENST00000521401 RRP7AQ9Y3A4 280 aaKnown RBP28.39■■■□□ 2.14
HOXA3-204ENST00000521401 NRXN2Q9P2S2 1712 aa28.38■■■□□ 2.13
HOXA3-204ENST00000521401 KDM3BQ7LBC6 1761 aa28.38■■■□□ 2.13
HOXA3-204ENST00000521401 NPM2Q86SE8 214 aaKnown RBP28.38■■■□□ 2.13
HOXA3-204ENST00000521401 PIM2Q9P1W9 311 aa28.38■■■□□ 2.13
HOXA3-204ENST00000521401 SCN7AQ01118 1682 aa28.37■■■□□ 2.13
HOXA3-204ENST00000521401 CARMIL3Q8ND23 1372 aa28.37■■■□□ 2.13
HOXA3-204ENST00000521401 LMOD3Q0VAK6 560 aa28.35■■■□□ 2.13
HOXA3-204ENST00000521401 TSPYL4Q9UJ04 414 aa28.35■■■□□ 2.13
HOXA3-204ENST00000521401 ADCY9O60503 1353 aa28.35■■■□□ 2.13
HOXA3-204ENST00000521401 NEUROD2Q15784 382 aa28.34■■■□□ 2.13
HOXA3-204ENST00000521401 TRIM35Q9UPQ4 493 aa28.34■■■□□ 2.13
HOXA3-204ENST00000521401 DALRD3Q5D0E6 543 aaKnown RBP28.33■■■□□ 2.13
HOXA3-204ENST00000521401 BABAM1Q9NWV8 329 aa28.33■■■□□ 2.13
HOXA3-204ENST00000521401 AFDNP55196 1824 aaKnown RBP28.33■■■□□ 2.13
HOXA3-204ENST00000521401 BRCA1P38398 1863 aaKnown RBP28.32■■■□□ 2.12
HOXA3-204ENST00000521401 ZNF316A6NFI3 1004 aaPredicted RBP28.32■■■□□ 2.12
HOXA3-204ENST00000521401 PRR5LQ6MZQ0 368 aa28.32■■■□□ 2.12
HOXA3-204ENST00000521401 CLEC4GQ6UXB4 293 aa28.32■■■□□ 2.12
HOXA3-204ENST00000521401 SETDB2Q96T68 719 aa28.31■■■□□ 2.12
HOXA3-204ENST00000521401 ATP10DQ9P241 1426 aa28.3■■■□□ 2.12
HOXA3-204ENST00000521401 ARHGAP27Q6ZUM4 889 aa28.3■■■□□ 2.12
HOXA3-204ENST00000521401 RGL2O15211 777 aa28.29■■■□□ 2.12
HOXA3-204ENST00000521401 CCDC24Q8N4L8 307 aa28.29■■■□□ 2.12
HOXA3-204ENST00000521401 CCDC184Q52MB2 194 aa28.28■■■□□ 2.12
HOXA3-204ENST00000521401 C2CD5Q86YS7 1000 aa28.28■■■□□ 2.12
HOXA3-204ENST00000521401 BCORQ6W2J9 1755 aa28.28■■■□□ 2.12
HOXA3-204ENST00000521401 LAMB4A4D0S4 1761 aa28.27■■■□□ 2.12
HOXA3-204ENST00000521401 HLFQ16534 295 aa28.27■■■□□ 2.12
HOXA3-204ENST00000521401 BRIP1Q9BX63 1249 aa28.27■■■□□ 2.12
HOXA3-204ENST00000521401 CHL1O00533 1208 aa28.26■■■□□ 2.11
HOXA3-204ENST00000521401 ZNF652Q9Y2D9 606 aa28.26■■■□□ 2.11
HOXA3-204ENST00000521401 NGEFQ8N5V2 710 aa28.25■■■□□ 2.11
HOXA3-204ENST00000521401 H0YIN7 160 aa28.24■■■□□ 2.11
HOXA3-204ENST00000521401 TTLL7Q6ZT98 887 aa28.24■■■□□ 2.11
HOXA3-204ENST00000521401 CNBD1Q8NA66 436 aa28.24■■■□□ 2.11
HOXA3-204ENST00000521401 ERBB4Q15303 1308 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms