RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 DDR1Q08345 913 aa10.63□□□□□ -0.71
CTNNA1-227ENST00000521387 PIGBQ92521 554 aa10.63□□□□□ -0.71
CTNNA1-227ENST00000521387 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-227ENST00000521387 GCC1Q96CN9 775 aa10.63□□□□□ -0.71
CTNNA1-227ENST00000521387 LTV1Q96GA3 475 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-227ENST00000521387 CCDC88AQ3V6T2 1871 aa10.63□□□□□ -0.71
CTNNA1-227ENST00000521387 USP31Q70CQ4 1352 aa10.63□□□□□ -0.71
CTNNA1-227ENST00000521387 ATMINO43313 823 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-227ENST00000521387 CYP4F22Q6NT55 531 aa10.62□□□□□ -0.71
CTNNA1-227ENST00000521387 SMARCC1Q92922 1105 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-227ENST00000521387 CAPNS2Q96L46 248 aa10.62□□□□□ -0.71
CTNNA1-227ENST00000521387 GPR101Q96P66 508 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-227ENST00000521387 TAF1DQ9H5J8 278 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-227ENST00000521387 AOC2O75106 756 aa10.61□□□□□ -0.71
CTNNA1-227ENST00000521387 TRAPPC3LQ5T215 181 aa10.61□□□□□ -0.71
CTNNA1-227ENST00000521387 ASTLQ6HA08 431 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-227ENST00000521387 DCAF11Q8TEB1 546 aa10.61□□□□□ -0.71
CTNNA1-227ENST00000521387 IP6K1Q92551 441 aa10.61□□□□□ -0.71
CTNNA1-227ENST00000521387 BEGAINQ9BUH8 593 aa10.61□□□□□ -0.71
CTNNA1-227ENST00000521387 MNX1P50219 401 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-227ENST00000521387 FMR1Q06787 632 aaKnown RBP eCLIP10.6□□□□□ -0.714e-7■■■■□ 24.3
CTNNA1-227ENST00000521387 MKI67P46013 3256 aaKnown RBP10.6□□□□□ -0.71
CTNNA1-227ENST00000521387 LTN1O94822 1766 aa10.6□□□□□ -0.71
CTNNA1-227ENST00000521387 NBPF1Q3BBV0 1214 aa10.59□□□□□ -0.71
CTNNA1-227ENST00000521387 NME9Q86XW9 330 aa10.59□□□□□ -0.71
CTNNA1-227ENST00000521387 ABT1Q9ULW3 272 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-227ENST00000521387 ADAMTSL1Q8N6G6 1762 aa10.58□□□□□ -0.72
CTNNA1-227ENST00000521387 CYP27B1O15528 508 aa10.58□□□□□ -0.72
CTNNA1-227ENST00000521387 FKBP8Q14318 412 aa10.58□□□□□ -0.72
CTNNA1-227ENST00000521387 ERFEQ4G0M1 354 aa10.58□□□□□ -0.72
CTNNA1-227ENST00000521387 MAP1SQ66K74 1059 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-227ENST00000521387 CNTROBQ8N137 903 aa10.58□□□□□ -0.72
CTNNA1-227ENST00000521387 SLC4A9Q96Q91 983 aa10.58□□□□□ -0.72
CTNNA1-227ENST00000521387 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-227ENST00000521387 C7P10643 843 aa10.57□□□□□ -0.72
CTNNA1-227ENST00000521387 ATP6V1AP38606 617 aa10.57□□□□□ -0.72
CTNNA1-227ENST00000521387 GRM1Q13255 1194 aa10.57□□□□□ -0.72
CTNNA1-227ENST00000521387 SLC39A7Q92504 469 aa10.57□□□□□ -0.72
CTNNA1-227ENST00000521387 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-227ENST00000521387 ASAP1Q9ULH1 1129 aa10.57□□□□□ -0.72
CTNNA1-227ENST00000521387 ITGB4P16144 1822 aa10.56□□□□□ -0.72
CTNNA1-227ENST00000521387 MAP2K2P36507 400 aa10.56□□□□□ -0.72
CTNNA1-227ENST00000521387 NBPF6Q5VWK0 638 aa10.56□□□□□ -0.72
CTNNA1-227ENST00000521387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.56□□□□□ -0.722e-7■■■■□ 19.7
CTNNA1-227ENST00000521387 NBPF4Q96M43 638 aa10.56□□□□□ -0.72
CTNNA1-227ENST00000521387 SRP68Q9UHB9 627 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-227ENST00000521387 RGPD2P0DJD1 1756 aa10.56□□□□□ -0.72
CTNNA1-227ENST00000521387 ADAMTS7Q9UKP4 1686 aa10.56□□□□□ -0.72
CTNNA1-227ENST00000521387 POLRMTO00411 1230 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-227ENST00000521387 CA12O43570 354 aa10.55□□□□□ -0.72
CTNNA1-227ENST00000521387 TM4SF1P30408 202 aa10.55□□□□□ -0.72
CTNNA1-227ENST00000521387 ECE1P42892 770 aa10.55□□□□□ -0.72
CTNNA1-227ENST00000521387 EAPPQ56P03 285 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-227ENST00000521387 CST9Q5W186 159 aa10.55□□□□□ -0.72
CTNNA1-227ENST00000521387 DDX21Q9NR30 783 aaKnown RBP eCLIP10.55□□□□□ -0.72
CTNNA1-227ENST00000521387 CENPJQ9HC77 1338 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-227ENST00000521387 DICER1Q9UPY3 1922 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 COL6A3P12111 3177 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 IQCA1LA6NCM1 817 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 RPS6KA4O75676 772 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 RFC4P35249 363 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 PAXIP1Q6ZW49 1069 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 NBPF15Q8N660 670 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 USHBP1Q8N6Y0 703 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 TTLL6Q8N841 843 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 CD163L1Q9NR16 1453 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 PITPNM2Q9BZ72 1349 aa10.54□□□□□ -0.72
CTNNA1-227ENST00000521387 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-227ENST00000521387 FBLN1P23142 703 aa10.53□□□□□ -0.72
CTNNA1-227ENST00000521387 ZEB1P37275 1124 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-227ENST00000521387 RC3H1Q5TC82 1133 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-227ENST00000521387 SLC17A8Q8NDX2 589 aa10.53□□□□□ -0.72
CTNNA1-227ENST00000521387 ZIC5Q96T25 663 aa10.53□□□□□ -0.72
CTNNA1-227ENST00000521387 ATG3Q9NT62 314 aa10.53□□□□□ -0.72
CTNNA1-227ENST00000521387 CGNL1Q0VF96 1302 aa10.53□□□□□ -0.72
CTNNA1-227ENST00000521387 KDRP35968 1356 aa10.52□□□□□ -0.72
CTNNA1-227ENST00000521387 SBNO2Q9Y2G9 1366 aa10.52□□□□□ -0.72
CTNNA1-227ENST00000521387 SCN4AP35499 1836 aa10.52□□□□□ -0.73
CTNNA1-227ENST00000521387 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
CTNNA1-227ENST00000521387 HOXC9P31274 260 aa10.52□□□□□ -0.73
CTNNA1-227ENST00000521387 ATN1P54259 1190 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-227ENST00000521387 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
CTNNA1-227ENST00000521387 TLL2Q9Y6L7 1015 aa10.52□□□□□ -0.73
CTNNA1-227ENST00000521387 PCDH11XQ9BZA7 1347 aa10.52□□□□□ -0.73
CTNNA1-227ENST00000521387 PCDH11YQ9BZA8 1340 aa10.52□□□□□ -0.73
CTNNA1-227ENST00000521387 EPHX2P34913 555 aa10.51□□□□□ -0.73
CTNNA1-227ENST00000521387 BRPF1P55201 1214 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-227ENST00000521387 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-227ENST00000521387 CIAPIN1Q6FI81 312 aa10.51□□□□□ -0.73
CTNNA1-227ENST00000521387 STAC3Q96MF2 364 aa10.51□□□□□ -0.73
CTNNA1-227ENST00000521387 TRIOBPQ9H2D6 2365 aa10.51□□□□□ -0.73
CTNNA1-227ENST00000521387 MYH14Q7Z406 1995 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-227ENST00000521387 MAP3K19Q56UN5 1328 aa10.5□□□□□ -0.73
CTNNA1-227ENST00000521387 USP42Q9H9J4 1324 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-227ENST00000521387 FER1L6Q2WGJ9 1857 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 POTEFA5A3E0 1075 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 TRAF5O00463 557 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 C21orf2O43822 256 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 RAPGEF4Q8WZA2 1011 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms